RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 C18orf8Q96DM3 657 aa11.45□□□□□ -0.58
CLSTN3-206ENST00000535668 CRELD1Q96HD1 420 aa11.45□□□□□ -0.58
CLSTN3-206ENST00000535668 FEM1CQ96JP0 617 aa11.45□□□□□ -0.58
CLSTN3-206ENST00000535668 SLC17A9Q9BYT1 436 aa11.45□□□□□ -0.58
CLSTN3-206ENST00000535668 MUC3BQ9H195 1237 aa11.45□□□□□ -0.58
CLSTN3-206ENST00000535668 POLR1BQ9H9Y6 1135 aa11.45□□□□□ -0.58
CLSTN3-206ENST00000535668 ASCL3Q9NQ33 180 aa11.45□□□□□ -0.58
CLSTN3-206ENST00000535668 EVA1BQ9NVM1 165 aa11.45□□□□□ -0.58
CLSTN3-206ENST00000535668 UCKL1Q9NWZ5 548 aa11.45□□□□□ -0.58
CLSTN3-206ENST00000535668 IL36AQ9UHA7 158 aa11.45□□□□□ -0.58
CLSTN3-206ENST00000535668 PCDHGA8Q9Y5G5 932 aa11.45□□□□□ -0.58
CLSTN3-206ENST00000535668 RAI2Q9Y5P3 530 aa11.45□□□□□ -0.58
CLSTN3-206ENST00000535668 AK5Q9Y6K8 562 aa11.45□□□□□ -0.58
CLSTN3-206ENST00000535668 PTPN13Q12923 2485 aa11.44□□□□□ -0.58
CLSTN3-206ENST00000535668 EME2A4GXA9 379 aaPredicted RBP11.44□□□□□ -0.58
CLSTN3-206ENST00000535668 K7ESM1 405 aa11.44□□□□□ -0.58
CLSTN3-206ENST00000535668 AREL1O15033 823 aa11.44□□□□□ -0.58
CLSTN3-206ENST00000535668 SNAP91O60641 907 aa11.44□□□□□ -0.58
CLSTN3-206ENST00000535668 RHOCP08134 193 aa11.44□□□□□ -0.58
CLSTN3-206ENST00000535668 ADRB3P13945 408 aa11.44□□□□□ -0.58
CLSTN3-206ENST00000535668 ZNF18P17022 549 aa11.44□□□□□ -0.58
CLSTN3-206ENST00000535668 MAT2AP31153 395 aaKnown RBP11.44□□□□□ -0.58
CLSTN3-206ENST00000535668 GSCP56915 257 aaPredicted RBP11.44□□□□□ -0.58
CLSTN3-206ENST00000535668 GEMIN4P57678 1058 aaKnown RBP11.44□□□□□ -0.58
CLSTN3-206ENST00000535668 PCBP4P57723 403 aaKnown RBP11.44□□□□□ -0.58
CLSTN3-206ENST00000535668 RHDQ02161 417 aa11.44□□□□□ -0.58
CLSTN3-206ENST00000535668 SEMG2Q02383 582 aa11.44□□□□□ -0.58
CLSTN3-206ENST00000535668 FGL2Q14314 439 aa11.44□□□□□ -0.58
CLSTN3-206ENST00000535668 AGERQ15109 404 aa11.44□□□□□ -0.58
CLSTN3-206ENST00000535668 HS1BP3Q53T59 392 aa11.44□□□□□ -0.58
CLSTN3-206ENST00000535668 ISM2Q6H9L7 571 aa11.44□□□□□ -0.58
CLSTN3-206ENST00000535668 OR6B2Q6IFH4 312 aa11.44□□□□□ -0.58
CLSTN3-206ENST00000535668 GJB7Q6PEY0 223 aa11.44□□□□□ -0.58
CLSTN3-206ENST00000535668 PARGQ86W56 976 aa11.44□□□□□ -0.58
CLSTN3-206ENST00000535668 XYLT1Q86Y38 959 aa11.44□□□□□ -0.58
CLSTN3-206ENST00000535668 HCAR2Q8TDS4 363 aa11.44□□□□□ -0.58
CLSTN3-206ENST00000535668 CENPIQ92674 756 aaPredicted RBP11.44□□□□□ -0.58
CLSTN3-206ENST00000535668 CENPTQ96BT3 561 aa11.44□□□□□ -0.58
CLSTN3-206ENST00000535668 ARHGEF26Q96DR7 871 aa11.44□□□□□ -0.58
CLSTN3-206ENST00000535668 APOLD1Q96LR9 279 aa11.44□□□□□ -0.58
CLSTN3-206ENST00000535668 FCRL3Q96P31 734 aaPredicted RBP11.44□□□□□ -0.58
CLSTN3-206ENST00000535668 DEPDC7Q96QD5 511 aa11.44□□□□□ -0.58
CLSTN3-206ENST00000535668 HEPHQ9BQS7 1158 aa11.44□□□□□ -0.58
CLSTN3-206ENST00000535668 CRACR2AQ9BSW2 395 aa11.44□□□□□ -0.58
CLSTN3-206ENST00000535668 BOCQ9BWV1 1114 aa11.44□□□□□ -0.58
CLSTN3-206ENST00000535668 ZYG11BQ9C0D3 744 aa11.44□□□□□ -0.58
CLSTN3-206ENST00000535668 OSBPL2Q9H1P3 480 aa11.44□□□□□ -0.58
CLSTN3-206ENST00000535668 ACSL6Q9UKU0 697 aa11.44□□□□□ -0.58
CLSTN3-206ENST00000535668 MFHAS1Q9Y4C4 1052 aa11.44□□□□□ -0.58
CLSTN3-206ENST00000535668 EIF4E1BA6NMX2 242 aaKnown RBP11.43□□□□□ -0.58
CLSTN3-206ENST00000535668 K7ERQ8 282 aa11.43□□□□□ -0.58
CLSTN3-206ENST00000535668 RNF103O00237 685 aa11.43□□□□□ -0.58
CLSTN3-206ENST00000535668 KPNA3O00505 521 aaPredicted RBP11.43□□□□□ -0.58
CLSTN3-206ENST00000535668 SLC31A1O15431 190 aa11.43□□□□□ -0.58
CLSTN3-206ENST00000535668 LEFTY1O75610 366 aa11.43□□□□□ -0.58
CLSTN3-206ENST00000535668 GRAP2O75791 330 aa11.43□□□□□ -0.58
CLSTN3-206ENST00000535668 GSRP00390 522 aa11.43□□□□□ -0.58
CLSTN3-206ENST00000535668 CYP11B1P15538 503 aa11.43□□□□□ -0.58
CLSTN3-206ENST00000535668 TFE3P19532 575 aaPredicted RBP11.43□□□□□ -0.58
CLSTN3-206ENST00000535668 RRM1P23921 792 aa11.43□□□□□ -0.58
CLSTN3-206ENST00000535668 ERCC5P28715 1186 aaPredicted RBP11.43□□□□□ -0.58
CLSTN3-206ENST00000535668 OR1E1P30953 314 aa11.43□□□□□ -0.58
CLSTN3-206ENST00000535668 FLT3P36888 993 aa11.43□□□□□ -0.58
CLSTN3-206ENST00000535668 MAPKAPK2P49137 400 aa11.43□□□□□ -0.58
CLSTN3-206ENST00000535668 SUOXP51687 545 aa11.43□□□□□ -0.58
CLSTN3-206ENST00000535668 STX17P56962 302 aa11.43□□□□□ -0.58
CLSTN3-206ENST00000535668 YPEL5P62699 121 aa11.43□□□□□ -0.58
CLSTN3-206ENST00000535668 ARF5P84085 180 aa11.43□□□□□ -0.58
CLSTN3-206ENST00000535668 GNA12Q03113 381 aa11.43□□□□□ -0.58
CLSTN3-206ENST00000535668 NME3Q13232 169 aa11.43□□□□□ -0.58
CLSTN3-206ENST00000535668 BECN1Q14457 450 aa11.43□□□□□ -0.58
CLSTN3-206ENST00000535668 MAN2A1Q16706 1144 aa11.43□□□□□ -0.58
CLSTN3-206ENST00000535668 ISXQ2M1V0 245 aa11.43□□□□□ -0.58
CLSTN3-206ENST00000535668 CARD16Q5EG05 197 aa11.43□□□□□ -0.58
CLSTN3-206ENST00000535668 ARSIQ5FYB1 569 aa11.43□□□□□ -0.58
CLSTN3-206ENST00000535668 MIIPQ5JXC2 388 aa11.43□□□□□ -0.58
CLSTN3-206ENST00000535668 Q6ZSR6 202 aa11.43□□□□□ -0.58
CLSTN3-206ENST00000535668 CLEC14AQ86T13 490 aa11.43□□□□□ -0.58
CLSTN3-206ENST00000535668 NLRP14Q86W24 1093 aa11.43□□□□□ -0.58
CLSTN3-206ENST00000535668 ZNF677Q86XU0 584 aa11.43□□□□□ -0.58
CLSTN3-206ENST00000535668 CHST14Q8NCH0 376 aa11.43□□□□□ -0.58
CLSTN3-206ENST00000535668 CASKIN2Q8WXE0 1202 aa11.43□□□□□ -0.58
CLSTN3-206ENST00000535668 SLC46A1Q96NT5 459 aa11.43□□□□□ -0.58
CLSTN3-206ENST00000535668 DYRK4Q9NR20 520 aa11.43□□□□□ -0.58
CLSTN3-206ENST00000535668 DNAJC12Q9UKB3 198 aa11.43□□□□□ -0.58
CLSTN3-206ENST00000535668 NEU3Q9UQ49 428 aa11.43□□□□□ -0.58
CLSTN3-206ENST00000535668 DAAM1Q9Y4D1 1078 aa11.43□□□□□ -0.58
CLSTN3-206ENST00000535668 TDRD6O60522 2096 aaKnown RBP11.42□□□□□ -0.58
CLSTN3-206ENST00000535668 POM121BA6NF01 834 aa11.42□□□□□ -0.58
CLSTN3-206ENST00000535668 CDRT15L2A8MXV6 281 aa11.42□□□□□ -0.58
CLSTN3-206ENST00000535668 LMO7DNF2Z398 122 aa11.42□□□□□ -0.58
CLSTN3-206ENST00000535668 PRLRP16471 622 aa11.42□□□□□ -0.58
CLSTN3-206ENST00000535668 PTPN9P43378 593 aa11.42□□□□□ -0.58
CLSTN3-206ENST00000535668 RECQLP46063 649 aaPredicted RBP11.42□□□□□ -0.58
CLSTN3-206ENST00000535668 CLDN6P56747 220 aa11.42□□□□□ -0.58
CLSTN3-206ENST00000535668 DEUP1Q05D60 604 aa11.42□□□□□ -0.58
CLSTN3-206ENST00000535668 ARHGAP44Q17R89 818 aa11.42□□□□□ -0.58
CLSTN3-206ENST00000535668 INO80DQ53TQ3 878 aaPredicted RBP11.42□□□□□ -0.58
CLSTN3-206ENST00000535668 KLHDC7AQ5VTJ3 777 aa11.42□□□□□ -0.58
CLSTN3-206ENST00000535668 SEL1L3Q68CR1 1132 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms