RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 HOXB9P17482 250 aaPredicted RBP3.6□□□□□ -1.83
SNHG1-202ENST00000535689 TFEBP19484 476 aa3.6□□□□□ -1.83
SNHG1-202ENST00000535689 GSTM2P28161 218 aa3.6□□□□□ -1.83
SNHG1-202ENST00000535689 GALNSP34059 522 aa3.6□□□□□ -1.83
SNHG1-202ENST00000535689 PNPLA4P41247 253 aa3.6□□□□□ -1.83
SNHG1-202ENST00000535689 RPS6KA3P51812 740 aa3.6□□□□□ -1.83
SNHG1-202ENST00000535689 RCAN1P53805 252 aa3.6□□□□□ -1.83
SNHG1-202ENST00000535689 UBE3AQ05086 875 aa3.6□□□□□ -1.83
SNHG1-202ENST00000535689 TBX2Q13207 712 aaPredicted RBP3.6□□□□□ -1.83
SNHG1-202ENST00000535689 CCL15Q16663 113 aa3.6□□□□□ -1.83
SNHG1-202ENST00000535689 BTBD16Q32M84 506 aa3.6□□□□□ -1.83
SNHG1-202ENST00000535689 ANXA2RQ3ZCQ2 193 aa3.6□□□□□ -1.83
SNHG1-202ENST00000535689 RUNDC3AQ59EK9 446 aa3.6□□□□□ -1.83
SNHG1-202ENST00000535689 PRAMEF17Q5VTA0 474 aa3.6□□□□□ -1.83
SNHG1-202ENST00000535689 MIS18BP1Q6P0N0 1132 aa3.6□□□□□ -1.83
SNHG1-202ENST00000535689 CYP26C1Q6V0L0 522 aa3.6□□□□□ -1.83
SNHG1-202ENST00000535689 DPY19L3Q6ZPD9 716 aa3.6□□□□□ -1.83
SNHG1-202ENST00000535689 MMS22LQ6ZRQ5 1243 aa3.6□□□□□ -1.83
SNHG1-202ENST00000535689 COPS6Q7L5N1 327 aa3.6□□□□□ -1.83
SNHG1-202ENST00000535689 RASGRP2Q7LDG7 609 aa3.6□□□□□ -1.83
SNHG1-202ENST00000535689 ANKS1BQ7Z6G8 1248 aa3.6□□□□□ -1.83
SNHG1-202ENST00000535689 UBE2Q1Q7Z7E8 422 aa3.6□□□□□ -1.83
SNHG1-202ENST00000535689 IGFN1Q86VF2 1251 aa3.6□□□□□ -1.83
SNHG1-202ENST00000535689 SLC2A12Q8TD20 617 aa3.6□□□□□ -1.83
SNHG1-202ENST00000535689 ASB12Q8WXK4 309 aa3.6□□□□□ -1.83
SNHG1-202ENST00000535689 NCSTNQ92542 709 aa3.6□□□□□ -1.83
SNHG1-202ENST00000535689 OPTNQ96CV9 577 aa3.6□□□□□ -1.83
SNHG1-202ENST00000535689 ZG16BQ96DA0 208 aa3.6□□□□□ -1.83
SNHG1-202ENST00000535689 P2RY11Q96G91 374 aa3.6□□□□□ -1.83
SNHG1-202ENST00000535689 WDYHV1Q96HA8 205 aa3.6□□□□□ -1.83
SNHG1-202ENST00000535689 PPP1R10Q96QC0 940 aaKnown RBP3.6□□□□□ -1.83
SNHG1-202ENST00000535689 CD180Q99467 661 aa3.6□□□□□ -1.83
SNHG1-202ENST00000535689 MRIQ9BWK5 157 aa3.6□□□□□ -1.83
SNHG1-202ENST00000535689 TWSG1Q9GZX9 223 aa3.6□□□□□ -1.83
SNHG1-202ENST00000535689 UBA5Q9GZZ9 404 aa3.6□□□□□ -1.83
SNHG1-202ENST00000535689 VPS45Q9NRW7 570 aa3.6□□□□□ -1.83
SNHG1-202ENST00000535689 ARPP21Q9UBL0 812 aaPredicted RBP3.6□□□□□ -1.83
SNHG1-202ENST00000535689 GRHPRQ9UBQ7 328 aa3.6□□□□□ -1.83
SNHG1-202ENST00000535689 ZNF69Q9UC07 566 aa3.6□□□□□ -1.83
SNHG1-202ENST00000535689 SLC25A13Q9UJS0 675 aa3.6□□□□□ -1.83
SNHG1-202ENST00000535689 DAPP1Q9UN19 280 aa3.6□□□□□ -1.83
SNHG1-202ENST00000535689 VPS4AQ9UN37 437 aa3.6□□□□□ -1.83
SNHG1-202ENST00000535689 UBN2Q6ZU65 1347 aa3.6□□□□□ -1.83
SNHG1-202ENST00000535689 LAMB4A4D0S4 1761 aa3.6□□□□□ -1.83
SNHG1-202ENST00000535689 RANBP2P49792 3224 aaKnown RBP3.6□□□□□ -1.83
SNHG1-202ENST00000535689 HTTP42858 3142 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 LRRC37AA6NMS7 1700 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 LOC105369274A0A096LPK9 316 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 LOC102723532A0A0G2JNH3 316 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 FAM90A18PA6NE21 464 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 FAM90A16PA6NEW6 464 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 TTC36A6NLP5 189 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 FAM90A9PA6NNJ1 464 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 SLC38A8A6NNN8 435 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 FAM90A5PA8MXJ8 464 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 KIF28PB7ZC32 967 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 PRPF4O43172 522 aaKnown RBP eCLIP3.59□□□□□ -1.83
SNHG1-202ENST00000535689 DHHO43323 396 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 PIP5K1CO60331 668 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 PDE8BO95263 885 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 IGLV2-14P01704 120 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 FAM90A15PP0C7V4 464 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 FAM90A14PP0C7W9 464 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 APEHP13798 732 aaKnown RBP3.59□□□□□ -1.83
SNHG1-202ENST00000535689 EIF2S2P20042 333 aaKnown RBP3.59□□□□□ -1.83
SNHG1-202ENST00000535689 KLRK1P26718 216 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 PCSK6P29122 969 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 VPS41P49754 854 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 RPL15P61313 204 aaKnown RBP3.59□□□□□ -1.83
SNHG1-202ENST00000535689 FKBP1AP62942 108 aaKnown RBP3.59□□□□□ -1.83
SNHG1-202ENST00000535689 CYP4F2P78329 520 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 NHLH1Q02575 133 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 GHRHRQ02643 423 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.59□□□□□ -1.83
SNHG1-202ENST00000535689 SLC12A1Q13621 1099 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 RNASE12Q5GAN4 147 aaKnown RBP3.59□□□□□ -1.83
SNHG1-202ENST00000535689 C10orf76Q5T2E6 689 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 GRHL2Q6ISB3 625 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 AADACL2Q6P093 401 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 DENND1BQ6P3S1 775 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 MOGAT3Q86VF5 341 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 ERO1BQ86YB8 467 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 FAM185AQ8N0U4 392 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 OR4N4Q8N0Y3 316 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 BOLLQ8N9W6 283 aaKnown RBP3.59□□□□□ -1.83
SNHG1-202ENST00000535689 PNLDC1Q8NA58 520 aaKnown RBP3.59□□□□□ -1.83
SNHG1-202ENST00000535689 NAXEQ8NCW5 288 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 ZFYVE19Q96K21 471 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 UBXN10Q96LJ8 280 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 ABHD14AQ9BUJ0 271 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 ANKRD2Q9GZV1 360 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 PDCL3Q9H2J4 239 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 KLK15Q9H2R5 256 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 TMPRSS5Q9H3S3 457 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 CHODLQ9H9P2 273 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 JMJD4Q9H9V9 463 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 SAP30LQ9HAJ7 183 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 RIC8AQ9NPQ8 531 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 NRIP3Q9NQ35 241 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 ASB6Q9NWX5 421 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms