RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 PPP1R16AQ96I34 528 aa11.39□□□□□ -0.59
CLPB-208ENST00000538021 ZNF396Q96N95 335 aaPredicted RBP11.39□□□□□ -0.59
CLPB-208ENST00000538021 TMEM74Q96NL1 305 aa11.39□□□□□ -0.59
CLPB-208ENST00000538021 RPRD1AQ96P16 312 aaPredicted RBP11.39□□□□□ -0.59
CLPB-208ENST00000538021 HDAC8Q9BY41 377 aa11.39□□□□□ -0.59
CLPB-208ENST00000538021 SLC13A1Q9BZW2 595 aa11.39□□□□□ -0.59
CLPB-208ENST00000538021 MUC3BQ9H195 1237 aa11.39□□□□□ -0.59
CLPB-208ENST00000538021 ST7Q9NRC1 585 aa11.39□□□□□ -0.59
CLPB-208ENST00000538021 IGSF5Q9NSI5 407 aa11.39□□□□□ -0.59
CLPB-208ENST00000538021 PPP4R2Q9NY27 417 aa11.39□□□□□ -0.59
CLPB-208ENST00000538021 KCNK4Q9NYG8 393 aa11.39□□□□□ -0.59
CLPB-208ENST00000538021 SIRPGQ9P1W8 387 aa11.39□□□□□ -0.59
CLPB-208ENST00000538021 IL36AQ9UHA7 158 aa11.39□□□□□ -0.59
CLPB-208ENST00000538021 RABGEF1Q9UJ41 708 aa11.39□□□□□ -0.59
CLPB-208ENST00000538021 TEP1Q99973 2627 aaKnown RBP11.38□□□□□ -0.59
CLPB-208ENST00000538021 SYNJ2BP-COX16A0A087WUM0 186 aa11.38□□□□□ -0.59
CLPB-208ENST00000538021 A0A1W2PQM1 296 aa11.38□□□□□ -0.59
CLPB-208ENST00000538021 LMO7DNF2Z398 122 aa11.38□□□□□ -0.59
CLPB-208ENST00000538021 K7ERQ8 282 aa11.38□□□□□ -0.59
CLPB-208ENST00000538021 STX10O60499 249 aa11.38□□□□□ -0.59
CLPB-208ENST00000538021 SNAP91O60641 907 aa11.38□□□□□ -0.59
CLPB-208ENST00000538021 LEFTY1O75610 366 aa11.38□□□□□ -0.59
CLPB-208ENST00000538021 ENDOD1O94919 500 aa11.38□□□□□ -0.59
CLPB-208ENST00000538021 YEATS4O95619 227 aa11.38□□□□□ -0.59
CLPB-208ENST00000538021 TRUB2O95900 331 aaKnown RBP11.38□□□□□ -0.59
CLPB-208ENST00000538021 CALCAP01258 141 aa11.38□□□□□ -0.59
CLPB-208ENST00000538021 TSHRP16473 764 aa11.38□□□□□ -0.59
CLPB-208ENST00000538021 RRM1P23921 792 aa11.38□□□□□ -0.59
CLPB-208ENST00000538021 BRD2P25440 801 aaKnown RBP11.38□□□□□ -0.59
CLPB-208ENST00000538021 RECQLP46063 649 aaPredicted RBP11.38□□□□□ -0.59
CLPB-208ENST00000538021 NEK3P51956 506 aa11.38□□□□□ -0.59
CLPB-208ENST00000538021 THOP1P52888 689 aa11.38□□□□□ -0.59
CLPB-208ENST00000538021 POLE2P56282 527 aa11.38□□□□□ -0.59
CLPB-208ENST00000538021 KRT83P78385 493 aa11.38□□□□□ -0.59
CLPB-208ENST00000538021 PTK2BQ14289 1009 aa11.38□□□□□ -0.59
CLPB-208ENST00000538021 CNGA2Q16280 664 aa11.38□□□□□ -0.59
CLPB-208ENST00000538021 NFIL3Q16649 462 aa11.38□□□□□ -0.59
CLPB-208ENST00000538021 FAXCQ5TGI0 409 aa11.38□□□□□ -0.59
CLPB-208ENST00000538021 TCERG1LQ5VWI1 586 aa11.38□□□□□ -0.59
CLPB-208ENST00000538021 FBXL22Q6P050 247 aa11.38□□□□□ -0.59
CLPB-208ENST00000538021 PHACTR4Q8IZ21 702 aa11.38□□□□□ -0.59
CLPB-208ENST00000538021 ARL10Q8N8L6 244 aa11.38□□□□□ -0.59
CLPB-208ENST00000538021 USP7Q93009 1102 aa11.38□□□□□ -0.59
CLPB-208ENST00000538021 PRMT1Q99873 361 aaKnown RBP11.38□□□□□ -0.59
CLPB-208ENST00000538021 LRRC61Q9BV99 259 aa11.38□□□□□ -0.59
CLPB-208ENST00000538021 SRRTQ9BXP5 876 aaKnown RBP11.38□□□□□ -0.59
CLPB-208ENST00000538021 TNKS2Q9H2K2 1166 aa11.38□□□□□ -0.59
CLPB-208ENST00000538021 FOXD4L1Q9NU39 408 aa11.38□□□□□ -0.59
CLPB-208ENST00000538021 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.38□□□□□ -0.59
CLPB-208ENST00000538021 FOXJ2Q9P0K8 574 aa11.38□□□□□ -0.59
CLPB-208ENST00000538021 COX16Q9P0S2 106 aa11.38□□□□□ -0.59
CLPB-208ENST00000538021 VANGL2Q9ULK5 521 aa11.38□□□□□ -0.59
CLPB-208ENST00000538021 CREBBPQ92793 2442 aa11.37□□□□□ -0.59
CLPB-208ENST00000538021 IGLON5A6NGN9 336 aa11.37□□□□□ -0.59
CLPB-208ENST00000538021 SART1O43290 800 aaKnown RBP11.37□□□□□ -0.59
CLPB-208ENST00000538021 SMAD6O43541 496 aaKnown RBP11.37□□□□□ -0.59
CLPB-208ENST00000538021 CELA2BP08218 269 aaPredicted RBP11.37□□□□□ -0.59
CLPB-208ENST00000538021 PAEPP09466 180 aa11.37□□□□□ -0.59
CLPB-208ENST00000538021 EPB41P11171 864 aaKnown RBP11.37□□□□□ -0.59
CLPB-208ENST00000538021 ADRB3P13945 408 aa11.37□□□□□ -0.59
CLPB-208ENST00000538021 CCKBRP32239 447 aa11.37□□□□□ -0.59
CLPB-208ENST00000538021 ETV5P41161 510 aa11.37□□□□□ -0.59
CLPB-208ENST00000538021 ME1P48163 572 aa11.37□□□□□ -0.59
CLPB-208ENST00000538021 IRAK1P51617 712 aa11.37□□□□□ -0.59
CLPB-208ENST00000538021 C1QBPQ07021 282 aaKnown RBP11.37□□□□□ -0.59
CLPB-208ENST00000538021 FOXD4L6Q3SYB3 417 aaPredicted RBP11.37□□□□□ -0.59
CLPB-208ENST00000538021 CBWD6Q4V339 395 aa11.37□□□□□ -0.59
CLPB-208ENST00000538021 DCAF17Q5H9S7 520 aaPredicted RBP11.37□□□□□ -0.59
CLPB-208ENST00000538021 CBWD3Q5JTY5 395 aa11.37□□□□□ -0.59
CLPB-208ENST00000538021 CBWD5Q5RIA9 395 aa11.37□□□□□ -0.59
CLPB-208ENST00000538021 LINGO4Q6UY18 593 aa11.37□□□□□ -0.59
CLPB-208ENST00000538021 FOXD4L3Q6VB84 417 aaPredicted RBP11.37□□□□□ -0.59
CLPB-208ENST00000538021 DTX1Q86Y01 620 aa11.37□□□□□ -0.59
CLPB-208ENST00000538021 KYQ8NBH2 561 aa11.37□□□□□ -0.59
CLPB-208ENST00000538021 SCG3Q8WXD2 468 aaKnown RBP11.37□□□□□ -0.59
CLPB-208ENST00000538021 KLF6Q99612 283 aaPredicted RBP11.37□□□□□ -0.59
CLPB-208ENST00000538021 ZSWIM1Q9BR11 485 aa11.37□□□□□ -0.59
CLPB-208ENST00000538021 TRIM62Q9BVG3 475 aa11.37□□□□□ -0.59
CLPB-208ENST00000538021 CLPBQ9H078 707 aa11.37□□□□□ -0.59
CLPB-208ENST00000538021 LRRN3Q9H3W5 708 aa11.37□□□□□ -0.59
CLPB-208ENST00000538021 FAM204AQ9H8W3 233 aa11.37□□□□□ -0.59
CLPB-208ENST00000538021 ZNF71Q9NQZ8 489 aaPredicted RBP11.37□□□□□ -0.59
CLPB-208ENST00000538021 ANAPC2Q9UJX6 822 aa11.37□□□□□ -0.59
CLPB-208ENST00000538021 PNMA8BQ9ULN7 279 aaPredicted RBP11.37□□□□□ -0.59
CLPB-208ENST00000538021 PLAAQ9Y263 795 aa11.37□□□□□ -0.59
CLPB-208ENST00000538021 HS3ST2Q9Y278 367 aa11.37□□□□□ -0.59
CLPB-208ENST00000538021 PCDHB4Q9Y5E5 795 aa11.37□□□□□ -0.59
CLPB-208ENST00000538021 OR51B4Q9Y5P0 310 aa11.37□□□□□ -0.59
CLPB-208ENST00000538021 FADS3Q9Y5Q0 445 aa11.37□□□□□ -0.59
CLPB-208ENST00000538021 A0A1W2PQ27 194 aa11.36□□□□□ -0.59
CLPB-208ENST00000538021 A0A1W2PQ64 194 aa11.36□□□□□ -0.59
CLPB-208ENST00000538021 A0A1W2PQC6 194 aa11.36□□□□□ -0.59
CLPB-208ENST00000538021 C9orf172C9J069 976 aa11.36□□□□□ -0.59
CLPB-208ENST00000538021 M0QYT0 321 aa11.36□□□□□ -0.59
CLPB-208ENST00000538021 NEMP1O14524 444 aa11.36□□□□□ -0.59
CLPB-208ENST00000538021 ACTN4O43707 911 aaKnown RBP11.36□□□□□ -0.59
CLPB-208ENST00000538021 RHOCP08134 193 aa11.36□□□□□ -0.59
CLPB-208ENST00000538021 PRR29P0C7W0 189 aa11.36□□□□□ -0.59
CLPB-208ENST00000538021 TBXAS1P24557 533 aaPredicted RBP11.36□□□□□ -0.59
CLPB-208ENST00000538021 GGCXP38435 758 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms