RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 E9PAM4 449 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 NRP1O14786 923 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 CATP04040 527 aaKnown RBP5.42□□□□□ -1.54
LRP6-203ENST00000538239 SLC35G4P0C7Q5 338 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 ERCC2P18074 760 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 MAT2AP31153 395 aaKnown RBP5.42□□□□□ -1.54
LRP6-203ENST00000538239 MC4RP32245 332 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 STX5Q13190 355 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 PWP2Q15269 919 aaKnown RBP5.42□□□□□ -1.54
LRP6-203ENST00000538239 CCDC153Q494R4 210 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 AGKQ53H12 422 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 PAGE2BQ5JRK9 111 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 IYDQ6PHW0 289 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 PARP9Q8IXQ6 854 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 LRRC34Q8IZ02 419 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 JOSD2Q8TAC2 188 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 BTN2A3PQ96KV6 586 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 C12orf42Q96LP6 360 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 MAGEB18Q96M61 343 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 RHOBTB2Q9BYZ6 727 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 IL22Q9GZX6 179 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 TMCC3Q9ULS5 477 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 PCDHGA4Q9Y5G9 962 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 UGT2B4P06133 528 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 GLI1P08151 1106 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 CYP3A5P20815 502 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 TACR2P21452 398 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 FSHRP23945 695 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 PPP2R1BP30154 601 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 SEC24CP53992 1094 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 ARHGAP1Q07960 439 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 SLC25A52Q3SY17 297 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 STXBP5Q5T5C0 1151 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 ALKBH2Q6NS38 261 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 ZCCHC8Q6NZY4 707 aaKnown RBP5.42□□□□□ -1.54
LRP6-203ENST00000538239 LRRC55Q6ZSA7 311 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 SLC9A9Q8IVB4 645 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 RAVER1Q8IY67 606 aaKnown RBP5.42□□□□□ -1.54
LRP6-203ENST00000538239 DSELQ8IZU8 1212 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 KCTD14Q9BQ13 255 aaPredicted RBP5.42□□□□□ -1.54
LRP6-203ENST00000538239 TMEM120AQ9BXJ8 343 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 ARMC7Q9H6L4 198 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 MRGBPQ9NV56 204 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 POLG2Q9UHN1 485 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 MRPS17Q9Y2R5 130 aaKnown RBP5.42□□□□□ -1.54
LRP6-203ENST00000538239 INSL6Q9Y581 213 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 SNX10Q9Y5X0 201 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 DOT1LQ8TEK3 1739 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 IGKV6D-41A0A0C4DH26 115 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 A0A1W2PRU2 124 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 RIPK2O43353 540 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 C4BPAP04003 597 aaKnown RBP5.42□□□□□ -1.54
LRP6-203ENST00000538239 LSP1P33241 339 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 HPCAL1P37235 193 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 NRIP1P48552 1158 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 PRKAG1P54619 331 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 CAP1Q01518 475 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 PKN2Q16513 984 aaKnown RBP5.42□□□□□ -1.54
LRP6-203ENST00000538239 PFKFB4Q16877 469 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 BRMS1LQ5PSV4 323 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 LYPLAL1Q5VWZ2 237 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 TRPM8Q7Z2W7 1104 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 FAM228AQ86W67 206 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 PHF13Q86YI8 300 aaPredicted RBP5.42□□□□□ -1.54
LRP6-203ENST00000538239 SYT12Q8IV01 421 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 FAM9CQ8IZT9 166 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 FAM120BQ96EK7 910 aaKnown RBP5.42□□□□□ -1.54
LRP6-203ENST00000538239 PRDM12Q9H4Q4 367 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 KRT84Q9NSB2 600 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 RABGEF1Q9UJ41 708 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 CHKBQ9Y259 395 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 RGPD2P0DJD1 1756 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 H3BMM5 538 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 C22orf31O95567 290 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 ANXA5P08758 320 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 PRLRP16471 622 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 LMO2P25791 158 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 TIE1P35590 1138 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 SKIV2L2P42285 1042 aaKnown RBP5.42□□□□□ -1.54
LRP6-203ENST00000538239 FAAP100Q0VG06 881 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 TMED1Q13445 227 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 GRB14Q14449 540 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 LRRC23Q53EV4 343 aaPredicted RBP5.42□□□□□ -1.54
LRP6-203ENST00000538239 NEPROQ6NW34 567 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 NRSN1Q8IZ57 195 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 C1orf127Q8N9H9 656 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 KLK6Q92876 244 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 ABTB1Q969K4 478 aaPredicted RBP5.42□□□□□ -1.54
LRP6-203ENST00000538239 GFM2Q969S9 779 aaKnown RBP5.42□□□□□ -1.54
LRP6-203ENST00000538239 SLC4A5Q9BY07 1137 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 SEMA4AQ9H3S1 761 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 RERGLQ9H628 205 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 NINJ2Q9NZG7 142 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 KLQ9UEF7 1012 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 ZSCAN5CA6NGD5 496 aaPredicted RBP5.42□□□□□ -1.54
LRP6-203ENST00000538239 H0Y858 1186 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 AP5Z1O43299 807 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 RGS14O43566 566 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 OR10H2O60403 315 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 PSMA4P25789 261 aaKnown RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms