RNA–Protein interactions for RNA: ENST00000538375.5

COPS7A-207, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 898 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-207ENST00000538375 INO80DQ53TQ3 878 aaPredicted RBP13.43□□□□□ -0.26
COPS7A-207ENST00000538375 SPDYCQ5MJ68 293 aa13.43□□□□□ -0.26
COPS7A-207ENST00000538375 ATXN7L2Q5T6C5 722 aaPredicted RBP13.43□□□□□ -0.26
COPS7A-207ENST00000538375 ARHGAP36Q6ZRI8 547 aa13.43□□□□□ -0.26
COPS7A-207ENST00000538375 USP30Q70CQ3 517 aa13.43□□□□□ -0.26
COPS7A-207ENST00000538375 DAAM2Q86T65 1068 aa13.43□□□□□ -0.26
COPS7A-207ENST00000538375 SLC41A1Q8IVJ1 513 aa13.43□□□□□ -0.26
COPS7A-207ENST00000538375 ARHGAP12Q8IWW6 846 aa13.43□□□□□ -0.26
COPS7A-207ENST00000538375 TXLNBQ8N3L3 684 aa13.43□□□□□ -0.26
COPS7A-207ENST00000538375 AADATQ8N5Z0 425 aa13.43□□□□□ -0.26
COPS7A-207ENST00000538375 C12orf50Q8NA57 414 aaPredicted RBP13.43□□□□□ -0.26
COPS7A-207ENST00000538375 OR14C36Q8NHC7 312 aa13.43□□□□□ -0.26
COPS7A-207ENST00000538375 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.43□□□□□ -0.26
COPS7A-207ENST00000538375 CASKIN2Q8WXE0 1202 aa13.43□□□□□ -0.26
COPS7A-207ENST00000538375 TSC1Q92574 1164 aa13.43□□□□□ -0.26
COPS7A-207ENST00000538375 FOXJ1Q92949 421 aa13.43□□□□□ -0.26
COPS7A-207ENST00000538375 ISG20Q96AZ6 181 aaKnown RBP13.43□□□□□ -0.26
COPS7A-207ENST00000538375 ZNF419Q96HQ0 510 aaPredicted RBP13.43□□□□□ -0.26
COPS7A-207ENST00000538375 LACRTQ9GZZ8 138 aa13.43□□□□□ -0.26
COPS7A-207ENST00000538375 MIR1-1HGQ9H1L0 117 aa13.43□□□□□ -0.26
COPS7A-207ENST00000538375 SMOC1Q9H4F8 434 aa13.43□□□□□ -0.26
COPS7A-207ENST00000538375 C6orf106Q9H6K1 298 aaPredicted RBP13.43□□□□□ -0.26
COPS7A-207ENST00000538375 ZDHHC6Q9H6R6 413 aa13.43□□□□□ -0.26
COPS7A-207ENST00000538375 SGK2Q9HBY8 427 aa13.43□□□□□ -0.26
COPS7A-207ENST00000538375 SEMA4GQ9NTN9 838 aa13.43□□□□□ -0.26
COPS7A-207ENST00000538375 DDX56Q9NY93 547 aaKnown RBP13.43□□□□□ -0.26
COPS7A-207ENST00000538375 SERGEFQ9UGK8 458 aa13.43□□□□□ -0.26
COPS7A-207ENST00000538375 IPO11Q9UI26 975 aaKnown RBP13.43□□□□□ -0.26
COPS7A-207ENST00000538375 PCDHGA5Q9Y5G8 931 aa13.43□□□□□ -0.26
COPS7A-207ENST00000538375 EML5Q05BV3 1969 aa13.43□□□□□ -0.26
COPS7A-207ENST00000538375 ATXN2Q99700 1313 aaKnown RBP13.42□□□□□ -0.26
COPS7A-207ENST00000538375 TBC1D3DA0A087WVF3 549 aa13.42□□□□□ -0.26
COPS7A-207ENST00000538375 TBC1D3IA0A087WXS9 549 aa13.42□□□□□ -0.26
COPS7A-207ENST00000538375 TBC1D3EA0A087X179 549 aa13.42□□□□□ -0.26
COPS7A-207ENST00000538375 TBC1D3KA0A087X1G2 549 aa13.42□□□□□ -0.26
COPS7A-207ENST00000538375 CXorf51AA0A1B0GTR3 108 aa13.42□□□□□ -0.26
COPS7A-207ENST00000538375 BCLAF3A2AJT9 711 aaKnown RBP13.42□□□□□ -0.26
COPS7A-207ENST00000538375 TBC1D3FA6NER0 549 aaPredicted RBP13.42□□□□□ -0.26
COPS7A-207ENST00000538375 METTL12A8MUP2 240 aa13.42□□□□□ -0.26
COPS7A-207ENST00000538375 TBC1D3LB9A6J9 549 aa13.42□□□□□ -0.26
COPS7A-207ENST00000538375 PRAMEF11O60813 436 aa13.42□□□□□ -0.26
COPS7A-207ENST00000538375 LEFTY1O75610 366 aa13.42□□□□□ -0.26
COPS7A-207ENST00000538375 POP4O95707 220 aaKnown RBP13.42□□□□□ -0.26
COPS7A-207ENST00000538375 CTSLP07711 333 aa13.42□□□□□ -0.26
COPS7A-207ENST00000538375 TBC1D3HP0C7X1 549 aa13.42□□□□□ -0.26
COPS7A-207ENST00000538375 GKP32189 559 aa13.42□□□□□ -0.26
COPS7A-207ENST00000538375 HADHBP55084 474 aaKnown RBP13.42□□□□□ -0.26
COPS7A-207ENST00000538375 IL10RBQ08334 325 aa13.42□□□□□ -0.26
COPS7A-207ENST00000538375 CCDC15Q0P6D6 951 aa13.42□□□□□ -0.26
COPS7A-207ENST00000538375 CNTN1Q12860 1018 aa13.42□□□□□ -0.26
COPS7A-207ENST00000538375 MYLK3Q32MK0 819 aa13.42□□□□□ -0.26
COPS7A-207ENST00000538375 WDR45BQ5MNZ6 344 aa13.42□□□□□ -0.26
COPS7A-207ENST00000538375 DCAF12L1Q5VU92 463 aa13.42□□□□□ -0.26
COPS7A-207ENST00000538375 AFMIDQ63HM1 303 aa13.42□□□□□ -0.26
COPS7A-207ENST00000538375 TBC1D3GQ6DHY5 549 aa13.42□□□□□ -0.26
COPS7A-207ENST00000538375 TBC1D3CQ6IPX1 549 aa13.42□□□□□ -0.26
COPS7A-207ENST00000538375 TBC1D3Q8IZP1 549 aaPredicted RBP13.42□□□□□ -0.26
COPS7A-207ENST00000538375 GPR161Q8N6U8 529 aaKnown RBP13.42□□□□□ -0.26
COPS7A-207ENST00000538375 TMIEQ8NEW7 156 aa13.42□□□□□ -0.26
COPS7A-207ENST00000538375 CADM4Q8NFZ8 388 aa13.42□□□□□ -0.26
COPS7A-207ENST00000538375 OR2AP1Q8NGE2 309 aa13.42□□□□□ -0.26
COPS7A-207ENST00000538375 TPCN2Q8NHX9 752 aa13.42□□□□□ -0.26
COPS7A-207ENST00000538375 PCDH19Q8TAB3 1148 aa13.42□□□□□ -0.26
COPS7A-207ENST00000538375 FAM71BQ8TC56 605 aa13.42□□□□□ -0.26
COPS7A-207ENST00000538375 NSMCE1Q8WV22 266 aa13.42□□□□□ -0.26
COPS7A-207ENST00000538375 ANP32BQ92688 251 aaKnown RBP13.42□□□□□ -0.26
COPS7A-207ENST00000538375 EXOC2Q96KP1 924 aa13.42□□□□□ -0.26
COPS7A-207ENST00000538375 GDAP1L1Q96MZ0 367 aa13.42□□□□□ -0.26
COPS7A-207ENST00000538375 ZNF670Q9BS34 389 aa13.42□□□□□ -0.26
COPS7A-207ENST00000538375 EVLQ9UI08 416 aaPredicted RBP13.42□□□□□ -0.26
COPS7A-207ENST00000538375 SALL4Q9UJQ4 1053 aa13.42□□□□□ -0.26
COPS7A-207ENST00000538375 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.42□□□□□ -0.26
COPS7A-207ENST00000538375 CEP250Q9BV73 2442 aa13.42□□□□□ -0.26
COPS7A-207ENST00000538375 CKAP5Q14008 2032 aa13.41□□□□□ -0.26
COPS7A-207ENST00000538375 MACROD2A1Z1Q3 448 aa13.41□□□□□ -0.26
COPS7A-207ENST00000538375 LRRC72A6NJI9 287 aa13.41□□□□□ -0.26
COPS7A-207ENST00000538375 KHNYNO15037 678 aaKnown RBP13.41□□□□□ -0.26
COPS7A-207ENST00000538375 NRDCO43847 1150 aa13.41□□□□□ -0.26
COPS7A-207ENST00000538375 MAP3K6O95382 1288 aa13.41□□□□□ -0.26
COPS7A-207ENST00000538375 IGSF6O95976 241 aa13.41□□□□□ -0.26
COPS7A-207ENST00000538375 GSRP00390 522 aa13.41□□□□□ -0.26
COPS7A-207ENST00000538375 CFIP05156 583 aa13.41□□□□□ -0.26
COPS7A-207ENST00000538375 LLGL1Q15334 1064 aa13.41□□□□□ -0.26
COPS7A-207ENST00000538375 SF3A2Q15428 464 aaKnown RBP13.41□□□□□ -0.26
COPS7A-207ENST00000538375 CSRP2Q16527 193 aa13.41□□□□□ -0.26
COPS7A-207ENST00000538375 IFI16Q16666 785 aaKnown RBP13.41□□□□□ -0.26
COPS7A-207ENST00000538375 LRRC38Q5VT99 294 aa13.41□□□□□ -0.26
COPS7A-207ENST00000538375 RFX6Q8HWS3 928 aa13.41□□□□□ -0.26
COPS7A-207ENST00000538375 SYT12Q8IV01 421 aa13.41□□□□□ -0.26
COPS7A-207ENST00000538375 ATPAF2Q8N5M1 289 aa13.41□□□□□ -0.26
COPS7A-207ENST00000538375 PAF1Q8N7H5 531 aa13.41□□□□□ -0.26
COPS7A-207ENST00000538375 KIAA1524Q8TCG1 905 aa13.41□□□□□ -0.26
COPS7A-207ENST00000538375 PPP1R16AQ96I34 528 aa13.41□□□□□ -0.26
COPS7A-207ENST00000538375 CALR3Q96L12 384 aaKnown RBP13.41□□□□□ -0.26
COPS7A-207ENST00000538375 RNF157Q96PX1 679 aa13.41□□□□□ -0.26
COPS7A-207ENST00000538375 CINPQ9BW66 212 aaPredicted RBP13.41□□□□□ -0.26
COPS7A-207ENST00000538375 PARD6AQ9NPB6 346 aa13.41□□□□□ -0.26
COPS7A-207ENST00000538375 VPS45Q9NRW7 570 aa13.41□□□□□ -0.26
COPS7A-207ENST00000538375 TMEM74BQ9NUR3 256 aa13.41□□□□□ -0.26
COPS7A-207ENST00000538375 DLL3Q9NYJ7 618 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms