RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 DPH1Q9BZG8 443 aa13.24□□□□□ -0.29
TNFRSF1A-207ENST00000535958 CEP44Q9C0F1 390 aa13.24□□□□□ -0.29
TNFRSF1A-207ENST00000535958 ZDHHC6Q9H6R6 413 aa13.24□□□□□ -0.29
TNFRSF1A-207ENST00000535958 SYNDIG1Q9H7V2 258 aa13.24□□□□□ -0.29
TNFRSF1A-207ENST00000535958 CPNE5Q9HCH3 593 aa13.24□□□□□ -0.29
TNFRSF1A-207ENST00000535958 ATP13A1Q9HD20 1204 aa13.24□□□□□ -0.29
TNFRSF1A-207ENST00000535958 ARHGEF38Q9NXL2 777 aa13.24□□□□□ -0.29
TNFRSF1A-207ENST00000535958 ZFR2Q9UPR6 939 aaKnown RBP13.24□□□□□ -0.29
TNFRSF1A-207ENST00000535958 HS3ST3A1Q9Y663 406 aa13.24□□□□□ -0.29
TNFRSF1A-207ENST00000535958 A0A0D9SEW6 157 aa13.23□□□□□ -0.29
TNFRSF1A-207ENST00000535958 BECN2A8MW95 431 aa13.23□□□□□ -0.29
TNFRSF1A-207ENST00000535958 J3QKU1 62 aa13.23□□□□□ -0.29
TNFRSF1A-207ENST00000535958 AQP9O43315 295 aa13.23□□□□□ -0.29
TNFRSF1A-207ENST00000535958 SRGAP2O75044 1071 aa13.23□□□□□ -0.29
TNFRSF1A-207ENST00000535958 DXOO77932 396 aaKnown RBP13.23□□□□□ -0.29
TNFRSF1A-207ENST00000535958 CSF2P04141 144 aa13.23□□□□□ -0.29
TNFRSF1A-207ENST00000535958 MYF5P13349 255 aa13.23□□□□□ -0.29
TNFRSF1A-207ENST00000535958 NME1P15531 152 aaKnown RBP13.23□□□□□ -0.29
TNFRSF1A-207ENST00000535958 SLC9A1P19634 815 aa13.23□□□□□ -0.29
TNFRSF1A-207ENST00000535958 ITGB7P26010 798 aa13.23□□□□□ -0.29
TNFRSF1A-207ENST00000535958 MTIF2P46199 727 aaKnown RBP13.23□□□□□ -0.29
TNFRSF1A-207ENST00000535958 RPIAP49247 311 aa13.23□□□□□ -0.29
TNFRSF1A-207ENST00000535958 THOP1P52888 689 aa13.23□□□□□ -0.29
TNFRSF1A-207ENST00000535958 BECN1Q14457 450 aa13.23□□□□□ -0.29
TNFRSF1A-207ENST00000535958 CDKN3Q16667 212 aa13.23□□□□□ -0.29
TNFRSF1A-207ENST00000535958 TPD52L1Q16890 204 aaPredicted RBP13.23□□□□□ -0.29
TNFRSF1A-207ENST00000535958 PTPN20Q4JDL3 420 aa13.23□□□□□ -0.29
TNFRSF1A-207ENST00000535958 TMEM259Q4ZIN3 620 aa13.23□□□□□ -0.29
TNFRSF1A-207ENST00000535958 FOXR1Q6PIV2 292 aa13.23□□□□□ -0.29
TNFRSF1A-207ENST00000535958 ZNF783Q6ZMS7 281 aa13.23□□□□□ -0.29
TNFRSF1A-207ENST00000535958 RBM44Q6ZP01 1051 aaKnown RBP13.23□□□□□ -0.29
TNFRSF1A-207ENST00000535958 EFL1Q7Z2Z2 1120 aaKnown RBP13.23□□□□□ -0.29
TNFRSF1A-207ENST00000535958 PCDH20Q8N6Y1 951 aaKnown RBP13.23□□□□□ -0.29
TNFRSF1A-207ENST00000535958 TMEM35BQ8NCS4 154 aa13.23□□□□□ -0.29
TNFRSF1A-207ENST00000535958 OR7D4Q8NG98 312 aa13.23□□□□□ -0.29
TNFRSF1A-207ENST00000535958 LMX1AQ8TE12 382 aa13.23□□□□□ -0.29
TNFRSF1A-207ENST00000535958 BTN2A2Q8WVV5 523 aa13.23□□□□□ -0.29
TNFRSF1A-207ENST00000535958 SHC3Q92529 594 aa13.23□□□□□ -0.29
TNFRSF1A-207ENST00000535958 GRAMD1AQ96CP6 724 aa13.23□□□□□ -0.29
TNFRSF1A-207ENST00000535958 HIC2Q96JB3 615 aa13.23□□□□□ -0.29
TNFRSF1A-207ENST00000535958 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.23□□□□□ -0.29
TNFRSF1A-207ENST00000535958 MPP6Q9NZW5 540 aa13.23□□□□□ -0.29
TNFRSF1A-207ENST00000535958 SATB2Q9UPW6 733 aa13.23□□□□□ -0.29
TNFRSF1A-207ENST00000535958 ILVBLA1L0T0 632 aa13.22□□□□□ -0.29
TNFRSF1A-207ENST00000535958 PAK4O96013 591 aaPredicted RBP13.22□□□□□ -0.29
TNFRSF1A-207ENST00000535958 JUNDP17535 347 aa13.22□□□□□ -0.29
TNFRSF1A-207ENST00000535958 L1CAMP32004 1257 aa13.22□□□□□ -0.29
TNFRSF1A-207ENST00000535958 ETFBP38117 255 aa13.22□□□□□ -0.29
TNFRSF1A-207ENST00000535958 CXCR3P49682 368 aa13.22□□□□□ -0.29
TNFRSF1A-207ENST00000535958 SERPINH1P50454 418 aaKnown RBP13.22□□□□□ -0.29
TNFRSF1A-207ENST00000535958 CCNHP51946 323 aaPredicted RBP13.22□□□□□ -0.29
TNFRSF1A-207ENST00000535958 BPIFB4P59827 614 aa13.22□□□□□ -0.29
TNFRSF1A-207ENST00000535958 SLC20A2Q08357 652 aa13.22□□□□□ -0.29
TNFRSF1A-207ENST00000535958 PTK2BQ14289 1009 aa13.22□□□□□ -0.29
TNFRSF1A-207ENST00000535958 NR0B2Q15466 257 aa13.22□□□□□ -0.29
TNFRSF1A-207ENST00000535958 ISXQ2M1V0 245 aa13.22□□□□□ -0.29
TNFRSF1A-207ENST00000535958 DEFB133Q30KQ1 61 aa13.22□□□□□ -0.29
TNFRSF1A-207ENST00000535958 CARD16Q5EG05 197 aa13.22□□□□□ -0.29
TNFRSF1A-207ENST00000535958 ARL14Q8N4G2 192 aa13.22□□□□□ -0.29
TNFRSF1A-207ENST00000535958 WDTC1Q8N5D0 677 aa13.22□□□□□ -0.29
TNFRSF1A-207ENST00000535958 ARHGEF26Q96DR7 871 aa13.22□□□□□ -0.29
TNFRSF1A-207ENST00000535958 WBP1Q96G27 269 aa13.22□□□□□ -0.29
TNFRSF1A-207ENST00000535958 TBCBQ99426 244 aa13.22□□□□□ -0.29
TNFRSF1A-207ENST00000535958 NPY6RQ99463 290 aa13.22□□□□□ -0.29
TNFRSF1A-207ENST00000535958 ZYG11BQ9C0D3 744 aa13.22□□□□□ -0.29
TNFRSF1A-207ENST00000535958 PLCB1Q9NQ66 1216 aa13.22□□□□□ -0.29
TNFRSF1A-207ENST00000535958 SPASTQ9UBP0 616 aa13.22□□□□□ -0.29
TNFRSF1A-207ENST00000535958 FADS3Q9Y5Q0 445 aa13.22□□□□□ -0.29
TNFRSF1A-207ENST00000535958 SNX10Q9Y5X0 201 aa13.22□□□□□ -0.29
TNFRSF1A-207ENST00000535958 CSNK1G3Q9Y6M4 447 aa13.22□□□□□ -0.29
TNFRSF1A-207ENST00000535958 WASF2Q9Y6W5 498 aa13.22□□□□□ -0.29
TNFRSF1A-207ENST00000535958 TRPM6Q9BX84 2022 aa13.22□□□□□ -0.29
TNFRSF1A-207ENST00000535958 SPTY2D1-AS1A0A0U1RR47 76 aa13.21□□□□□ -0.29
TNFRSF1A-207ENST00000535958 GTPBP10A4D1E9 387 aaKnown RBP13.21□□□□□ -0.29
TNFRSF1A-207ENST00000535958 POM121BA6NF01 834 aa13.21□□□□□ -0.29
TNFRSF1A-207ENST00000535958 DRGXA6NNA5 263 aa13.21□□□□□ -0.29
TNFRSF1A-207ENST00000535958 TSPAN6O43657 245 aa13.21□□□□□ -0.29
TNFRSF1A-207ENST00000535958 AP1G1O43747 822 aa13.21□□□□□ -0.29
TNFRSF1A-207ENST00000535958 GIMD1P0DJR0 217 aa13.21□□□□□ -0.29
TNFRSF1A-207ENST00000535958 BMP6P22004 513 aa13.21□□□□□ -0.29
TNFRSF1A-207ENST00000535958 GEMIN4P57678 1058 aaKnown RBP13.21□□□□□ -0.29
TNFRSF1A-207ENST00000535958 VAC14Q08AM6 782 aa13.21□□□□□ -0.29
TNFRSF1A-207ENST00000535958 FZD2Q14332 565 aa13.21□□□□□ -0.29
TNFRSF1A-207ENST00000535958 POLD3Q15054 466 aaPredicted RBP13.21□□□□□ -0.29
TNFRSF1A-207ENST00000535958 SLC25A52Q3SY17 297 aa13.21□□□□□ -0.29
TNFRSF1A-207ENST00000535958 SMYD5Q6GMV2 418 aa13.21□□□□□ -0.29
TNFRSF1A-207ENST00000535958 GUSBP11Q6P575 273 aa13.21□□□□□ -0.29
TNFRSF1A-207ENST00000535958 PARS2Q7L3T8 475 aaKnown RBP13.21□□□□□ -0.29
TNFRSF1A-207ENST00000535958 SLC47A2Q86VL8 602 aa13.21□□□□□ -0.29
TNFRSF1A-207ENST00000535958 ZNF354CQ86Y25 554 aa13.21□□□□□ -0.29
TNFRSF1A-207ENST00000535958 DRC7Q8IY82 874 aa13.21□□□□□ -0.29
TNFRSF1A-207ENST00000535958 DENND6BQ8NEG7 585 aa13.21□□□□□ -0.29
TNFRSF1A-207ENST00000535958 WDR48Q8TAF3 677 aa13.21□□□□□ -0.29
TNFRSF1A-207ENST00000535958 NAT6Q93015 286 aa13.21□□□□□ -0.29
TNFRSF1A-207ENST00000535958 RAB7BQ96AH8 199 aa13.21□□□□□ -0.29
TNFRSF1A-207ENST00000535958 PGAP3Q96FM1 320 aaPredicted RBP13.21□□□□□ -0.29
TNFRSF1A-207ENST00000535958 C1orf74Q96LT6 269 aa13.21□□□□□ -0.29
TNFRSF1A-207ENST00000535958 C1QTNF7Q9BXJ2 289 aa13.21□□□□□ -0.29
TNFRSF1A-207ENST00000535958 SLC13A1Q9BZW2 595 aa13.21□□□□□ -0.29
TNFRSF1A-207ENST00000535958 TM6SF2Q9BZW4 377 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms