RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 RNF103O00237 685 aa10.29□□□□□ -0.76
CLSTN3-203ENST00000534830 KLK10O43240 276 aa10.29□□□□□ -0.76
CLSTN3-203ENST00000534830 SMAD6O43541 496 aaKnown RBP10.29□□□□□ -0.76
CLSTN3-203ENST00000534830 RTN2O75298 545 aa10.29□□□□□ -0.76
CLSTN3-203ENST00000534830 CD160O95971 181 aa10.29□□□□□ -0.76
CLSTN3-203ENST00000534830 TBC1D3HP0C7X1 549 aa10.29□□□□□ -0.76
CLSTN3-203ENST00000534830 NUDT1P36639 197 aa10.29□□□□□ -0.76
CLSTN3-203ENST00000534830 CLCN6P51797 869 aa10.29□□□□□ -0.76
CLSTN3-203ENST00000534830 COPB1P53618 953 aaKnown RBP10.29□□□□□ -0.76
CLSTN3-203ENST00000534830 VAC14Q08AM6 782 aa10.29□□□□□ -0.76
CLSTN3-203ENST00000534830 CNTN1Q12860 1018 aa10.29□□□□□ -0.76
CLSTN3-203ENST00000534830 NFATC3Q12968 1075 aa10.29□□□□□ -0.76
CLSTN3-203ENST00000534830 NCAPHQ15003 741 aa10.29□□□□□ -0.76
CLSTN3-203ENST00000534830 CCDC14Q49A88 953 aa10.29□□□□□ -0.76
CLSTN3-203ENST00000534830 ACCSLQ4AC99 568 aa10.29□□□□□ -0.76
CLSTN3-203ENST00000534830 PIP5KL1Q5T9C9 394 aa10.29□□□□□ -0.76
CLSTN3-203ENST00000534830 MANEALQ5VSG8 457 aa10.29□□□□□ -0.76
CLSTN3-203ENST00000534830 FAM46CQ5VWP2 391 aa10.29□□□□□ -0.76
CLSTN3-203ENST00000534830 TBC1D3GQ6DHY5 549 aa10.29□□□□□ -0.76
CLSTN3-203ENST00000534830 TBC1D3CQ6IPX1 549 aa10.29□□□□□ -0.76
CLSTN3-203ENST00000534830 LRRC31Q6UY01 552 aa10.29□□□□□ -0.76
CLSTN3-203ENST00000534830 DSG4Q86SJ6 1040 aa10.29□□□□□ -0.76
CLSTN3-203ENST00000534830 FAM131BQ86XD5 332 aa10.29□□□□□ -0.76
CLSTN3-203ENST00000534830 TBC1D3Q8IZP1 549 aaPredicted RBP10.29□□□□□ -0.76
CLSTN3-203ENST00000534830 EMC1Q8N766 993 aa10.29□□□□□ -0.76
CLSTN3-203ENST00000534830 MFSD2AQ8NA29 543 aa10.29□□□□□ -0.76
CLSTN3-203ENST00000534830 DCAF4L2Q8NA75 395 aa10.29□□□□□ -0.76
CLSTN3-203ENST00000534830 MSANTD4Q8NCY6 345 aa10.29□□□□□ -0.76
CLSTN3-203ENST00000534830 TMIEQ8NEW7 156 aa10.29□□□□□ -0.76
CLSTN3-203ENST00000534830 SAP25Q8TEE9 199 aa10.29□□□□□ -0.76
CLSTN3-203ENST00000534830 KCNE4Q8WWG9 221 aa10.29□□□□□ -0.76
CLSTN3-203ENST00000534830 TSC1Q92574 1164 aa10.29□□□□□ -0.76
CLSTN3-203ENST00000534830 ERGIC2Q96RQ1 377 aa10.29□□□□□ -0.76
CLSTN3-203ENST00000534830 PCDHB18PQ96TA0 734 aa10.29□□□□□ -0.76
CLSTN3-203ENST00000534830 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.29□□□□□ -0.76
CLSTN3-203ENST00000534830 C2orf49Q9BVC5 232 aaPredicted RBP10.29□□□□□ -0.76
CLSTN3-203ENST00000534830 MUC3BQ9H195 1237 aa10.29□□□□□ -0.76
CLSTN3-203ENST00000534830 RETREG1Q9H6L5 497 aa10.29□□□□□ -0.76
CLSTN3-203ENST00000534830 ERVMER34-1Q9H9K5 563 aa10.29□□□□□ -0.76
CLSTN3-203ENST00000534830 NLRC4Q9NPP4 1024 aa10.29□□□□□ -0.76
CLSTN3-203ENST00000534830 METTL5Q9NRN9 209 aaKnown RBP10.29□□□□□ -0.76
CLSTN3-203ENST00000534830 NEU3Q9UQ49 428 aa10.29□□□□□ -0.76
CLSTN3-203ENST00000534830 TCRBV5S1A1TA0A578 114 aa10.28□□□□□ -0.76
CLSTN3-203ENST00000534830 FAM170AA1A519 330 aa10.28□□□□□ -0.76
CLSTN3-203ENST00000534830 LGALS16A8MUM7 142 aa10.28□□□□□ -0.76
CLSTN3-203ENST00000534830 C1QTNF3-AMACRE9PGA6 284 aa10.28□□□□□ -0.76
CLSTN3-203ENST00000534830 TLR4O00206 839 aa10.28□□□□□ -0.76
CLSTN3-203ENST00000534830 MPOP05164 745 aa10.28□□□□□ -0.76
CLSTN3-203ENST00000534830 RRM1P23921 792 aa10.28□□□□□ -0.76
CLSTN3-203ENST00000534830 OR1E1P30953 314 aa10.28□□□□□ -0.76
CLSTN3-203ENST00000534830 CHRNA3P32297 505 aa10.28□□□□□ -0.76
CLSTN3-203ENST00000534830 ANP32AP39687 249 aaKnown RBP10.28□□□□□ -0.76
CLSTN3-203ENST00000534830 PTPN9P43378 593 aa10.28□□□□□ -0.76
CLSTN3-203ENST00000534830 RXRGP48443 463 aa10.28□□□□□ -0.76
CLSTN3-203ENST00000534830 NXPH1P58417 271 aa10.28□□□□□ -0.76
CLSTN3-203ENST00000534830 ARF5P84085 180 aa10.28□□□□□ -0.76
CLSTN3-203ENST00000534830 INSM1Q01101 510 aaPredicted RBP10.28□□□□□ -0.76
CLSTN3-203ENST00000534830 SLC20A2Q08357 652 aa10.28□□□□□ -0.76
CLSTN3-203ENST00000534830 ILKQ13418 452 aa10.28□□□□□ -0.76
CLSTN3-203ENST00000534830 C15orf59Q2T9L4 293 aaPredicted RBP10.28□□□□□ -0.76
CLSTN3-203ENST00000534830 C6orf132Q5T0Z8 1188 aa10.28□□□□□ -0.76
CLSTN3-203ENST00000534830 FKBP15Q5T1M5 1219 aa10.28□□□□□ -0.76
CLSTN3-203ENST00000534830 KIAA1614Q5VZ46 1190 aa10.28□□□□□ -0.76
CLSTN3-203ENST00000534830 NAPEPLDQ6IQ20 393 aa10.28□□□□□ -0.76
CLSTN3-203ENST00000534830 TRIM72Q6ZMU5 477 aa10.28□□□□□ -0.76
CLSTN3-203ENST00000534830 STRADAQ7RTN6 431 aa10.28□□□□□ -0.76
CLSTN3-203ENST00000534830 KANSL1Q7Z3B3 1105 aa10.28□□□□□ -0.76
CLSTN3-203ENST00000534830 PRPF39Q86UA1 669 aaKnown RBP10.28□□□□□ -0.76
CLSTN3-203ENST00000534830 IQCHQ86VS3 1027 aa10.28□□□□□ -0.76
CLSTN3-203ENST00000534830 NLRP14Q86W24 1093 aa10.28□□□□□ -0.76
CLSTN3-203ENST00000534830 SPATS2Q86XZ4 545 aaKnown RBP10.28□□□□□ -0.76
CLSTN3-203ENST00000534830 DCBLD1Q8N8Z6 715 aa10.28□□□□□ -0.76
CLSTN3-203ENST00000534830 ATP11CQ8NB49 1132 aa10.28□□□□□ -0.76
CLSTN3-203ENST00000534830 OR7D4Q8NG98 312 aa10.28□□□□□ -0.76
CLSTN3-203ENST00000534830 JOSD2Q8TAC2 188 aa10.28□□□□□ -0.76
CLSTN3-203ENST00000534830 SLC30A5Q8TAD4 765 aa10.28□□□□□ -0.76
CLSTN3-203ENST00000534830 RXFP2Q8WXD0 754 aa10.28□□□□□ -0.76
CLSTN3-203ENST00000534830 VOPP1Q96AW1 172 aa10.28□□□□□ -0.76
CLSTN3-203ENST00000534830 ARRDC3Q96B67 414 aa10.28□□□□□ -0.76
CLSTN3-203ENST00000534830 SKA1Q96BD8 255 aa10.28□□□□□ -0.76
CLSTN3-203ENST00000534830 HIC2Q96JB3 615 aa10.28□□□□□ -0.76
CLSTN3-203ENST00000534830 SERAC1Q96JX3 654 aa10.28□□□□□ -0.76
CLSTN3-203ENST00000534830 ZNF578Q96N58 590 aaPredicted RBP10.28□□□□□ -0.76
CLSTN3-203ENST00000534830 ZYG11BQ9C0D3 744 aa10.28□□□□□ -0.76
CLSTN3-203ENST00000534830 OSBPL2Q9H1P3 480 aa10.28□□□□□ -0.76
CLSTN3-203ENST00000534830 PREBQ9HCU5 417 aa10.28□□□□□ -0.76
CLSTN3-203ENST00000534830 FAM207AQ9NSI2 230 aaPredicted RBP10.28□□□□□ -0.76
CLSTN3-203ENST00000534830 ANO10Q9NW15 660 aa10.28□□□□□ -0.76
CLSTN3-203ENST00000534830 AHCTF1Q8WYP5 2266 aa10.28□□□□□ -0.76
CLSTN3-203ENST00000534830 YKT6O15498 198 aa10.27□□□□□ -0.77
CLSTN3-203ENST00000534830 SRGAP2O75044 1071 aa10.27□□□□□ -0.77
CLSTN3-203ENST00000534830 GJB6O95452 261 aa10.27□□□□□ -0.77
CLSTN3-203ENST00000534830 CKMT2P17540 419 aa10.27□□□□□ -0.77
CLSTN3-203ENST00000534830 ADRA1BP35368 520 aa10.27□□□□□ -0.77
CLSTN3-203ENST00000534830 STAT1P42224 750 aa10.27□□□□□ -0.77
CLSTN3-203ENST00000534830 HDAC4P56524 1084 aa10.27□□□□□ -0.77
CLSTN3-203ENST00000534830 ATP11AP98196 1134 aa10.27□□□□□ -0.77
CLSTN3-203ENST00000534830 MYL5Q02045 173 aa10.27□□□□□ -0.77
CLSTN3-203ENST00000534830 GNA12Q03113 381 aa10.27□□□□□ -0.77
CLSTN3-203ENST00000534830 SYCP1Q15431 976 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms