RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 TMCC1O94876 653 aa13.4□□□□□ -0.26
PRKDC-206ENST00000536429 TPM1P09493 284 aa13.4□□□□□ -0.26
PRKDC-206ENST00000536429 GNSP15586 552 aa13.4□□□□□ -0.26
PRKDC-206ENST00000536429 CD27P26842 260 aa13.4□□□□□ -0.26
PRKDC-206ENST00000536429 HTR7P34969 479 aa13.4□□□□□ -0.26
PRKDC-206ENST00000536429 CSNK1EP49674 416 aaKnown RBP13.4□□□□□ -0.26
PRKDC-206ENST00000536429 ACAP1Q15027 740 aa13.4□□□□□ -0.26
PRKDC-206ENST00000536429 DPYSL2Q16555 572 aa13.4□□□□□ -0.26
PRKDC-206ENST00000536429 PARP15Q460N3 678 aa13.4□□□□□ -0.26
PRKDC-206ENST00000536429 AFMIDQ63HM1 303 aa13.4□□□□□ -0.26
PRKDC-206ENST00000536429 ARHGAP36Q6ZRI8 547 aa13.4□□□□□ -0.26
PRKDC-206ENST00000536429 PSTKQ8IV42 348 aaKnown RBP13.4□□□□□ -0.26
PRKDC-206ENST00000536429 MINDY1Q8N5J2 469 aa13.4□□□□□ -0.26
PRKDC-206ENST00000536429 TMIEQ8NEW7 156 aa13.4□□□□□ -0.26
PRKDC-206ENST00000536429 SLC6A18Q96N87 628 aa13.4□□□□□ -0.26
PRKDC-206ENST00000536429 PDFQ9HBH1 243 aa13.4□□□□□ -0.26
PRKDC-206ENST00000536429 HECAQ9UBI9 543 aaPredicted RBP13.4□□□□□ -0.26
PRKDC-206ENST00000536429 SUSD2Q9UGT4 822 aa13.4□□□□□ -0.26
PRKDC-206ENST00000536429 HPCAL4Q9UM19 191 aa13.4□□□□□ -0.26
PRKDC-206ENST00000536429 CACNA1EQ15878 2313 aa13.4□□□□□ -0.26
PRKDC-206ENST00000536429 SPEGQ15772 3267 aa13.4□□□□□ -0.26
PRKDC-206ENST00000536429 PCDH15Q96QU1 1955 aa13.4□□□□□ -0.27
PRKDC-206ENST00000536429 TBC1D3DA0A087WVF3 549 aa13.39□□□□□ -0.27
PRKDC-206ENST00000536429 TBC1D3IA0A087WXS9 549 aa13.39□□□□□ -0.27
PRKDC-206ENST00000536429 TBC1D3EA0A087X179 549 aa13.39□□□□□ -0.27
PRKDC-206ENST00000536429 TBC1D3KA0A087X1G2 549 aa13.39□□□□□ -0.27
PRKDC-206ENST00000536429 A0A1B0GVT2 93 aa13.39□□□□□ -0.27
PRKDC-206ENST00000536429 A0A1W2PPC4 97 aa13.39□□□□□ -0.27
PRKDC-206ENST00000536429 TBC1D3FA6NER0 549 aaPredicted RBP13.39□□□□□ -0.27
PRKDC-206ENST00000536429 EIF3CLB5ME19 914 aaKnown RBP13.39□□□□□ -0.27
PRKDC-206ENST00000536429 TBC1D3LB9A6J9 549 aa13.39□□□□□ -0.27
PRKDC-206ENST00000536429 MYO1FO00160 1098 aa13.39□□□□□ -0.27
PRKDC-206ENST00000536429 DAPK3O43293 454 aa13.39□□□□□ -0.27
PRKDC-206ENST00000536429 PRNPP04156 253 aa13.39□□□□□ -0.27
PRKDC-206ENST00000536429 CD48P09326 243 aa13.39□□□□□ -0.27
PRKDC-206ENST00000536429 H2AFZP0C0S5 128 aa13.39□□□□□ -0.27
PRKDC-206ENST00000536429 TBC1D3HP0C7X1 549 aa13.39□□□□□ -0.27
PRKDC-206ENST00000536429 AMPD1P23109 780 aa13.39□□□□□ -0.27
PRKDC-206ENST00000536429 MAT2AP31153 395 aaKnown RBP13.39□□□□□ -0.27
PRKDC-206ENST00000536429 RECQLP46063 649 aaPredicted RBP13.39□□□□□ -0.27
PRKDC-206ENST00000536429 PAPOLAP51003 745 aaKnown RBP13.39□□□□□ -0.27
PRKDC-206ENST00000536429 YBEYP58557 167 aaPredicted RBP13.39□□□□□ -0.27
PRKDC-206ENST00000536429 TAS2R40P59535 323 aa13.39□□□□□ -0.27
PRKDC-206ENST00000536429 SFSWAPQ12872 951 aaKnown RBP13.39□□□□□ -0.27
PRKDC-206ENST00000536429 CYTH1Q15438 398 aa13.39□□□□□ -0.27
PRKDC-206ENST00000536429 TSR1Q2NL82 804 aaKnown RBP13.39□□□□□ -0.27
PRKDC-206ENST00000536429 ATP13A4Q4VNC1 1196 aa13.39□□□□□ -0.27
PRKDC-206ENST00000536429 BOLA3Q53S33 107 aa13.39□□□□□ -0.27
PRKDC-206ENST00000536429 TBC1D3GQ6DHY5 549 aa13.39□□□□□ -0.27
PRKDC-206ENST00000536429 TBC1D3CQ6IPX1 549 aa13.39□□□□□ -0.27
PRKDC-206ENST00000536429 H2AFVQ71UI9 128 aa13.39□□□□□ -0.27
PRKDC-206ENST00000536429 POLNQ7Z5Q5 900 aa13.39□□□□□ -0.27
PRKDC-206ENST00000536429 RABEPKQ7Z6M1 372 aa13.39□□□□□ -0.27
PRKDC-206ENST00000536429 CNGA4Q8IV77 575 aa13.39□□□□□ -0.27
PRKDC-206ENST00000536429 TBC1D3Q8IZP1 549 aaPredicted RBP13.39□□□□□ -0.27
PRKDC-206ENST00000536429 RYBPQ8N488 228 aaPredicted RBP13.39□□□□□ -0.27
PRKDC-206ENST00000536429 CTNNBL1Q8WYA6 563 aaPredicted RBP13.39□□□□□ -0.27
PRKDC-206ENST00000536429 ISG20Q96AZ6 181 aaKnown RBP13.39□□□□□ -0.27
PRKDC-206ENST00000536429 CCDC114Q96M63 670 aa13.39□□□□□ -0.27
PRKDC-206ENST00000536429 CCDC42Q96M95 316 aa13.39□□□□□ -0.27
PRKDC-206ENST00000536429 CSPG4P5Q96PW8 444 aa13.39□□□□□ -0.27
PRKDC-206ENST00000536429 EIF3CQ99613 913 aaKnown RBP13.39□□□□□ -0.27
PRKDC-206ENST00000536429 HEPHQ9BQS7 1158 aa13.39□□□□□ -0.27
PRKDC-206ENST00000536429 ZDHHC6Q9H6R6 413 aa13.39□□□□□ -0.27
PRKDC-206ENST00000536429 IL21RQ9HBE5 538 aa13.39□□□□□ -0.27
PRKDC-206ENST00000536429 PCDH18Q9HCL0 1135 aa13.39□□□□□ -0.27
PRKDC-206ENST00000536429 KLHL11Q9NVR0 708 aa13.39□□□□□ -0.27
PRKDC-206ENST00000536429 LHX3Q9UBR4 397 aa13.39□□□□□ -0.27
PRKDC-206ENST00000536429 FARP1Q9Y4F1 1045 aaPredicted RBP13.39□□□□□ -0.27
PRKDC-206ENST00000536429 CEP192Q8TEP8 1941 aa13.39□□□□□ -0.27
PRKDC-206ENST00000536429 CHD5Q8TDI0 1954 aa13.38□□□□□ -0.27
PRKDC-206ENST00000536429 CXorf51AA0A1B0GTR3 108 aa13.38□□□□□ -0.27
PRKDC-206ENST00000536429 TMEM110-MUSTN1A8MSY1 372 aa13.38□□□□□ -0.27
PRKDC-206ENST00000536429 GIPC1O14908 333 aa13.38□□□□□ -0.27
PRKDC-206ENST00000536429 INSIG1O15503 277 aa13.38□□□□□ -0.27
PRKDC-206ENST00000536429 SLC7A4O43246 635 aa13.38□□□□□ -0.27
PRKDC-206ENST00000536429 PRAMEF11O60813 436 aa13.38□□□□□ -0.27
PRKDC-206ENST00000536429 GJB3O75712 270 aa13.38□□□□□ -0.27
PRKDC-206ENST00000536429 PROSCO94903 275 aa13.38□□□□□ -0.27
PRKDC-206ENST00000536429 GSRP00390 522 aa13.38□□□□□ -0.27
PRKDC-206ENST00000536429 WNT1P04628 370 aa13.38□□□□□ -0.27
PRKDC-206ENST00000536429 TMEM253P0C7T8 217 aa13.38□□□□□ -0.27
PRKDC-206ENST00000536429 KCNA4P22459 653 aa13.38□□□□□ -0.27
PRKDC-206ENST00000536429 IL4RP24394 825 aa13.38□□□□□ -0.27
PRKDC-206ENST00000536429 GJC1P36383 396 aa13.38□□□□□ -0.27
PRKDC-206ENST00000536429 SSR1P43307 286 aaKnown RBP13.38□□□□□ -0.27
PRKDC-206ENST00000536429 HCAR3P49019 387 aa13.38□□□□□ -0.27
PRKDC-206ENST00000536429 CCR5P51681 352 aa13.38□□□□□ -0.27
PRKDC-206ENST00000536429 ARSEP51690 589 aa13.38□□□□□ -0.27
PRKDC-206ENST00000536429 NDST2P52849 883 aa13.38□□□□□ -0.27
PRKDC-206ENST00000536429 ATXN3P54252 364 aaPredicted RBP13.38□□□□□ -0.27
PRKDC-206ENST00000536429 GEMIN4P57678 1058 aaKnown RBP13.38□□□□□ -0.27
PRKDC-206ENST00000536429 MMRN1Q13201 1228 aa13.38□□□□□ -0.27
PRKDC-206ENST00000536429 KIF19Q2TAC6 998 aa13.38□□□□□ -0.27
PRKDC-206ENST00000536429 MYLK3Q32MK0 819 aa13.38□□□□□ -0.27
PRKDC-206ENST00000536429 PPM1JQ5JR12 505 aa13.38□□□□□ -0.27
PRKDC-206ENST00000536429 ERN2Q76MJ5 926 aaKnown RBP13.38□□□□□ -0.27
PRKDC-206ENST00000536429 PARS2Q7L3T8 475 aaKnown RBP13.38□□□□□ -0.27
PRKDC-206ENST00000536429 OR2AP1Q8NGE2 309 aa13.38□□□□□ -0.27
PRKDC-206ENST00000536429 TEKT4Q8WW24 435 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms