RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 GFPT2O94808 682 aa8.62□□□□□ -1.03
USP28-203ENST00000537490 MT-CO3P00414 261 aa8.62□□□□□ -1.03
USP28-203ENST00000537490 MYF5P13349 255 aa8.62□□□□□ -1.03
USP28-203ENST00000537490 ADRB3P13945 408 aa8.62□□□□□ -1.03
USP28-203ENST00000537490 L1CAMP32004 1257 aa8.62□□□□□ -1.03
USP28-203ENST00000537490 GKP32189 559 aa8.62□□□□□ -1.03
USP28-203ENST00000537490 ADRA1BP35368 520 aa8.62□□□□□ -1.03
USP28-203ENST00000537490 CCNHP51946 323 aaPredicted RBP8.62□□□□□ -1.03
USP28-203ENST00000537490 NEK3P51956 506 aa8.62□□□□□ -1.03
USP28-203ENST00000537490 DAB2P98082 770 aa8.62□□□□□ -1.03
USP28-203ENST00000537490 FMO1Q01740 532 aa8.62□□□□□ -1.03
USP28-203ENST00000537490 RTP5Q14D33 572 aa8.62□□□□□ -1.03
USP28-203ENST00000537490 ACAP1Q15027 740 aa8.62□□□□□ -1.03
USP28-203ENST00000537490 CDO1Q16878 200 aa8.62□□□□□ -1.03
USP28-203ENST00000537490 C15orf59Q2T9L4 293 aaPredicted RBP8.62□□□□□ -1.03
USP28-203ENST00000537490 CCDC14Q49A88 953 aa8.62□□□□□ -1.03
USP28-203ENST00000537490 TMEM259Q4ZIN3 620 aa8.62□□□□□ -1.03
USP28-203ENST00000537490 FAM72AQ5TYM5 149 aa8.62□□□□□ -1.03
USP28-203ENST00000537490 MANEALQ5VSG8 457 aa8.62□□□□□ -1.03
USP28-203ENST00000537490 FAM72DQ6L9T8 149 aa8.62□□□□□ -1.03
USP28-203ENST00000537490 Q6ZSR6 202 aa8.62□□□□□ -1.03
USP28-203ENST00000537490 TMC6Q7Z403 805 aa8.62□□□□□ -1.03
USP28-203ENST00000537490 FAM72BQ86X60 149 aa8.62□□□□□ -1.03
USP28-203ENST00000537490 CACTIN-AS1Q8N1I8 211 aa8.62□□□□□ -1.03
USP28-203ENST00000537490 PCDH20Q8N6Y1 951 aaKnown RBP8.62□□□□□ -1.03
USP28-203ENST00000537490 MSANTD4Q8NCY6 345 aa8.62□□□□□ -1.03
USP28-203ENST00000537490 OR4C6Q8NH72 309 aa8.62□□□□□ -1.03
USP28-203ENST00000537490 JOSD2Q8TAC2 188 aa8.62□□□□□ -1.03
USP28-203ENST00000537490 SLC30A5Q8TAD4 765 aa8.62□□□□□ -1.03
USP28-203ENST00000537490 RFFLQ8WZ73 363 aa8.62□□□□□ -1.03
USP28-203ENST00000537490 VOPP1Q96AW1 172 aa8.62□□□□□ -1.03
USP28-203ENST00000537490 NXPE2Q96DL1 559 aa8.62□□□□□ -1.03
USP28-203ENST00000537490 PPP1R16AQ96I34 528 aa8.62□□□□□ -1.03
USP28-203ENST00000537490 FEM1CQ96JP0 617 aa8.62□□□□□ -1.03
USP28-203ENST00000537490 PCDHB18PQ96TA0 734 aa8.62□□□□□ -1.03
USP28-203ENST00000537490 SLC17A9Q9BYT1 436 aa8.62□□□□□ -1.03
USP28-203ENST00000537490 TM6SF2Q9BZW4 377 aa8.62□□□□□ -1.03
USP28-203ENST00000537490 CEP44Q9C0F1 390 aa8.62□□□□□ -1.03
USP28-203ENST00000537490 NRSN2Q9GZP1 204 aa8.62□□□□□ -1.03
USP28-203ENST00000537490 NUP62CLQ9H1M0 184 aa8.62□□□□□ -1.03
USP28-203ENST00000537490 VPS16Q9H269 839 aa8.62□□□□□ -1.03
USP28-203ENST00000537490 HECAQ9UBI9 543 aaPredicted RBP8.62□□□□□ -1.03
USP28-203ENST00000537490 DACH1Q9UI36 760 aa8.62□□□□□ -1.03
USP28-203ENST00000537490 NOCTQ9UK39 431 aaKnown RBP8.62□□□□□ -1.03
USP28-203ENST00000537490 CLCA2Q9UQC9 943 aa8.62□□□□□ -1.03
USP28-203ENST00000537490 HS3ST3A1Q9Y663 406 aa8.62□□□□□ -1.03
USP28-203ENST00000537490 SPEGQ15772 3267 aa8.61□□□□□ -1.03
USP28-203ENST00000537490 IGLON5A6NGN9 336 aa8.61□□□□□ -1.03
USP28-203ENST00000537490 EPHB6O15197 1021 aa8.61□□□□□ -1.03
USP28-203ENST00000537490 MMP8P22894 467 aa8.61□□□□□ -1.03
USP28-203ENST00000537490 ITGB7P26010 798 aa8.61□□□□□ -1.03
USP28-203ENST00000537490 EEF1GP26641 437 aaKnown RBP8.61□□□□□ -1.03
USP28-203ENST00000537490 EIF2S3P41091 472 aaKnown RBP8.61□□□□□ -1.03
USP28-203ENST00000537490 ABL2P42684 1182 aa8.61□□□□□ -1.03
USP28-203ENST00000537490 ABCG1P45844 678 aa8.61□□□□□ -1.03
USP28-203ENST00000537490 POLR2FP61218 127 aaKnown RBP8.61□□□□□ -1.03
USP28-203ENST00000537490 RPS21P63220 83 aaKnown RBP8.61□□□□□ -1.03
USP28-203ENST00000537490 E2F1Q01094 437 aa8.61□□□□□ -1.03
USP28-203ENST00000537490 CDR2Q01850 454 aa8.61□□□□□ -1.03
USP28-203ENST00000537490 NRG1Q02297 640 aaPredicted RBP8.61□□□□□ -1.03
USP28-203ENST00000537490 PTP4A2Q12974 167 aa8.61□□□□□ -1.03
USP28-203ENST00000537490 FZD2Q14332 565 aa8.61□□□□□ -1.03
USP28-203ENST00000537490 TPRG1LQ5T0D9 272 aa8.61□□□□□ -1.03
USP28-203ENST00000537490 RWDD4Q6NW29 188 aaKnown RBP8.61□□□□□ -1.03
USP28-203ENST00000537490 KDM7AQ6ZMT4 941 aa8.61□□□□□ -1.03
USP28-203ENST00000537490 LEKR1Q6ZMV7 388 aa8.61□□□□□ -1.03
USP28-203ENST00000537490 PARS2Q7L3T8 475 aaKnown RBP8.61□□□□□ -1.03
USP28-203ENST00000537490 NLRP14Q86W24 1093 aa8.61□□□□□ -1.03
USP28-203ENST00000537490 ZNF677Q86XU0 584 aa8.61□□□□□ -1.03
USP28-203ENST00000537490 DCBLD1Q8N8Z6 715 aa8.61□□□□□ -1.03
USP28-203ENST00000537490 OR6K2Q8NGY2 324 aa8.61□□□□□ -1.03
USP28-203ENST00000537490 ENOX1Q8TC92 643 aaKnown RBP8.61□□□□□ -1.03
USP28-203ENST00000537490 GPT2Q8TD30 523 aa8.61□□□□□ -1.03
USP28-203ENST00000537490 ARHGEF2Q92974 986 aaKnown RBP8.61□□□□□ -1.03
USP28-203ENST00000537490 IFT43Q96FT9 208 aa8.61□□□□□ -1.03
USP28-203ENST00000537490 APOLD1Q96LR9 279 aa8.61□□□□□ -1.03
USP28-203ENST00000537490 KLF6Q99612 283 aaPredicted RBP8.61□□□□□ -1.03
USP28-203ENST00000537490 C11orf70Q9BRQ4 267 aa8.61□□□□□ -1.03
USP28-203ENST00000537490 OSBPL2Q9H1P3 480 aa8.61□□□□□ -1.03
USP28-203ENST00000537490 ZDHHC6Q9H6R6 413 aa8.61□□□□□ -1.03
USP28-203ENST00000537490 NLRC4Q9NPP4 1024 aa8.61□□□□□ -1.03
USP28-203ENST00000537490 GPR27Q9NS67 375 aa8.61□□□□□ -1.03
USP28-203ENST00000537490 OR12D3Q9UGF7 316 aa8.61□□□□□ -1.03
USP28-203ENST00000537490 DNAI1Q9UI46 699 aa8.61□□□□□ -1.03
USP28-203ENST00000537490 GGT7Q9UJ14 662 aa8.61□□□□□ -1.03
USP28-203ENST00000537490 RAI2Q9Y5P3 530 aa8.61□□□□□ -1.03
USP28-203ENST00000537490 NYNRINQ9P2P1 1898 aaKnown RBP8.61□□□□□ -1.03
USP28-203ENST00000537490 FASNP49327 2511 aaKnown RBP8.6□□□□□ -1.03
USP28-203ENST00000537490 DMXL2Q8TDJ6 3036 aa8.6□□□□□ -1.03
USP28-203ENST00000537490 LY6G6EA0A0G2JKS1 128 aa8.6□□□□□ -1.03
USP28-203ENST00000537490 C2CD4BA6NLJ0 364 aa8.6□□□□□ -1.03
USP28-203ENST00000537490 C16orf96A6NNT2 1141 aa8.6□□□□□ -1.03
USP28-203ENST00000537490 A6NNZ2 444 aa8.6□□□□□ -1.03
USP28-203ENST00000537490 K7ESM1 405 aa8.6□□□□□ -1.03
USP28-203ENST00000537490 SCAMP1O15126 338 aa8.6□□□□□ -1.03
USP28-203ENST00000537490 SPINT1O43278 529 aa8.6□□□□□ -1.03
USP28-203ENST00000537490 AP1G1O43747 822 aa8.6□□□□□ -1.03
USP28-203ENST00000537490 OPA1O60313 960 aa8.6□□□□□ -1.03
USP28-203ENST00000537490 BRINP1O60477 761 aa8.6□□□□□ -1.03
USP28-203ENST00000537490 NEBLO76041 1014 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms