RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 HDDC3Q8N4P3 179 aa18.18■□□□□ 0.5
DDX55-204ENST00000536079 PDLIM2Q96JY6 352 aa18.18■□□□□ 0.5
DDX55-204ENST00000536079 HERPUD2Q9BSE4 406 aa18.18■□□□□ 0.5
DDX55-204ENST00000536079 SMOC1Q9H4F8 434 aa18.18■□□□□ 0.5
DDX55-204ENST00000536079 C6orf106Q9H6K1 298 aaPredicted RBP18.18■□□□□ 0.5
DDX55-204ENST00000536079 DDX56Q9NY93 547 aaKnown RBP18.18■□□□□ 0.5
DDX55-204ENST00000536079 IL36AQ9UHA7 158 aa18.18■□□□□ 0.5
DDX55-204ENST00000536079 PACSIN2Q9UNF0 486 aaPredicted RBP18.18■□□□□ 0.5
DDX55-204ENST00000536079 PLXND1Q9Y4D7 1925 aa18.17■□□□□ 0.5
DDX55-204ENST00000536079 TTC24A2A3L6 582 aaPredicted RBP18.17■□□□□ 0.5
DDX55-204ENST00000536079 ALOX15BO15296 676 aa18.17■□□□□ 0.5
DDX55-204ENST00000536079 RNASEH2AO75792 299 aaKnown RBP18.17■□□□□ 0.5
DDX55-204ENST00000536079 FTCDO95954 541 aa18.17■□□□□ 0.5
DDX55-204ENST00000536079 GSRP00390 522 aa18.17■□□□□ 0.5
DDX55-204ENST00000536079 C5AR1P21730 350 aa18.17■□□□□ 0.5
DDX55-204ENST00000536079 TGM1P22735 817 aa18.17■□□□□ 0.5
DDX55-204ENST00000536079 CTNNA1P35221 906 aaKnown RBP18.17■□□□□ 0.5
DDX55-204ENST00000536079 DHPSP49366 369 aaPredicted RBP18.17■□□□□ 0.5
DDX55-204ENST00000536079 PEX5P50542 639 aa18.17■□□□□ 0.5
DDX55-204ENST00000536079 GEMIN4P57678 1058 aaKnown RBP18.17■□□□□ 0.5
DDX55-204ENST00000536079 IL10RBQ08334 325 aa18.17■□□□□ 0.5
DDX55-204ENST00000536079 SLC10A7Q0GE19 358 aa18.17■□□□□ 0.5
DDX55-204ENST00000536079 GALNT2Q10471 571 aa18.17■□□□□ 0.5
DDX55-204ENST00000536079 CNTN1Q12860 1018 aa18.17■□□□□ 0.5
DDX55-204ENST00000536079 BYSLQ13895 437 aaKnown RBP18.17■□□□□ 0.5
DDX55-204ENST00000536079 GSE1Q14687 1217 aa18.17■□□□□ 0.5
DDX55-204ENST00000536079 MYLK3Q32MK0 819 aa18.17■□□□□ 0.5
DDX55-204ENST00000536079 SLC9A4Q6AI14 798 aa18.17■□□□□ 0.5
DDX55-204ENST00000536079 AADACL2Q6P093 401 aa18.17■□□□□ 0.5
DDX55-204ENST00000536079 SPOCD1Q6ZMY3 1216 aa18.17■□□□□ 0.5
DDX55-204ENST00000536079 B4GALNT4Q76KP1 1039 aa18.17■□□□□ 0.5
DDX55-204ENST00000536079 LPCAT2Q7L5N7 544 aa18.17■□□□□ 0.5
DDX55-204ENST00000536079 RFX6Q8HWS3 928 aa18.17■□□□□ 0.5
DDX55-204ENST00000536079 PGBD5Q8N414 524 aa18.17■□□□□ 0.5
DDX55-204ENST00000536079 RYBPQ8N488 228 aaPredicted RBP18.17■□□□□ 0.5
DDX55-204ENST00000536079 TSEN2Q8NCE0 465 aaKnown RBP18.17■□□□□ 0.5
DDX55-204ENST00000536079 TMIEQ8NEW7 156 aa18.17■□□□□ 0.5
DDX55-204ENST00000536079 OR2AP1Q8NGE2 309 aa18.17■□□□□ 0.5
DDX55-204ENST00000536079 KIAA1524Q8TCG1 905 aa18.17■□□□□ 0.5
DDX55-204ENST00000536079 GANCQ8TET4 914 aa18.17■□□□□ 0.5
DDX55-204ENST00000536079 ALG3Q92685 438 aa18.17■□□□□ 0.5
DDX55-204ENST00000536079 FAM131CQ96AQ9 280 aa18.17■□□□□ 0.5
DDX55-204ENST00000536079 HEPHQ9BQS7 1158 aa18.17■□□□□ 0.5
DDX55-204ENST00000536079 ARRDC1-AS1Q9H2J1 176 aa18.17■□□□□ 0.5
DDX55-204ENST00000536079 ZDHHC6Q9H6R6 413 aa18.17■□□□□ 0.5
DDX55-204ENST00000536079 SP110Q9HB58 689 aa18.17■□□□□ 0.5
DDX55-204ENST00000536079 PARD6AQ9NPB6 346 aa18.17■□□□□ 0.5
DDX55-204ENST00000536079 DTLQ9NZJ0 730 aa18.17■□□□□ 0.5
DDX55-204ENST00000536079 EVLQ9UI08 416 aaPredicted RBP18.17■□□□□ 0.5
DDX55-204ENST00000536079 RAB23Q9ULC3 237 aa18.17■□□□□ 0.5
DDX55-204ENST00000536079 PCDHA3Q9Y5H8 950 aa18.17■□□□□ 0.5
DDX55-204ENST00000536079 SLCO1B1Q9Y6L6 691 aa18.17■□□□□ 0.5
DDX55-204ENST00000536079 NUMA1Q14980 2115 aa18.17■□□□□ 0.5
DDX55-204ENST00000536079 ZNF487B1APH4 448 aa18.16■□□□□ 0.5
DDX55-204ENST00000536079 RHOBTB1O94844 696 aa18.16■□□□□ 0.5
DDX55-204ENST00000536079 EPN2O95208 641 aa18.16■□□□□ 0.5
DDX55-204ENST00000536079 ADH1BP00325 375 aa18.16■□□□□ 0.5
DDX55-204ENST00000536079 CTNNA2P26232 953 aa18.16■□□□□ 0.5
DDX55-204ENST00000536079 RHOAP61586 193 aa18.16■□□□□ 0.5
DDX55-204ENST00000536079 DYNLT1P63172 113 aa18.16■□□□□ 0.5
DDX55-204ENST00000536079 TTC31Q49AM3 519 aaPredicted RBP18.16■□□□□ 0.5
DDX55-204ENST00000536079 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.16■□□□□ 0.5
DDX55-204ENST00000536079 SLC36A4Q6YBV0 504 aa18.16■□□□□ 0.5
DDX55-204ENST00000536079 USP30Q70CQ3 517 aa18.16■□□□□ 0.5
DDX55-204ENST00000536079 VSIG1Q86XK7 387 aa18.16■□□□□ 0.5
DDX55-204ENST00000536079 PLPP6Q8IY26 295 aa18.16■□□□□ 0.5
DDX55-204ENST00000536079 CASKIN2Q8WXE0 1202 aa18.16■□□□□ 0.5
DDX55-204ENST00000536079 TMEM74BQ9NUR3 256 aa18.16■□□□□ 0.5
DDX55-204ENST00000536079 SAE1Q9UBE0 346 aaPredicted RBP18.16■□□□□ 0.5
DDX55-204ENST00000536079 GUCA1BQ9UMX6 200 aa18.16■□□□□ 0.5
DDX55-204ENST00000536079 ATXN2Q99700 1313 aaKnown RBP18.16■□□□□ 0.5
DDX55-204ENST00000536079 OTOGLQ3ZCN5 2332 aa18.15■□□□□ 0.5
DDX55-204ENST00000536079 C10orf142B7Z368 130 aa18.15■□□□□ 0.5
DDX55-204ENST00000536079 KPNA3O00505 521 aaPredicted RBP18.15■□□□□ 0.5
DDX55-204ENST00000536079 KRIT1O00522 736 aa18.15■□□□□ 0.5
DDX55-204ENST00000536079 DDX3YO15523 660 aaKnown RBP18.15■□□□□ 0.5
DDX55-204ENST00000536079 NDUFS2O75306 463 aa18.15■□□□□ 0.5
DDX55-204ENST00000536079 RETP07949 1114 aa18.15■□□□□ 0.5
DDX55-204ENST00000536079 ITPKAP23677 461 aa18.15■□□□□ 0.5
DDX55-204ENST00000536079 MAOBP27338 520 aa18.15■□□□□ 0.5
DDX55-204ENST00000536079 OXTRP30559 389 aa18.15■□□□□ 0.5
DDX55-204ENST00000536079 SERPINB6P35237 376 aa18.15■□□□□ 0.5
DDX55-204ENST00000536079 GARSP41250 739 aaKnown RBP18.15■□□□□ 0.5
DDX55-204ENST00000536079 RECQLP46063 649 aaPredicted RBP18.15■□□□□ 0.5
DDX55-204ENST00000536079 TAS2R38P59533 333 aa18.15■□□□□ 0.5
DDX55-204ENST00000536079 SNRPD1P62314 119 aaKnown RBP18.15■□□□□ 0.5
DDX55-204ENST00000536079 LBRQ14739 615 aaKnown RBP18.15■□□□□ 0.5
DDX55-204ENST00000536079 ELF2Q15723 593 aa18.15■□□□□ 0.5
DDX55-204ENST00000536079 PIP5KL1Q5T9C9 394 aa18.15■□□□□ 0.5
DDX55-204ENST00000536079 AGBL4Q5VU57 503 aa18.15■□□□□ 0.5
DDX55-204ENST00000536079 KAZNQ674X7 775 aa18.15■□□□□ 0.5
DDX55-204ENST00000536079 DSG4Q86SJ6 1040 aa18.15■□□□□ 0.5
DDX55-204ENST00000536079 C11orf74Q86VG3 221 aa18.15■□□□□ 0.5
DDX55-204ENST00000536079 ATPAF2Q8N5M1 289 aa18.15■□□□□ 0.5
DDX55-204ENST00000536079 CALR3Q96L12 384 aaKnown RBP18.15■□□□□ 0.5
DDX55-204ENST00000536079 HSPA12BQ96MM6 686 aa18.15■□□□□ 0.5
DDX55-204ENST00000536079 OMDQ99983 421 aa18.15■□□□□ 0.5
DDX55-204ENST00000536079 BTBD1Q9H0C5 482 aa18.15■□□□□ 0.5
DDX55-204ENST00000536079 SCML1Q9UN30 329 aa18.15■□□□□ 0.5
DDX55-204ENST00000536079 hCG_1818297A0A087WSY0 165 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms