RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 RBM43Q6ZSC3 357 aaKnown RBP13.38□□□□□ -0.27
RTN3-207ENST00000536011 DCP2Q8IU60 420 aaKnown RBP13.38□□□□□ -0.27
RTN3-207ENST00000536011 PLPP6Q8IY26 295 aa13.38□□□□□ -0.27
RTN3-207ENST00000536011 CHST14Q8NCH0 376 aa13.38□□□□□ -0.27
RTN3-207ENST00000536011 MDM1Q8TC05 714 aa13.38□□□□□ -0.27
RTN3-207ENST00000536011 ARRDC3Q96B67 414 aa13.38□□□□□ -0.27
RTN3-207ENST00000536011 TBC1D31Q96DN5 1066 aa13.38□□□□□ -0.27
RTN3-207ENST00000536011 ARHGEF26Q96DR7 871 aa13.38□□□□□ -0.27
RTN3-207ENST00000536011 IFT43Q96FT9 208 aa13.38□□□□□ -0.27
RTN3-207ENST00000536011 SELENOOQ9BVL4 669 aa13.38□□□□□ -0.27
RTN3-207ENST00000536011 MAGEH1Q9H213 219 aa13.38□□□□□ -0.27
RTN3-207ENST00000536011 EVA1BQ9NVM1 165 aa13.38□□□□□ -0.27
RTN3-207ENST00000536011 KLHL11Q9NVR0 708 aa13.38□□□□□ -0.27
RTN3-207ENST00000536011 FANCLQ9NW38 375 aa13.38□□□□□ -0.27
RTN3-207ENST00000536011 ADAM22Q9P0K1 906 aa13.38□□□□□ -0.27
RTN3-207ENST00000536011 ZNF212Q9UDV6 495 aa13.38□□□□□ -0.27
RTN3-207ENST00000536011 SIK3Q9Y2K2 1263 aa13.38□□□□□ -0.27
RTN3-207ENST00000536011 PLXNB3Q9ULL4 1909 aa13.38□□□□□ -0.27
RTN3-207ENST00000536011 CELSR3Q9NYQ7 3312 aa13.38□□□□□ -0.27
RTN3-207ENST00000536011 TRABD2BA6NFA1 517 aa13.37□□□□□ -0.27
RTN3-207ENST00000536011 A6NNZ2 444 aa13.37□□□□□ -0.27
RTN3-207ENST00000536011 TAF4O00268 1085 aa13.37□□□□□ -0.27
RTN3-207ENST00000536011 AP1G1O43747 822 aa13.37□□□□□ -0.27
RTN3-207ENST00000536011 ADRB3P13945 408 aa13.37□□□□□ -0.27
RTN3-207ENST00000536011 JUPP14923 745 aa13.37□□□□□ -0.27
RTN3-207ENST00000536011 CKMT2P17540 419 aa13.37□□□□□ -0.27
RTN3-207ENST00000536011 CHRNB2P17787 502 aa13.37□□□□□ -0.27
RTN3-207ENST00000536011 CDK11BP21127 795 aaKnown RBP13.37□□□□□ -0.27
RTN3-207ENST00000536011 L1CAMP32004 1257 aa13.37□□□□□ -0.27
RTN3-207ENST00000536011 KLK7P49862 253 aa13.37□□□□□ -0.27
RTN3-207ENST00000536011 COPB1P53618 953 aaKnown RBP13.37□□□□□ -0.27
RTN3-207ENST00000536011 ARF5P84085 180 aa13.37□□□□□ -0.27
RTN3-207ENST00000536011 UBXN1Q04323 297 aa13.37□□□□□ -0.27
RTN3-207ENST00000536011 C15orf59Q2T9L4 293 aaPredicted RBP13.37□□□□□ -0.27
RTN3-207ENST00000536011 CCDC14Q49A88 953 aa13.37□□□□□ -0.27
RTN3-207ENST00000536011 TMEM259Q4ZIN3 620 aa13.37□□□□□ -0.27
RTN3-207ENST00000536011 EFHC2Q5JST6 749 aa13.37□□□□□ -0.27
RTN3-207ENST00000536011 MANEALQ5VSG8 457 aa13.37□□□□□ -0.27
RTN3-207ENST00000536011 PPP1R2P3Q6NXS1 205 aa13.37□□□□□ -0.27
RTN3-207ENST00000536011 C3orf20Q8ND61 904 aa13.37□□□□□ -0.27
RTN3-207ENST00000536011 SLC30A5Q8TAD4 765 aa13.37□□□□□ -0.27
RTN3-207ENST00000536011 FAM172AQ8WUF8 416 aa13.37□□□□□ -0.27
RTN3-207ENST00000536011 SLC39A7Q92504 469 aa13.37□□□□□ -0.27
RTN3-207ENST00000536011 TSC1Q92574 1164 aa13.37□□□□□ -0.27
RTN3-207ENST00000536011 NTAN1Q96AB6 310 aa13.37□□□□□ -0.27
RTN3-207ENST00000536011 RAB7BQ96AH8 199 aa13.37□□□□□ -0.27
RTN3-207ENST00000536011 FEM1CQ96JP0 617 aa13.37□□□□□ -0.27
RTN3-207ENST00000536011 MYOCQ99972 504 aa13.37□□□□□ -0.27
RTN3-207ENST00000536011 CALN1Q9BXU9 219 aa13.37□□□□□ -0.27
RTN3-207ENST00000536011 OSBPL1AQ9BXW6 950 aa13.37□□□□□ -0.27
RTN3-207ENST00000536011 ZDHHC6Q9H6R6 413 aa13.37□□□□□ -0.27
RTN3-207ENST00000536011 SEPT11Q9NVA2 429 aaKnown RBP13.37□□□□□ -0.27
RTN3-207ENST00000536011 TMEM248Q9NWD8 314 aa13.37□□□□□ -0.27
RTN3-207ENST00000536011 HECAQ9UBI9 543 aaPredicted RBP13.37□□□□□ -0.27
RTN3-207ENST00000536011 LIMA1Q9UHB6 759 aaKnown RBP13.37□□□□□ -0.27
RTN3-207ENST00000536011 GPSM3Q9Y4H4 160 aa13.37□□□□□ -0.27
RTN3-207ENST00000536011 WASF2Q9Y6W5 498 aa13.37□□□□□ -0.27
RTN3-207ENST00000536011 APC2O95996 2303 aa13.37□□□□□ -0.27
RTN3-207ENST00000536011 GOLGA4Q13439 2230 aaKnown RBP13.36□□□□□ -0.27
RTN3-207ENST00000536011 FAM149AA5PLN7 773 aa13.36□□□□□ -0.27
RTN3-207ENST00000536011 NEMP1O14524 444 aa13.36□□□□□ -0.27
RTN3-207ENST00000536011 PLEKP08567 350 aaPredicted RBP13.36□□□□□ -0.27
RTN3-207ENST00000536011 UNGP13051 313 aaPredicted RBP13.36□□□□□ -0.27
RTN3-207ENST00000536011 GPD1P21695 349 aa13.36□□□□□ -0.27
RTN3-207ENST00000536011 AIF1P55008 147 aa13.36□□□□□ -0.27
RTN3-207ENST00000536011 SNRPD1P62314 119 aaKnown RBP13.36□□□□□ -0.27
RTN3-207ENST00000536011 BNIP3Q12983 259 aa13.36□□□□□ -0.27
RTN3-207ENST00000536011 DNAJC3Q13217 504 aa13.36□□□□□ -0.27
RTN3-207ENST00000536011 ZNF211Q13398 564 aaPredicted RBP13.36□□□□□ -0.27
RTN3-207ENST00000536011 CAMK2BQ13554 666 aa13.36□□□□□ -0.27
RTN3-207ENST00000536011 CLEC16AQ2KHT3 1053 aa13.36□□□□□ -0.27
RTN3-207ENST00000536011 DNAJC24Q6P3W2 148 aa13.36□□□□□ -0.27
RTN3-207ENST00000536011 KANSL1Q7Z3B3 1105 aa13.36□□□□□ -0.27
RTN3-207ENST00000536011 NLRP14Q86W24 1093 aa13.36□□□□□ -0.27
RTN3-207ENST00000536011 ZNF354CQ86Y25 554 aa13.36□□□□□ -0.27
RTN3-207ENST00000536011 PHF13Q86YI8 300 aaPredicted RBP13.36□□□□□ -0.27
RTN3-207ENST00000536011 RYBPQ8N488 228 aaPredicted RBP13.36□□□□□ -0.27
RTN3-207ENST00000536011 GPT2Q8TD30 523 aa13.36□□□□□ -0.27
RTN3-207ENST00000536011 CASKIN2Q8WXE0 1202 aa13.36□□□□□ -0.27
RTN3-207ENST00000536011 CENPIQ92674 756 aaPredicted RBP13.36□□□□□ -0.27
RTN3-207ENST00000536011 KLK6Q92876 244 aa13.36□□□□□ -0.27
RTN3-207ENST00000536011 NAT10Q9H0A0 1025 aaKnown RBP13.36□□□□□ -0.27
RTN3-207ENST00000536011 SCUBE2Q9NQ36 999 aa13.36□□□□□ -0.27
RTN3-207ENST00000536011 DONSONQ9NYP3 566 aa13.36□□□□□ -0.27
RTN3-207ENST00000536011 DNAI1Q9UI46 699 aa13.36□□□□□ -0.27
RTN3-207ENST00000536011 METRNQ9UJH8 293 aa13.36□□□□□ -0.27
RTN3-207ENST00000536011 RAXQ9Y2V3 346 aa13.36□□□□□ -0.27
RTN3-207ENST00000536011 FCF1Q9Y324 198 aaKnown RBP13.36□□□□□ -0.27
RTN3-207ENST00000536011 CACNA1GO43497 2377 aa13.35□□□□□ -0.27
RTN3-207ENST00000536011 NEMP2A6NFY4 417 aa13.35□□□□□ -0.27
RTN3-207ENST00000536011 H3BM21 787 aa13.35□□□□□ -0.27
RTN3-207ENST00000536011 RIOK3O14730 519 aaKnown RBP13.35□□□□□ -0.27
RTN3-207ENST00000536011 EPHB6O15197 1021 aa13.35□□□□□ -0.27
RTN3-207ENST00000536011 TSPAN6O43657 245 aa13.35□□□□□ -0.27
RTN3-207ENST00000536011 SDC3O75056 442 aa13.35□□□□□ -0.27
RTN3-207ENST00000536011 ZNF821O75541 412 aaPredicted RBP13.35□□□□□ -0.27
RTN3-207ENST00000536011 LRIG2O94898 1065 aa13.35□□□□□ -0.27
RTN3-207ENST00000536011 MBD3O95983 291 aa13.35□□□□□ -0.27
RTN3-207ENST00000536011 GSRP00390 522 aa13.35□□□□□ -0.27
RTN3-207ENST00000536011 PYGBP11216 843 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms