RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 SETMARQ53H47 684 aaPredicted RBP11.78□□□□□ -0.52
RTN3-209ENST00000538995 TDRD12Q587J7 1177 aaKnown RBP11.78□□□□□ -0.52
RTN3-209ENST00000538995 HGSNATQ68CP4 663 aa11.78□□□□□ -0.52
RTN3-209ENST00000538995 ERN2Q76MJ5 926 aaKnown RBP11.78□□□□□ -0.52
RTN3-209ENST00000538995 GLRX5Q86SX6 157 aa11.78□□□□□ -0.52
RTN3-209ENST00000538995 ZSCAN30Q86W11 494 aa11.78□□□□□ -0.52
RTN3-209ENST00000538995 UMODL1-AS1Q8N2C9 162 aa11.78□□□□□ -0.52
RTN3-209ENST00000538995 PYROXD2Q8N2H3 581 aa11.78□□□□□ -0.52
RTN3-209ENST00000538995 CHST14Q8NCH0 376 aa11.78□□□□□ -0.52
RTN3-209ENST00000538995 GRIN3AQ8TCU5 1115 aa11.78□□□□□ -0.52
RTN3-209ENST00000538995 ARRDC3Q96B67 414 aa11.78□□□□□ -0.52
RTN3-209ENST00000538995 ZNF653Q96CK0 615 aa11.78□□□□□ -0.52
RTN3-209ENST00000538995 SERAC1Q96JX3 654 aa11.78□□□□□ -0.52
RTN3-209ENST00000538995 TNKS2Q9H2K2 1166 aa11.78□□□□□ -0.52
RTN3-209ENST00000538995 AASDHPPTQ9NRN7 309 aa11.78□□□□□ -0.52
RTN3-209ENST00000538995 ARHGAP20Q9P2F6 1191 aa11.78□□□□□ -0.52
RTN3-209ENST00000538995 CNOT8Q9UFF9 292 aaKnown RBP11.78□□□□□ -0.52
RTN3-209ENST00000538995 PCOLCE2Q9UKZ9 415 aa11.78□□□□□ -0.52
RTN3-209ENST00000538995 CAPN11Q9UMQ6 739 aa11.78□□□□□ -0.52
RTN3-209ENST00000538995 AP4E1Q9UPM8 1137 aa11.78□□□□□ -0.52
RTN3-209ENST00000538995 WASF3Q9UPY6 502 aa11.78□□□□□ -0.52
RTN3-209ENST00000538995 FCF1Q9Y324 198 aaKnown RBP11.78□□□□□ -0.52
RTN3-209ENST00000538995 WASF2Q9Y6W5 498 aa11.78□□□□□ -0.52
RTN3-209ENST00000538995 PLK4O00444 970 aa11.77□□□□□ -0.53
RTN3-209ENST00000538995 ATMINO43313 823 aaPredicted RBP11.77□□□□□ -0.53
RTN3-209ENST00000538995 CREB3O43889 395 aa11.77□□□□□ -0.53
RTN3-209ENST00000538995 MAGEC1O60732 1142 aa11.77□□□□□ -0.53
RTN3-209ENST00000538995 SERPING1P05155 500 aa11.77□□□□□ -0.53
RTN3-209ENST00000538995 PCK1P35558 622 aa11.77□□□□□ -0.53
RTN3-209ENST00000538995 NEK3P51956 506 aa11.77□□□□□ -0.53
RTN3-209ENST00000538995 TPI1P60174 286 aa11.77□□□□□ -0.53
RTN3-209ENST00000538995 SNRPD1P62314 119 aaKnown RBP11.77□□□□□ -0.53
RTN3-209ENST00000538995 ACAP1Q15027 740 aa11.77□□□□□ -0.53
RTN3-209ENST00000538995 TRIP6Q15654 476 aaKnown RBP11.77□□□□□ -0.53
RTN3-209ENST00000538995 INO80DQ53TQ3 878 aaPredicted RBP11.77□□□□□ -0.53
RTN3-209ENST00000538995 ARSIQ5FYB1 569 aa11.77□□□□□ -0.53
RTN3-209ENST00000538995 LAYNQ6UX15 382 aa11.77□□□□□ -0.53
RTN3-209ENST00000538995 HORMAD1Q86X24 394 aa11.77□□□□□ -0.53
RTN3-209ENST00000538995 OXR1Q8N573 874 aa11.77□□□□□ -0.53
RTN3-209ENST00000538995 MFSD2AQ8NA29 543 aa11.77□□□□□ -0.53
RTN3-209ENST00000538995 OR2AP1Q8NGE2 309 aa11.77□□□□□ -0.53
RTN3-209ENST00000538995 BAHD1Q8TBE0 780 aaPredicted RBP11.77□□□□□ -0.53
RTN3-209ENST00000538995 CNTNAP3BQ96NU0 1288 aa11.77□□□□□ -0.53
RTN3-209ENST00000538995 CDC6Q99741 560 aa11.77□□□□□ -0.53
RTN3-209ENST00000538995 OSBPL1AQ9BXW6 950 aa11.77□□□□□ -0.53
RTN3-209ENST00000538995 CNTNAP3Q9BZ76 1288 aa11.77□□□□□ -0.53
RTN3-209ENST00000538995 MAGEB5Q9BZ81 275 aa11.77□□□□□ -0.53
RTN3-209ENST00000538995 NOL6Q9H6R4 1146 aaKnown RBP11.77□□□□□ -0.53
RTN3-209ENST00000538995 ERVMER34-1Q9H9K5 563 aa11.77□□□□□ -0.53
RTN3-209ENST00000538995 GDF3Q9NR23 364 aa11.77□□□□□ -0.53
RTN3-209ENST00000538995 LUC7L2Q9Y383 392 aaKnown RBP11.77□□□□□ -0.53
RTN3-209ENST00000538995 PCDHB9Q9Y5E1 797 aa11.77□□□□□ -0.53
RTN3-209ENST00000538995 KNL1Q8NG31 2342 aa11.77□□□□□ -0.53
RTN3-209ENST00000538995 A0A1B0GTQ1 180 aa11.76□□□□□ -0.53
RTN3-209ENST00000538995 SPAARA0A1B0GVQ0 90 aa11.76□□□□□ -0.53
RTN3-209ENST00000538995 PCNX2A6NKB5 2137 aa11.76□□□□□ -0.53
RTN3-209ENST00000538995 RASA4BC9J798 803 aa11.76□□□□□ -0.53
RTN3-209ENST00000538995 PRAMEF26H0Y7S4 382 aa11.76□□□□□ -0.53
RTN3-209ENST00000538995 H0Y8X5 98 aa11.76□□□□□ -0.53
RTN3-209ENST00000538995 TLR4O00206 839 aa11.76□□□□□ -0.53
RTN3-209ENST00000538995 RASA4O43374 803 aa11.76□□□□□ -0.53
RTN3-209ENST00000538995 BUB1O43683 1085 aa11.76□□□□□ -0.53
RTN3-209ENST00000538995 AP1G1O43747 822 aa11.76□□□□□ -0.53
RTN3-209ENST00000538995 PRPSAP2O60256 369 aa11.76□□□□□ -0.53
RTN3-209ENST00000538995 WNT1P04628 370 aa11.76□□□□□ -0.53
RTN3-209ENST00000538995 GYPCP04921 128 aa11.76□□□□□ -0.53
RTN3-209ENST00000538995 SKILP12757 684 aa11.76□□□□□ -0.53
RTN3-209ENST00000538995 ADRB3P13945 408 aa11.76□□□□□ -0.53
RTN3-209ENST00000538995 GRK6P43250 576 aa11.76□□□□□ -0.53
RTN3-209ENST00000538995 DNA2P51530 1060 aa11.76□□□□□ -0.53
RTN3-209ENST00000538995 NDST2P52849 883 aa11.76□□□□□ -0.53
RTN3-209ENST00000538995 NXPH1P58417 271 aa11.76□□□□□ -0.53
RTN3-209ENST00000538995 FOXC1Q12948 553 aa11.76□□□□□ -0.53
RTN3-209ENST00000538995 SERINC3Q13530 473 aa11.76□□□□□ -0.53
RTN3-209ENST00000538995 KCNT1Q5JUK3 1230 aa11.76□□□□□ -0.53
RTN3-209ENST00000538995 ERMARDQ5T6L9 678 aa11.76□□□□□ -0.53
RTN3-209ENST00000538995 ARFGAP1Q8N6T3 406 aa11.76□□□□□ -0.53
RTN3-209ENST00000538995 TMEM145Q8NBT3 493 aa11.76□□□□□ -0.53
RTN3-209ENST00000538995 RAB7BQ96AH8 199 aa11.76□□□□□ -0.53
RTN3-209ENST00000538995 HMCESQ96FZ2 354 aa11.76□□□□□ -0.53
RTN3-209ENST00000538995 GDAP1L1Q96MZ0 367 aa11.76□□□□□ -0.53
RTN3-209ENST00000538995 CAMK1GQ96NX5 476 aa11.76□□□□□ -0.53
RTN3-209ENST00000538995 ELF4Q99607 663 aaPredicted RBP11.76□□□□□ -0.53
RTN3-209ENST00000538995 SNRNP25Q9BV90 132 aaKnown RBP11.76□□□□□ -0.53
RTN3-209ENST00000538995 TM6SF2Q9BZW4 377 aa11.76□□□□□ -0.53
RTN3-209ENST00000538995 ZDHHC6Q9H6R6 413 aa11.76□□□□□ -0.53
RTN3-209ENST00000538995 IFNKQ9P0W0 207 aa11.76□□□□□ -0.53
RTN3-209ENST00000538995 HECAQ9UBI9 543 aaPredicted RBP11.76□□□□□ -0.53
RTN3-209ENST00000538995 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.76□□□□□ -0.53
RTN3-209ENST00000538995 ADAMTS9Q9P2N4 1935 aa11.76□□□□□ -0.53
RTN3-209ENST00000538995 CHD5Q8TDI0 1954 aa11.76□□□□□ -0.53
RTN3-209ENST00000538995 A0A1W2PQU0 124 aa11.75□□□□□ -0.53
RTN3-209ENST00000538995 EEF2KO00418 725 aaKnown RBP11.75□□□□□ -0.53
RTN3-209ENST00000538995 CBFA2T2O43439 604 aa11.75□□□□□ -0.53
RTN3-209ENST00000538995 LRCH4O75427 683 aa11.75□□□□□ -0.53
RTN3-209ENST00000538995 TMCC1O94876 653 aa11.75□□□□□ -0.53
RTN3-209ENST00000538995 POP4O95707 220 aaKnown RBP11.75□□□□□ -0.53
RTN3-209ENST00000538995 MIPP30301 263 aa11.75□□□□□ -0.53
RTN3-209ENST00000538995 MAT2AP31153 395 aaKnown RBP11.75□□□□□ -0.53
RTN3-209ENST00000538995 HNRNPH3P31942 346 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms