RNA–Protein interactions for RNA: ENST00000539960.1

PRPF19-204, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 796 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-204ENST00000539960 BTBD1Q9H0C5 482 aa13.66□□□□□ -0.22
PRPF19-204ENST00000539960 ARRDC1-AS1Q9H2J1 176 aa13.66□□□□□ -0.22
PRPF19-204ENST00000539960 SGK2Q9HBY8 427 aa13.66□□□□□ -0.22
PRPF19-204ENST00000539960 SERGEFQ9UGK8 458 aa13.66□□□□□ -0.22
PRPF19-204ENST00000539960 IL36AQ9UHA7 158 aa13.66□□□□□ -0.22
PRPF19-204ENST00000539960 FZD4Q9ULV1 537 aa13.66□□□□□ -0.22
PRPF19-204ENST00000539960 EP300Q09472 2414 aaPredicted RBP13.66□□□□□ -0.22
PRPF19-204ENST00000539960 PTPRZ1P23471 2315 aaPredicted RBP13.65□□□□□ -0.22
PRPF19-204ENST00000539960 A0A0U1RQJ8 604 aa13.65□□□□□ -0.22
PRPF19-204ENST00000539960 METTL12A8MUP2 240 aa13.65□□□□□ -0.22
PRPF19-204ENST00000539960 PSTPIP1O43586 416 aa13.65□□□□□ -0.22
PRPF19-204ENST00000539960 LRP3O75074 770 aa13.65□□□□□ -0.22
PRPF19-204ENST00000539960 LEFTY1O75610 366 aa13.65□□□□□ -0.22
PRPF19-204ENST00000539960 PALMO75781 387 aa13.65□□□□□ -0.22
PRPF19-204ENST00000539960 TGM1P22735 817 aa13.65□□□□□ -0.22
PRPF19-204ENST00000539960 DRD3P35462 400 aa13.65□□□□□ -0.22
PRPF19-204ENST00000539960 CCNHP51946 323 aaPredicted RBP13.65□□□□□ -0.22
PRPF19-204ENST00000539960 METAP1P53582 386 aa13.65□□□□□ -0.22
PRPF19-204ENST00000539960 RHOAP61586 193 aa13.65□□□□□ -0.22
PRPF19-204ENST00000539960 CREB5Q02930 508 aa13.65□□□□□ -0.22
PRPF19-204ENST00000539960 SPEM2Q0P670 501 aa13.65□□□□□ -0.22
PRPF19-204ENST00000539960 RFTN1Q14699 578 aaPredicted RBP13.65□□□□□ -0.22
PRPF19-204ENST00000539960 IFI16Q16666 785 aaKnown RBP13.65□□□□□ -0.22
PRPF19-204ENST00000539960 ODF2Q5BJF6 829 aa13.65□□□□□ -0.22
PRPF19-204ENST00000539960 LYSMD4Q5XG99 296 aa13.65□□□□□ -0.22
PRPF19-204ENST00000539960 NCBP2-AS2Q69YL0 99 aa13.65□□□□□ -0.22
PRPF19-204ENST00000539960 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.65□□□□□ -0.22
PRPF19-204ENST00000539960 RCOR2Q8IZ40 523 aa13.65□□□□□ -0.22
PRPF19-204ENST00000539960 RYBPQ8N488 228 aaPredicted RBP13.65□□□□□ -0.22
PRPF19-204ENST00000539960 LRIG1Q96JA1 1093 aa13.65□□□□□ -0.22
PRPF19-204ENST00000539960 ZNF599Q96NL3 588 aa13.65□□□□□ -0.22
PRPF19-204ENST00000539960 MAK16Q9BXY0 300 aaKnown RBP13.65□□□□□ -0.22
PRPF19-204ENST00000539960 PCED1AQ9H1Q7 454 aa13.65□□□□□ -0.22
PRPF19-204ENST00000539960 TRIM10Q9UDY6 481 aa13.65□□□□□ -0.22
PRPF19-204ENST00000539960 WASF2Q9Y6W5 498 aa13.65□□□□□ -0.22
PRPF19-204ENST00000539960 OTOGLQ3ZCN5 2332 aa13.65□□□□□ -0.22
PRPF19-204ENST00000539960 CHD5Q8TDI0 1954 aa13.65□□□□□ -0.22
PRPF19-204ENST00000539960 NUP205Q92621 2012 aa13.64□□□□□ -0.23
PRPF19-204ENST00000539960 RNF103O00237 685 aa13.64□□□□□ -0.23
PRPF19-204ENST00000539960 PLK4O00444 970 aa13.64□□□□□ -0.23
PRPF19-204ENST00000539960 KPNA3O00505 521 aaPredicted RBP13.64□□□□□ -0.23
PRPF19-204ENST00000539960 MAFKO60675 156 aa13.64□□□□□ -0.23
PRPF19-204ENST00000539960 ZRANB2O95218 330 aaKnown RBP eCLIP13.64□□□□□ -0.23
PRPF19-204ENST00000539960 SEMA4FO95754 770 aa13.64□□□□□ -0.23
PRPF19-204ENST00000539960 KRT1P04264 644 aa13.64□□□□□ -0.23
PRPF19-204ENST00000539960 ITPKAP23677 461 aa13.64□□□□□ -0.23
PRPF19-204ENST00000539960 GKP32189 559 aa13.64□□□□□ -0.23
PRPF19-204ENST00000539960 RAD51Q06609 339 aa13.64□□□□□ -0.23
PRPF19-204ENST00000539960 CCDC15Q0P6D6 951 aa13.64□□□□□ -0.23
PRPF19-204ENST00000539960 CNTN1Q12860 1018 aa13.64□□□□□ -0.23
PRPF19-204ENST00000539960 TAZQ16635 292 aa13.64□□□□□ -0.23
PRPF19-204ENST00000539960 POM121L1PQ3SYA9 428 aa13.64□□□□□ -0.23
PRPF19-204ENST00000539960 PLA2G2CQ5R387 149 aa13.64□□□□□ -0.23
PRPF19-204ENST00000539960 SYCP2LQ5T4T6 812 aa13.64□□□□□ -0.23
PRPF19-204ENST00000539960 ATXN7L2Q5T6C5 722 aaPredicted RBP13.64□□□□□ -0.23
PRPF19-204ENST00000539960 MFSD7Q6UXD7 560 aa13.64□□□□□ -0.23
PRPF19-204ENST00000539960 ARMCX6Q7L4S7 300 aa13.64□□□□□ -0.23
PRPF19-204ENST00000539960 CYP2U1Q7Z449 544 aa13.64□□□□□ -0.23
PRPF19-204ENST00000539960 SYT12Q8IV01 421 aa13.64□□□□□ -0.23
PRPF19-204ENST00000539960 RNF10Q8N5U6 811 aaKnown RBP13.64□□□□□ -0.23
PRPF19-204ENST00000539960 GPR161Q8N6U8 529 aaKnown RBP13.64□□□□□ -0.23
PRPF19-204ENST00000539960 LRRC57Q8N9N7 239 aa13.64□□□□□ -0.23
PRPF19-204ENST00000539960 GRIN3AQ8TCU5 1115 aa13.64□□□□□ -0.23
PRPF19-204ENST00000539960 PIGKQ92643 395 aa13.64□□□□□ -0.23
PRPF19-204ENST00000539960 FAM131CQ96AQ9 280 aa13.64□□□□□ -0.23
PRPF19-204ENST00000539960 VOPP1Q96AW1 172 aa13.64□□□□□ -0.23
PRPF19-204ENST00000539960 HSPA12BQ96MM6 686 aa13.64□□□□□ -0.23
PRPF19-204ENST00000539960 GDAP1L1Q96MZ0 367 aa13.64□□□□□ -0.23
PRPF19-204ENST00000539960 C6orf106Q9H6K1 298 aaPredicted RBP13.64□□□□□ -0.23
PRPF19-204ENST00000539960 SP110Q9HB58 689 aa13.64□□□□□ -0.23
PRPF19-204ENST00000539960 LHX3Q9UBR4 397 aa13.64□□□□□ -0.23
PRPF19-204ENST00000539960 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.64□□□□□ -0.23
PRPF19-204ENST00000539960 PCDHA3Q9Y5H8 950 aa13.64□□□□□ -0.23
PRPF19-204ENST00000539960 MACROD2A1Z1Q3 448 aa13.63□□□□□ -0.23
PRPF19-204ENST00000539960 GRID2IPA4D2P6 1211 aa13.63□□□□□ -0.23
PRPF19-204ENST00000539960 LRRC72A6NJI9 287 aa13.63□□□□□ -0.23
PRPF19-204ENST00000539960 KRIT1O00522 736 aa13.63□□□□□ -0.23
PRPF19-204ENST00000539960 SLC7A4O43246 635 aa13.63□□□□□ -0.23
PRPF19-204ENST00000539960 MFSD11O43934 449 aa13.63□□□□□ -0.23
PRPF19-204ENST00000539960 IGSF6O95976 241 aa13.63□□□□□ -0.23
PRPF19-204ENST00000539960 PEX11BO96011 259 aa13.63□□□□□ -0.23
PRPF19-204ENST00000539960 ZNF806P0C7X5 589 aa13.63□□□□□ -0.23
PRPF19-204ENST00000539960 MPLP40238 635 aa13.63□□□□□ -0.23
PRPF19-204ENST00000539960 DPP6P42658 865 aa13.63□□□□□ -0.23
PRPF19-204ENST00000539960 CDKN2BP42772 138 aa13.63□□□□□ -0.23
PRPF19-204ENST00000539960 CCZ1BP86790 482 aa13.63□□□□□ -0.23
PRPF19-204ENST00000539960 CCZ1P86791 482 aaPredicted RBP13.63□□□□□ -0.23
PRPF19-204ENST00000539960 GBE1Q04446 702 aa13.63□□□□□ -0.23
PRPF19-204ENST00000539960 NSUN2Q08J23 767 aaKnown RBP eCLIP13.63□□□□□ -0.23
PRPF19-204ENST00000539960 SLC10A7Q0GE19 358 aa13.63□□□□□ -0.23
PRPF19-204ENST00000539960 GALNT2Q10471 571 aa13.63□□□□□ -0.23
PRPF19-204ENST00000539960 SLC10A2Q12908 348 aaPredicted RBP13.63□□□□□ -0.23
PRPF19-204ENST00000539960 LBRQ14739 615 aaKnown RBP13.63□□□□□ -0.23
PRPF19-204ENST00000539960 CSRP2Q16527 193 aa13.63□□□□□ -0.23
PRPF19-204ENST00000539960 WDR45BQ5MNZ6 344 aa13.63□□□□□ -0.23
PRPF19-204ENST00000539960 TMCO4Q5TGY1 634 aa13.63□□□□□ -0.23
PRPF19-204ENST00000539960 SLC9A4Q6AI14 798 aa13.63□□□□□ -0.23
PRPF19-204ENST00000539960 KATNAL2Q8IYT4 538 aa13.63□□□□□ -0.23
PRPF19-204ENST00000539960 ATPAF2Q8N5M1 289 aa13.63□□□□□ -0.23
PRPF19-204ENST00000539960 OR6K2Q8NGY2 324 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms