RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 MMP2P08253 660 aa22.78■■□□□ 1.24
HOMER3-204ENST00000539827 F7P08709 466 aaPredicted RBP22.78■■□□□ 1.24
HOMER3-204ENST00000539827 BMPR1AP36894 532 aa22.78■■□□□ 1.24
HOMER3-204ENST00000539827 ZXDBP98169 803 aa22.78■■□□□ 1.24
HOMER3-204ENST00000539827 NAB1Q13506 487 aa22.78■■□□□ 1.24
HOMER3-204ENST00000539827 PCID2Q5JVF3 399 aa22.78■■□□□ 1.24
HOMER3-204ENST00000539827 TMCO4Q5TGY1 634 aa22.78■■□□□ 1.24
HOMER3-204ENST00000539827 TMC8Q8IU68 726 aa22.78■■□□□ 1.24
HOMER3-204ENST00000539827 HERVK_113Q902F9 699 aa22.78■■□□□ 1.24
HOMER3-204ENST00000539827 MTBPQ96DY7 904 aa22.78■■□□□ 1.24
HOMER3-204ENST00000539827 SEC16BQ96JE7 1060 aa22.78■■□□□ 1.24
HOMER3-204ENST00000539827 PDFQ9HBH1 243 aa22.78■■□□□ 1.24
HOMER3-204ENST00000539827 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.78■■□□□ 1.24
HOMER3-204ENST00000539827 GJB3O75712 270 aa22.78■■□□□ 1.24
HOMER3-204ENST00000539827 GJA1P17302 382 aa22.78■■□□□ 1.24
HOMER3-204ENST00000539827 TAC1P20366 129 aa22.78■■□□□ 1.24
HOMER3-204ENST00000539827 GLDCP23378 1020 aa22.78■■□□□ 1.24
HOMER3-204ENST00000539827 ADRA1DP25100 572 aa22.78■■□□□ 1.24
HOMER3-204ENST00000539827 DNAJB1P25685 340 aa22.78■■□□□ 1.24
HOMER3-204ENST00000539827 HOXD9P28356 352 aaPredicted RBP22.78■■□□□ 1.24
HOMER3-204ENST00000539827 NEK3P51956 506 aa22.78■■□□□ 1.24
HOMER3-204ENST00000539827 ZNF177Q13360 481 aaPredicted RBP22.78■■□□□ 1.24
HOMER3-204ENST00000539827 RANBP10Q6VN20 620 aa22.78■■□□□ 1.24
HOMER3-204ENST00000539827 CCDC149Q6ZUS6 474 aa22.78■■□□□ 1.24
HOMER3-204ENST00000539827 ARRDC2Q8TBH0 407 aa22.78■■□□□ 1.24
HOMER3-204ENST00000539827 DDX50Q9BQ39 737 aaKnown RBP22.78■■□□□ 1.24
HOMER3-204ENST00000539827 KIFC1Q9BW19 673 aa22.78■■□□□ 1.24
HOMER3-204ENST00000539827 LRRC3Q9BY71 257 aa22.78■■□□□ 1.24
HOMER3-204ENST00000539827 C20orf96Q9NUD7 363 aaPredicted RBP22.78■■□□□ 1.24
HOMER3-204ENST00000539827 FGFR1OP2Q9NVK5 253 aa22.78■■□□□ 1.24
HOMER3-204ENST00000539827 NRG2O14511 850 aaPredicted RBP22.77■■□□□ 1.24
HOMER3-204ENST00000539827 MUSKO15146 869 aa22.77■■□□□ 1.24
HOMER3-204ENST00000539827 TNK2Q07912 1038 aa22.77■■□□□ 1.24
HOMER3-204ENST00000539827 ZKSCAN8Q15776 578 aaPredicted RBP22.77■■□□□ 1.24
HOMER3-204ENST00000539827 PKN3Q6P5Z2 889 aa22.77■■□□□ 1.24
HOMER3-204ENST00000539827 SPRED2Q7Z698 418 aa22.77■■□□□ 1.24
HOMER3-204ENST00000539827 MAB21L3Q8N8X9 362 aa22.77■■□□□ 1.24
HOMER3-204ENST00000539827 SLC22A17Q8WUG5 538 aa22.77■■□□□ 1.24
HOMER3-204ENST00000539827 MRPS31Q92665 395 aaKnown RBP22.77■■□□□ 1.24
HOMER3-204ENST00000539827 AGAP2Q99490 1192 aa22.77■■□□□ 1.24
HOMER3-204ENST00000539827 ELAC2Q9BQ52 826 aaKnown RBP22.77■■□□□ 1.24
HOMER3-204ENST00000539827 EMILIN2Q9BXX0 1053 aa22.77■■□□□ 1.24
HOMER3-204ENST00000539827 WDR91A4D1P6 747 aa22.76■■□□□ 1.23
HOMER3-204ENST00000539827 COPEO14579 308 aa22.76■■□□□ 1.23
HOMER3-204ENST00000539827 CCL16O15467 120 aa22.76■■□□□ 1.23
HOMER3-204ENST00000539827 OXCT1P55809 520 aa22.76■■□□□ 1.23
HOMER3-204ENST00000539827 ZNF235Q14590 738 aa22.76■■□□□ 1.23
HOMER3-204ENST00000539827 HSP90AA5PQ58FG0 334 aa22.76■■□□□ 1.23
HOMER3-204ENST00000539827 CHST9Q7L1S5 443 aa22.76■■□□□ 1.23
HOMER3-204ENST00000539827 KCNMB4Q86W47 210 aa22.76■■□□□ 1.23
HOMER3-204ENST00000539827 POF1BQ8WVV4 589 aa22.76■■□□□ 1.23
HOMER3-204ENST00000539827 NSRP1Q9H0G5 558 aaKnown RBP22.76■■□□□ 1.23
HOMER3-204ENST00000539827 RETREG1Q9H6L5 497 aa22.76■■□□□ 1.23
HOMER3-204ENST00000539827 MYLKQ15746 1914 aa22.76■■□□□ 1.23
HOMER3-204ENST00000539827 A0A1B0GVM2 712 aa22.76■■□□□ 1.23
HOMER3-204ENST00000539827 TCAF2A6NFQ2 919 aa22.76■■□□□ 1.23
HOMER3-204ENST00000539827 GOLGA8TH3BQL2 631 aa22.76■■□□□ 1.23
HOMER3-204ENST00000539827 TM9SF1O15321 606 aa22.76■■□□□ 1.23
HOMER3-204ENST00000539827 TBL1XO60907 577 aa22.76■■□□□ 1.23
HOMER3-204ENST00000539827 OLFM2O95897 454 aa22.76■■□□□ 1.23
HOMER3-204ENST00000539827 MYL4P12829 197 aa22.76■■□□□ 1.23
HOMER3-204ENST00000539827 FRG1Q14331 258 aaKnown RBP22.76■■□□□ 1.23
HOMER3-204ENST00000539827 TEDDM1Q5T9Z0 273 aa22.76■■□□□ 1.23
HOMER3-204ENST00000539827 GKAP1Q5VSY0 366 aaPredicted RBP22.76■■□□□ 1.23
HOMER3-204ENST00000539827 CDHR3Q6ZTQ4 885 aa22.76■■□□□ 1.23
HOMER3-204ENST00000539827 PPHLN1Q8NEY8 458 aaKnown RBP22.76■■□□□ 1.23
HOMER3-204ENST00000539827 SEMA3CQ99985 751 aa22.76■■□□□ 1.23
HOMER3-204ENST00000539827 CORO1BQ9BR76 489 aa22.76■■□□□ 1.23
HOMER3-204ENST00000539827 SLC13A1Q9BZW2 595 aa22.76■■□□□ 1.23
HOMER3-204ENST00000539827 IARS2Q9NSE4 1012 aaKnown RBP22.76■■□□□ 1.23
HOMER3-204ENST00000539827 PCMTD2Q9NV79 361 aa22.76■■□□□ 1.23
HOMER3-204ENST00000539827 TXNDC16Q9P2K2 825 aa22.76■■□□□ 1.23
HOMER3-204ENST00000539827 C2orf71A6NGG8 1288 aa22.75■■□□□ 1.23
HOMER3-204ENST00000539827 GREM1O60565 184 aa22.75■■□□□ 1.23
HOMER3-204ENST00000539827 GLUD1P00367 558 aa22.75■■□□□ 1.23
HOMER3-204ENST00000539827 CNTFP26441 200 aa22.75■■□□□ 1.23
HOMER3-204ENST00000539827 CCNFP41002 786 aa22.75■■□□□ 1.23
HOMER3-204ENST00000539827 SEPT6Q14141 434 aa22.75■■□□□ 1.23
HOMER3-204ENST00000539827 RNF219Q5W0B1 726 aaPredicted RBP22.75■■□□□ 1.23
HOMER3-204ENST00000539827 ZNF449Q6P9G9 518 aa22.75■■□□□ 1.23
HOMER3-204ENST00000539827 ELMOD1Q8N336 334 aa22.75■■□□□ 1.23
HOMER3-204ENST00000539827 SPPL3Q8TCT6 385 aa22.75■■□□□ 1.23
HOMER3-204ENST00000539827 SPOCK2Q92563 424 aa22.75■■□□□ 1.23
HOMER3-204ENST00000539827 FAM111AQ96PZ2 611 aa22.75■■□□□ 1.23
HOMER3-204ENST00000539827 C17orf80Q9BSJ5 609 aa22.75■■□□□ 1.23
HOMER3-204ENST00000539827 ATP13A1Q9HD20 1204 aa22.75■■□□□ 1.23
HOMER3-204ENST00000539827 STOML2Q9UJZ1 356 aa22.75■■□□□ 1.23
HOMER3-204ENST00000539827 TCAF1Q9Y4C2 921 aa22.75■■□□□ 1.23
HOMER3-204ENST00000539827 CHD5Q8TDI0 1954 aa22.75■■□□□ 1.23
HOMER3-204ENST00000539827 A0A1W2PRU2 124 aa22.74■■□□□ 1.23
HOMER3-204ENST00000539827 ILVBLA1L0T0 632 aa22.74■■□□□ 1.23
HOMER3-204ENST00000539827 KDELR3O43731 214 aa22.74■■□□□ 1.23
HOMER3-204ENST00000539827 GP5P40197 560 aa22.74■■□□□ 1.23
HOMER3-204ENST00000539827 STXBP5Q5T5C0 1151 aa22.74■■□□□ 1.23
HOMER3-204ENST00000539827 POTEHQ6S545 545 aa22.74■■□□□ 1.23
HOMER3-204ENST00000539827 TIFABQ6ZNK6 161 aa22.74■■□□□ 1.23
HOMER3-204ENST00000539827 PIGWQ7Z7B1 504 aa22.74■■□□□ 1.23
HOMER3-204ENST00000539827 STRA8Q7Z7C7 330 aa22.74■■□□□ 1.23
HOMER3-204ENST00000539827 CACNA2D3Q8IZS8 1091 aa22.74■■□□□ 1.23
HOMER3-204ENST00000539827 CARNMT1Q8N4J0 409 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms