RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 TMCC1O94876 653 aa15.34■□□□□ 0.05
UBE3B-212ENST00000540230 GNSP15586 552 aa15.34■□□□□ 0.05
UBE3B-212ENST00000540230 HTR7P34969 479 aa15.34■□□□□ 0.05
UBE3B-212ENST00000540230 YBEYP58557 167 aaPredicted RBP15.34■□□□□ 0.05
UBE3B-212ENST00000540230 DPYSQ14117 519 aa15.34■□□□□ 0.05
UBE3B-212ENST00000540230 DPYSL2Q16555 572 aa15.34■□□□□ 0.05
UBE3B-212ENST00000540230 UAP1L1Q3KQV9 507 aa15.34■□□□□ 0.05
UBE3B-212ENST00000540230 PARP15Q460N3 678 aa15.34■□□□□ 0.05
UBE3B-212ENST00000540230 CARD16Q5EG05 197 aa15.34■□□□□ 0.05
UBE3B-212ENST00000540230 ATXN7L2Q5T6C5 722 aaPredicted RBP15.34■□□□□ 0.05
UBE3B-212ENST00000540230 RABEPKQ7Z6M1 372 aa15.34■□□□□ 0.05
UBE3B-212ENST00000540230 PSTKQ8IV42 348 aaKnown RBP15.34■□□□□ 0.05
UBE3B-212ENST00000540230 ARHGAP12Q8IWW6 846 aa15.34■□□□□ 0.05
UBE3B-212ENST00000540230 MINDY1Q8N5J2 469 aa15.34■□□□□ 0.05
UBE3B-212ENST00000540230 TMIEQ8NEW7 156 aa15.34■□□□□ 0.05
UBE3B-212ENST00000540230 CCDC114Q96M63 670 aa15.34■□□□□ 0.05
UBE3B-212ENST00000540230 TM9SF3Q9HD45 589 aa15.34■□□□□ 0.05
UBE3B-212ENST00000540230 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.34■□□□□ 0.05
UBE3B-212ENST00000540230 ETNK2Q9NVF9 386 aa15.34■□□□□ 0.05
UBE3B-212ENST00000540230 CTTNBP2NLQ9P2B4 639 aa15.34■□□□□ 0.05
UBE3B-212ENST00000540230 HPCAL4Q9UM19 191 aa15.34■□□□□ 0.05
UBE3B-212ENST00000540230 FARP1Q9Y4F1 1045 aaPredicted RBP15.34■□□□□ 0.05
UBE3B-212ENST00000540230 KNL1Q8NG31 2342 aa15.34■□□□□ 0.05
UBE3B-212ENST00000540230 CXorf51AA0A1B0GTR3 108 aa15.33■□□□□ 0.05
UBE3B-212ENST00000540230 MED19A0JLT2 244 aaPredicted RBP15.33■□□□□ 0.05
UBE3B-212ENST00000540230 LRRC72A6NJI9 287 aa15.33■□□□□ 0.05
UBE3B-212ENST00000540230 EIF3CLB5ME19 914 aaKnown RBP15.33■□□□□ 0.05
UBE3B-212ENST00000540230 J3KR12 359 aa15.33■□□□□ 0.05
UBE3B-212ENST00000540230 MYO1FO00160 1098 aa15.33■□□□□ 0.05
UBE3B-212ENST00000540230 WNT9AO14904 365 aa15.33■□□□□ 0.05
UBE3B-212ENST00000540230 H2AFZP0C0S5 128 aa15.33■□□□□ 0.05
UBE3B-212ENST00000540230 CD27P26842 260 aa15.33■□□□□ 0.05
UBE3B-212ENST00000540230 RECQLP46063 649 aaPredicted RBP15.33■□□□□ 0.05
UBE3B-212ENST00000540230 CSNK1EP49674 416 aaKnown RBP15.33■□□□□ 0.05
UBE3B-212ENST00000540230 ZNF75DP51815 510 aa15.33■□□□□ 0.05
UBE3B-212ENST00000540230 SFSWAPQ12872 951 aaKnown RBP15.33■□□□□ 0.05
UBE3B-212ENST00000540230 ARHGAP36Q6ZRI8 547 aa15.33■□□□□ 0.05
UBE3B-212ENST00000540230 H2AFVQ71UI9 128 aa15.33■□□□□ 0.05
UBE3B-212ENST00000540230 CNGA4Q8IV77 575 aa15.33■□□□□ 0.05
UBE3B-212ENST00000540230 CTNNBL1Q8WYA6 563 aaPredicted RBP15.33■□□□□ 0.05
UBE3B-212ENST00000540230 ISG20Q96AZ6 181 aaKnown RBP15.33■□□□□ 0.05
UBE3B-212ENST00000540230 SLC6A18Q96N87 628 aa15.33■□□□□ 0.05
UBE3B-212ENST00000540230 EIF3CQ99613 913 aaKnown RBP15.33■□□□□ 0.05
UBE3B-212ENST00000540230 NCAPGQ9BPX3 1015 aa15.33■□□□□ 0.05
UBE3B-212ENST00000540230 HEPHQ9BQS7 1158 aa15.33■□□□□ 0.05
UBE3B-212ENST00000540230 ZDHHC6Q9H6R6 413 aa15.33■□□□□ 0.05
UBE3B-212ENST00000540230 PDFQ9HBH1 243 aa15.33■□□□□ 0.05
UBE3B-212ENST00000540230 TBC1D3DA0A087WVF3 549 aa15.33■□□□□ 0.04
UBE3B-212ENST00000540230 TBC1D3IA0A087WXS9 549 aa15.33■□□□□ 0.04
UBE3B-212ENST00000540230 TBC1D3EA0A087X179 549 aa15.33■□□□□ 0.04
UBE3B-212ENST00000540230 TBC1D3KA0A087X1G2 549 aa15.33■□□□□ 0.04
UBE3B-212ENST00000540230 A0A1B0GVT2 93 aa15.33■□□□□ 0.04
UBE3B-212ENST00000540230 A0A1W2PPC4 97 aa15.33■□□□□ 0.04
UBE3B-212ENST00000540230 TBC1D3FA6NER0 549 aaPredicted RBP15.33■□□□□ 0.04
UBE3B-212ENST00000540230 TBC1D3LB9A6J9 549 aa15.33■□□□□ 0.04
UBE3B-212ENST00000540230 DAPK3O43293 454 aa15.33■□□□□ 0.04
UBE3B-212ENST00000540230 PRNPP04156 253 aa15.33■□□□□ 0.04
UBE3B-212ENST00000540230 CD48P09326 243 aa15.33■□□□□ 0.04
UBE3B-212ENST00000540230 TMEM253P0C7T8 217 aa15.33■□□□□ 0.04
UBE3B-212ENST00000540230 TBC1D3HP0C7X1 549 aa15.33■□□□□ 0.04
UBE3B-212ENST00000540230 AMPD1P23109 780 aa15.33■□□□□ 0.04
UBE3B-212ENST00000540230 PAPOLAP51003 745 aaKnown RBP15.33■□□□□ 0.04
UBE3B-212ENST00000540230 NDST2P52849 883 aa15.33■□□□□ 0.04
UBE3B-212ENST00000540230 TSR1Q2NL82 804 aaKnown RBP15.33■□□□□ 0.04
UBE3B-212ENST00000540230 ATP13A4Q4VNC1 1196 aa15.33■□□□□ 0.04
UBE3B-212ENST00000540230 AFMIDQ63HM1 303 aa15.33■□□□□ 0.04
UBE3B-212ENST00000540230 TBC1D3GQ6DHY5 549 aa15.33■□□□□ 0.04
UBE3B-212ENST00000540230 TBC1D3CQ6IPX1 549 aa15.33■□□□□ 0.04
UBE3B-212ENST00000540230 ERMP1Q7Z2K6 904 aa15.33■□□□□ 0.04
UBE3B-212ENST00000540230 POLNQ7Z5Q5 900 aa15.33■□□□□ 0.04
UBE3B-212ENST00000540230 TBC1D3Q8IZP1 549 aaPredicted RBP15.33■□□□□ 0.04
UBE3B-212ENST00000540230 OR2AP1Q8NGE2 309 aa15.33■□□□□ 0.04
UBE3B-212ENST00000540230 CCDC42Q96M95 316 aa15.33■□□□□ 0.04
UBE3B-212ENST00000540230 IL21RQ9HBE5 538 aa15.33■□□□□ 0.04
UBE3B-212ENST00000540230 PCDH18Q9HCL0 1135 aa15.33■□□□□ 0.04
UBE3B-212ENST00000540230 SLC7A4O43246 635 aa15.32■□□□□ 0.04
UBE3B-212ENST00000540230 GJB3O75712 270 aa15.32■□□□□ 0.04
UBE3B-212ENST00000540230 PROSCO94903 275 aa15.32■□□□□ 0.04
UBE3B-212ENST00000540230 MAT2AP31153 395 aaKnown RBP15.32■□□□□ 0.04
UBE3B-212ENST00000540230 GJC1P36383 396 aa15.32■□□□□ 0.04
UBE3B-212ENST00000540230 HCAR3P49019 387 aa15.32■□□□□ 0.04
UBE3B-212ENST00000540230 CCR5P51681 352 aa15.32■□□□□ 0.04
UBE3B-212ENST00000540230 ATXN3P54252 364 aaPredicted RBP15.32■□□□□ 0.04
UBE3B-212ENST00000540230 GEMIN4P57678 1058 aaKnown RBP15.32■□□□□ 0.04
UBE3B-212ENST00000540230 TAS2R40P59535 323 aa15.32■□□□□ 0.04
UBE3B-212ENST00000540230 CYTH1Q15438 398 aa15.32■□□□□ 0.04
UBE3B-212ENST00000540230 BOLA3Q53S33 107 aa15.32■□□□□ 0.04
UBE3B-212ENST00000540230 PPM1JQ5JR12 505 aa15.32■□□□□ 0.04
UBE3B-212ENST00000540230 RYBPQ8N488 228 aaPredicted RBP15.32■□□□□ 0.04
UBE3B-212ENST00000540230 TEKT4Q8WW24 435 aa15.32■□□□□ 0.04
UBE3B-212ENST00000540230 TSC1Q92574 1164 aa15.32■□□□□ 0.04
UBE3B-212ENST00000540230 EXOC2Q96KP1 924 aa15.32■□□□□ 0.04
UBE3B-212ENST00000540230 CSPG4P5Q96PW8 444 aa15.32■□□□□ 0.04
UBE3B-212ENST00000540230 KLHL11Q9NVR0 708 aa15.32■□□□□ 0.04
UBE3B-212ENST00000540230 UVRAGQ9P2Y5 699 aa15.32■□□□□ 0.04
UBE3B-212ENST00000540230 LHX3Q9UBR4 397 aa15.32■□□□□ 0.04
UBE3B-212ENST00000540230 ZSCAN5CA6NGD5 496 aaPredicted RBP15.31■□□□□ 0.04
UBE3B-212ENST00000540230 H3BRJ5 948 aa15.31■□□□□ 0.04
UBE3B-212ENST00000540230 GIPC1O14908 333 aa15.31■□□□□ 0.04
UBE3B-212ENST00000540230 INSIG1O15503 277 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms