RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 J3KR12 359 aa13.59□□□□□ -0.23
BEST1-208ENST00000534553 MYO1CO00159 1063 aa13.59□□□□□ -0.23
BEST1-208ENST00000534553 PAPSS2O95340 614 aaPredicted RBP13.59□□□□□ -0.23
BEST1-208ENST00000534553 EPOP01588 193 aa13.59□□□□□ -0.23
BEST1-208ENST00000534553 MPOP05164 745 aa13.59□□□□□ -0.23
BEST1-208ENST00000534553 CTSAP10619 480 aa13.59□□□□□ -0.23
BEST1-208ENST00000534553 NEFHP12036 1026 aa13.59□□□□□ -0.23
BEST1-208ENST00000534553 PFKLP17858 780 aa13.59□□□□□ -0.23
BEST1-208ENST00000534553 CES1P23141 567 aa13.59□□□□□ -0.23
BEST1-208ENST00000534553 DNAJB1P25685 340 aa13.59□□□□□ -0.23
BEST1-208ENST00000534553 CORO1AP31146 461 aaKnown RBP13.59□□□□□ -0.23
BEST1-208ENST00000534553 WNT3AP56704 352 aa13.59□□□□□ -0.23
BEST1-208ENST00000534553 GNA12Q03113 381 aa13.59□□□□□ -0.23
BEST1-208ENST00000534553 SLC10A7Q0GE19 358 aa13.59□□□□□ -0.23
BEST1-208ENST00000534553 CCDC15Q0P6D6 951 aa13.59□□□□□ -0.23
BEST1-208ENST00000534553 TWF1Q12792 350 aa13.59□□□□□ -0.23
BEST1-208ENST00000534553 ZNF235Q14590 738 aa13.59□□□□□ -0.23
BEST1-208ENST00000534553 ALG1LQ6GMV1 187 aa13.59□□□□□ -0.23
BEST1-208ENST00000534553 KIAA0930Q6ICG6 404 aaPredicted RBP13.59□□□□□ -0.23
BEST1-208ENST00000534553 FAM117BQ6P1L5 589 aa13.59□□□□□ -0.23
BEST1-208ENST00000534553 FAM47EQ6ZV65 393 aa13.59□□□□□ -0.23
BEST1-208ENST00000534553 DNAJB7Q7Z6W7 309 aaPredicted RBP13.59□□□□□ -0.23
BEST1-208ENST00000534553 STRA8Q7Z7C7 330 aa13.59□□□□□ -0.23
BEST1-208ENST00000534553 LMNTD2Q8IXW0 634 aa13.59□□□□□ -0.23
BEST1-208ENST00000534553 UNC5BQ8IZJ1 945 aa13.59□□□□□ -0.23
BEST1-208ENST00000534553 PEX13Q92968 403 aa13.59□□□□□ -0.23
BEST1-208ENST00000534553 TADA1Q96BN2 335 aa13.59□□□□□ -0.23
BEST1-208ENST00000534553 KLF16Q9BXK1 252 aaPredicted RBP13.59□□□□□ -0.23
BEST1-208ENST00000534553 ZBP1Q9H171 429 aa13.59□□□□□ -0.23
BEST1-208ENST00000534553 ATP13A1Q9HD20 1204 aa13.59□□□□□ -0.23
BEST1-208ENST00000534553 NT5MQ9NPB1 228 aa13.59□□□□□ -0.23
BEST1-208ENST00000534553 USH1CQ9Y6N9 552 aa13.59□□□□□ -0.23
BEST1-208ENST00000534553 NYNRINQ9P2P1 1898 aaKnown RBP13.58□□□□□ -0.24
BEST1-208ENST00000534553 TYW5A2RUC4 315 aaKnown RBP13.58□□□□□ -0.24
BEST1-208ENST00000534553 TPP1O14773 563 aa13.58□□□□□ -0.24
BEST1-208ENST00000534553 PMPCBO75439 489 aa13.58□□□□□ -0.24
BEST1-208ENST00000534553 GJB5O95377 273 aa13.58□□□□□ -0.24
BEST1-208ENST00000534553 ALDOAP04075 364 aaKnown RBP13.58□□□□□ -0.24
BEST1-208ENST00000534553 ITGB8P26012 769 aa13.58□□□□□ -0.24
BEST1-208ENST00000534553 TYK2P29597 1187 aa13.58□□□□□ -0.24
BEST1-208ENST00000534553 MAGEA12P43365 314 aa13.58□□□□□ -0.24
BEST1-208ENST00000534553 SERPINH1P50454 418 aaKnown RBP13.58□□□□□ -0.24
BEST1-208ENST00000534553 HTRA4P83105 476 aaPredicted RBP13.58□□□□□ -0.24
BEST1-208ENST00000534553 ITKQ08881 620 aa13.58□□□□□ -0.24
BEST1-208ENST00000534553 PPIGQ13427 754 aaKnown RBP eCLIP13.58□□□□□ -0.24
BEST1-208ENST00000534553 HSP90AA5PQ58FG0 334 aa13.58□□□□□ -0.24
BEST1-208ENST00000534553 KIAA0408Q6ZU52 694 aa13.58□□□□□ -0.24
BEST1-208ENST00000534553 CCDC149Q6ZUS6 474 aa13.58□□□□□ -0.24
BEST1-208ENST00000534553 DENND1CQ8IV53 801 aa13.58□□□□□ -0.24
BEST1-208ENST00000534553 FIBCD1Q8N539 461 aa13.58□□□□□ -0.24
BEST1-208ENST00000534553 CCDC63Q8NA47 563 aa13.58□□□□□ -0.24
BEST1-208ENST00000534553 CALML6Q8TD86 181 aa13.58□□□□□ -0.24
BEST1-208ENST00000534553 FAM167BQ9BTA0 163 aa13.58□□□□□ -0.24
BEST1-208ENST00000534553 SLC13A1Q9BZW2 595 aa13.58□□□□□ -0.24
BEST1-208ENST00000534553 PDFQ9HBH1 243 aa13.58□□□□□ -0.24
BEST1-208ENST00000534553 SEPT3Q9UH03 358 aa13.58□□□□□ -0.24
BEST1-208ENST00000534553 ZFP37Q9Y6Q3 630 aaPredicted RBP13.58□□□□□ -0.24
BEST1-208ENST00000534553 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.57□□□□□ -0.24
BEST1-208ENST00000534553 LILRB3O75022 631 aa13.57□□□□□ -0.24
BEST1-208ENST00000534553 SIN3BO75182 1162 aa13.57□□□□□ -0.24
BEST1-208ENST00000534553 DCTN3O75935 186 aa13.57□□□□□ -0.24
BEST1-208ENST00000534553 FGF18O76093 207 aa13.57□□□□□ -0.24
BEST1-208ENST00000534553 FSBPO95073 299 aa13.57□□□□□ -0.24
BEST1-208ENST00000534553 OLFM2O95897 454 aa13.57□□□□□ -0.24
BEST1-208ENST00000534553 HLA-DPA1P20036 260 aa13.57□□□□□ -0.24
BEST1-208ENST00000534553 SLC6A4P31645 630 aa13.57□□□□□ -0.24
BEST1-208ENST00000534553 ZNF177Q13360 481 aaPredicted RBP13.57□□□□□ -0.24
BEST1-208ENST00000534553 POU6F1Q14863 301 aa13.57□□□□□ -0.24
BEST1-208ENST00000534553 CCDC153Q494R4 210 aa13.57□□□□□ -0.24
BEST1-208ENST00000534553 CES3Q6UWW8 571 aa13.57□□□□□ -0.24
BEST1-208ENST00000534553 SPOCK2Q92563 424 aa13.57□□□□□ -0.24
BEST1-208ENST00000534553 TSSK1BQ9BXA7 367 aa13.57□□□□□ -0.24
BEST1-208ENST00000534553 RHOJQ9H4E5 214 aa13.57□□□□□ -0.24
BEST1-208ENST00000534553 SIRPGQ9P1W8 387 aa13.57□□□□□ -0.24
BEST1-208ENST00000534553 MID2Q9UJV3 735 aa13.57□□□□□ -0.24
BEST1-208ENST00000534553 TBC1D30Q9Y2I9 924 aa13.57□□□□□ -0.24
BEST1-208ENST00000534553 INSL6Q9Y581 213 aa13.57□□□□□ -0.24
BEST1-208ENST00000534553 PSAT1Q9Y617 370 aa13.57□□□□□ -0.24
BEST1-208ENST00000534553 TEX28O15482 410 aa13.57□□□□□ -0.24
BEST1-208ENST00000534553 KDELR3O43731 214 aa13.57□□□□□ -0.24
BEST1-208ENST00000534553 FGF1P05230 155 aa13.57□□□□□ -0.24
BEST1-208ENST00000534553 TPH1P17752 444 aa13.57□□□□□ -0.24
BEST1-208ENST00000534553 NMBRP28336 390 aa13.57□□□□□ -0.24
BEST1-208ENST00000534553 CD86P42081 329 aa13.57□□□□□ -0.24
BEST1-208ENST00000534553 SETDB1Q15047 1291 aa13.57□□□□□ -0.24
BEST1-208ENST00000534553 SPDYAQ5MJ70 313 aa13.57□□□□□ -0.24
BEST1-208ENST00000534553 CGB2Q6NT52 195 aa13.57□□□□□ -0.24
BEST1-208ENST00000534553 CDHR3Q6ZTQ4 885 aa13.57□□□□□ -0.24
BEST1-208ENST00000534553 RTL10Q7L3V2 364 aa13.57□□□□□ -0.24
BEST1-208ENST00000534553 CCDC91Q7Z6B0 441 aa13.57□□□□□ -0.24
BEST1-208ENST00000534553 PPM1EQ8WY54 764 aa13.57□□□□□ -0.24
BEST1-208ENST00000534553 CLP1Q92989 425 aaKnown RBP13.57□□□□□ -0.24
BEST1-208ENST00000534553 FEM1CQ96JP0 617 aa13.57□□□□□ -0.24
BEST1-208ENST00000534553 MCMBPQ9BTE3 642 aa13.57□□□□□ -0.24
BEST1-208ENST00000534553 TRIM55Q9BYV6 548 aa13.57□□□□□ -0.24
BEST1-208ENST00000534553 TREX1Q9NSU2 369 aa13.57□□□□□ -0.24
BEST1-208ENST00000534553 PRKAG2Q9UGJ0 569 aa13.57□□□□□ -0.24
BEST1-208ENST00000534553 ZNF510Q9Y2H8 683 aa13.57□□□□□ -0.24
BEST1-208ENST00000534553 ARIH1Q9Y4X5 557 aaPredicted RBP13.57□□□□□ -0.24
BEST1-208ENST00000534553 LOC285095A0A1B0GVY8 99 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms