RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 FSBPO95073 299 aa18.62■□□□□ 0.57
SNRPA1-203ENST00000540017 CFIP05156 583 aa18.62■□□□□ 0.57
SNRPA1-203ENST00000540017 ARL4AP40617 200 aa18.62■□□□□ 0.57
SNRPA1-203ENST00000540017 DPP6P42658 865 aa18.62■□□□□ 0.57
SNRPA1-203ENST00000540017 RECQLP46063 649 aaPredicted RBP18.62■□□□□ 0.57
SNRPA1-203ENST00000540017 CCNHP51946 323 aaPredicted RBP18.62■□□□□ 0.57
SNRPA1-203ENST00000540017 CDH6P55285 790 aa18.62■□□□□ 0.57
SNRPA1-203ENST00000540017 GEMIN4P57678 1058 aaKnown RBP18.62■□□□□ 0.57
SNRPA1-203ENST00000540017 ARHGAP8P85298 464 aa18.62■□□□□ 0.57
SNRPA1-203ENST00000540017 SFSWAPQ12872 951 aaKnown RBP18.62■□□□□ 0.57
SNRPA1-203ENST00000540017 CYTH1Q15438 398 aa18.62■□□□□ 0.57
SNRPA1-203ENST00000540017 HADHQ16836 314 aaKnown RBP18.62■□□□□ 0.57
SNRPA1-203ENST00000540017 DUOXA1Q1HG43 343 aa18.62■□□□□ 0.57
SNRPA1-203ENST00000540017 ATXN7L2Q5T6C5 722 aaPredicted RBP18.62■□□□□ 0.57
SNRPA1-203ENST00000540017 CCDC170Q8IYT3 715 aa18.62■□□□□ 0.57
SNRPA1-203ENST00000540017 OR6K2Q8NGY2 324 aa18.62■□□□□ 0.57
SNRPA1-203ENST00000540017 OR14C36Q8NHC7 312 aa18.62■□□□□ 0.57
SNRPA1-203ENST00000540017 RFFLQ8WZ73 363 aa18.62■□□□□ 0.57
SNRPA1-203ENST00000540017 SNX19Q92543 992 aa18.62■□□□□ 0.57
SNRPA1-203ENST00000540017 HEPHQ9BQS7 1158 aa18.62■□□□□ 0.57
SNRPA1-203ENST00000540017 ORAI3Q9BRQ5 295 aa18.62■□□□□ 0.57
SNRPA1-203ENST00000540017 EDEM2Q9BV94 578 aa18.62■□□□□ 0.57
SNRPA1-203ENST00000540017 MIR1-1HGQ9H1L0 117 aa18.62■□□□□ 0.57
SNRPA1-203ENST00000540017 CAPN10Q9HC96 672 aa18.62■□□□□ 0.57
SNRPA1-203ENST00000540017 KLHL11Q9NVR0 708 aa18.62■□□□□ 0.57
SNRPA1-203ENST00000540017 DONSONQ9NYP3 566 aa18.62■□□□□ 0.57
SNRPA1-203ENST00000540017 HECAQ9UBI9 543 aaPredicted RBP18.62■□□□□ 0.57
SNRPA1-203ENST00000540017 CEP250Q9BV73 2442 aa18.61■□□□□ 0.57
SNRPA1-203ENST00000540017 PI4KAP42356 2102 aa18.61■□□□□ 0.57
SNRPA1-203ENST00000540017 ARHGAP42A6NI28 874 aa18.61■□□□□ 0.57
SNRPA1-203ENST00000540017 PRAMEF11O60813 436 aa18.61■□□□□ 0.57
SNRPA1-203ENST00000540017 PRNPP04156 253 aa18.61■□□□□ 0.57
SNRPA1-203ENST00000540017 SERPINF2P08697 491 aa18.61■□□□□ 0.57
SNRPA1-203ENST00000540017 MAN1A1P33908 653 aa18.61■□□□□ 0.57
SNRPA1-203ENST00000540017 MAGEA1P43355 309 aa18.61■□□□□ 0.57
SNRPA1-203ENST00000540017 TAS2R38P59533 333 aa18.61■□□□□ 0.57
SNRPA1-203ENST00000540017 TCEAL1Q15170 157 aa18.61■□□□□ 0.57
SNRPA1-203ENST00000540017 INO80DQ53TQ3 878 aaPredicted RBP18.61■□□□□ 0.57
SNRPA1-203ENST00000540017 PIP5KL1Q5T9C9 394 aa18.61■□□□□ 0.57
SNRPA1-203ENST00000540017 KIAA0895LQ68EN5 471 aa18.61■□□□□ 0.57
SNRPA1-203ENST00000540017 RHOT2Q8IXI1 618 aa18.61■□□□□ 0.57
SNRPA1-203ENST00000540017 PLPP6Q8IY26 295 aa18.61■□□□□ 0.57
SNRPA1-203ENST00000540017 ZCCHC9Q8N567 271 aaKnown RBP18.61■□□□□ 0.57
SNRPA1-203ENST00000540017 OR2T34Q8NGX1 318 aa18.61■□□□□ 0.57
SNRPA1-203ENST00000540017 EBF2Q9HAK2 575 aa18.61■□□□□ 0.57
SNRPA1-203ENST00000540017 DLL3Q9NYJ7 618 aa18.61■□□□□ 0.57
SNRPA1-203ENST00000540017 LHX3Q9UBR4 397 aa18.61■□□□□ 0.57
SNRPA1-203ENST00000540017 SLC6A14Q9UN76 642 aa18.61■□□□□ 0.57
SNRPA1-203ENST00000540017 DFFAO00273 331 aa18.6■□□□□ 0.57
SNRPA1-203ENST00000540017 CDX4O14627 284 aaPredicted RBP18.6■□□□□ 0.57
SNRPA1-203ENST00000540017 PLRG1O43660 514 aaKnown RBP18.6■□□□□ 0.57
SNRPA1-203ENST00000540017 GSRP00390 522 aa18.6■□□□□ 0.57
SNRPA1-203ENST00000540017 CDC25BP30305 580 aa18.6■□□□□ 0.57
SNRPA1-203ENST00000540017 ID4P47928 161 aa18.6■□□□□ 0.57
SNRPA1-203ENST00000540017 PPP2CBP62714 309 aa18.6■□□□□ 0.57
SNRPA1-203ENST00000540017 PPP2CAP67775 309 aa18.6■□□□□ 0.57
SNRPA1-203ENST00000540017 DPYSL3Q14195 570 aa18.6■□□□□ 0.57
SNRPA1-203ENST00000540017 KRT81Q14533 505 aa18.6■□□□□ 0.57
SNRPA1-203ENST00000540017 STPG1Q5TH74 334 aa18.6■□□□□ 0.57
SNRPA1-203ENST00000540017 RAD9BQ6WBX8 426 aa18.6■□□□□ 0.57
SNRPA1-203ENST00000540017 SPC24Q8NBT2 197 aa18.6■□□□□ 0.57
SNRPA1-203ENST00000540017 OR2AP1Q8NGE2 309 aa18.6■□□□□ 0.57
SNRPA1-203ENST00000540017 CEP76Q8TAP6 659 aa18.6■□□□□ 0.57
SNRPA1-203ENST00000540017 NETO1Q8TDF5 533 aa18.6■□□□□ 0.57
SNRPA1-203ENST00000540017 NUSAP1Q9BXS6 441 aaKnown RBP18.6■□□□□ 0.57
SNRPA1-203ENST00000540017 ZDHHC6Q9H6R6 413 aa18.6■□□□□ 0.57
SNRPA1-203ENST00000540017 UBA2Q9UBT2 640 aaPredicted RBP18.6■□□□□ 0.57
SNRPA1-203ENST00000540017 LCMT1Q9UIC8 334 aa18.6■□□□□ 0.57
SNRPA1-203ENST00000540017 PCDHA13Q9Y5I0 950 aa18.6■□□□□ 0.57
SNRPA1-203ENST00000540017 PCDH15Q96QU1 1955 aa18.6■□□□□ 0.57
SNRPA1-203ENST00000540017 DNAH14Q0VDD8 3507 aa18.6■□□□□ 0.57
SNRPA1-203ENST00000540017 ADAMTS9Q9P2N4 1935 aa18.6■□□□□ 0.57
SNRPA1-203ENST00000540017 SPTBN4Q9H254 2564 aa18.6■□□□□ 0.57
SNRPA1-203ENST00000540017 RCCD1A6NED2 376 aa18.59■□□□□ 0.57
SNRPA1-203ENST00000540017 LRRC72A6NJI9 287 aa18.59■□□□□ 0.57
SNRPA1-203ENST00000540017 KRIT1O00522 736 aa18.59■□□□□ 0.57
SNRPA1-203ENST00000540017 ENGP17813 658 aa18.59■□□□□ 0.57
SNRPA1-203ENST00000540017 ARHGAP25P42331 645 aa18.59■□□□□ 0.57
SNRPA1-203ENST00000540017 SNRPD1P62314 119 aaKnown RBP18.59■□□□□ 0.57
SNRPA1-203ENST00000540017 MYLK3Q32MK0 819 aa18.59■□□□□ 0.57
SNRPA1-203ENST00000540017 TMCO3Q6UWJ1 677 aa18.59■□□□□ 0.57
SNRPA1-203ENST00000540017 TMEM139Q8IV31 216 aa18.59■□□□□ 0.57
SNRPA1-203ENST00000540017 RYBPQ8N488 228 aaPredicted RBP18.59■□□□□ 0.57
SNRPA1-203ENST00000540017 LZTR1Q8N653 840 aa18.59■□□□□ 0.57
SNRPA1-203ENST00000540017 CASKIN2Q8WXE0 1202 aa18.59■□□□□ 0.57
SNRPA1-203ENST00000540017 CDV3Q9UKY7 258 aaKnown RBP18.59■□□□□ 0.57
SNRPA1-203ENST00000540017 REXO2Q9Y3B8 237 aaKnown RBP18.59■□□□□ 0.57
SNRPA1-203ENST00000540017 HYOU1Q9Y4L1 999 aa18.59■□□□□ 0.57
SNRPA1-203ENST00000540017 EPN1Q9Y6I3 576 aaPredicted RBP18.59■□□□□ 0.57
SNRPA1-203ENST00000540017 TBC1D3DA0A087WVF3 549 aa18.58■□□□□ 0.56
SNRPA1-203ENST00000540017 TBC1D3IA0A087WXS9 549 aa18.58■□□□□ 0.56
SNRPA1-203ENST00000540017 TBC1D3EA0A087X179 549 aa18.58■□□□□ 0.56
SNRPA1-203ENST00000540017 TBC1D3KA0A087X1G2 549 aa18.58■□□□□ 0.56
SNRPA1-203ENST00000540017 A0A1B0GTW7 788 aa18.58■□□□□ 0.56
SNRPA1-203ENST00000540017 TBC1D3FA6NER0 549 aaPredicted RBP18.58■□□□□ 0.56
SNRPA1-203ENST00000540017 C4orf47A7E2U8 309 aa18.58■□□□□ 0.56
SNRPA1-203ENST00000540017 TBC1D3LB9A6J9 549 aa18.58■□□□□ 0.56
SNRPA1-203ENST00000540017 SLC30A4O14863 429 aa18.58■□□□□ 0.56
SNRPA1-203ENST00000540017 BCAT2O15382 392 aaPredicted RBP18.58■□□□□ 0.56
SNRPA1-203ENST00000540017 INSIG1O15503 277 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms