RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 CROCCP3Q8IVE0 287 aa17.42■□□□□ 0.38
PHRF1-206ENST00000534320 FAM9CQ8IZT9 166 aa17.42■□□□□ 0.38
PHRF1-206ENST00000534320 STK32AQ8WU08 396 aa17.42■□□□□ 0.38
PHRF1-206ENST00000534320 MPP4Q96JB8 637 aa17.42■□□□□ 0.38
PHRF1-206ENST00000534320 ACOX2Q99424 681 aa17.42■□□□□ 0.38
PHRF1-206ENST00000534320 PHACTR1Q9C0D0 580 aa17.42■□□□□ 0.38
PHRF1-206ENST00000534320 ACTR8Q9H981 624 aa17.42■□□□□ 0.38
PHRF1-206ENST00000534320 FANCEQ9HB96 536 aa17.42■□□□□ 0.38
PHRF1-206ENST00000534320 FBXO6Q9NRD1 293 aaPredicted RBP17.42■□□□□ 0.38
PHRF1-206ENST00000534320 RWDD3Q9Y3V2 267 aa17.42■□□□□ 0.38
PHRF1-206ENST00000534320 PAGE1O75459 146 aa17.42■□□□□ 0.38
PHRF1-206ENST00000534320 SKIV2L2P42285 1042 aaKnown RBP17.42■□□□□ 0.38
PHRF1-206ENST00000534320 ARCQ7LC44 396 aa17.42■□□□□ 0.38
PHRF1-206ENST00000534320 BBS7Q8IWZ6 715 aa17.42■□□□□ 0.38
PHRF1-206ENST00000534320 ZNF398Q8TD17 642 aa17.42■□□□□ 0.38
PHRF1-206ENST00000534320 SLCO1B3Q9NPD5 702 aa17.42■□□□□ 0.38
PHRF1-206ENST00000534320 CYLDQ9NQC7 956 aa17.42■□□□□ 0.38
PHRF1-206ENST00000534320 NMRK1Q9NWW6 199 aa17.42■□□□□ 0.38
PHRF1-206ENST00000534320 LRCH1Q9Y2L9 728 aa17.42■□□□□ 0.38
PHRF1-206ENST00000534320 SNX13Q9Y5W8 968 aa17.42■□□□□ 0.38
PHRF1-206ENST00000534320 OR6C75A6NL08 312 aa17.42■□□□□ 0.38
PHRF1-206ENST00000534320 BAIAP3O94812 1187 aa17.42■□□□□ 0.38
PHRF1-206ENST00000534320 GUCA1CO95843 209 aa17.42■□□□□ 0.38
PHRF1-206ENST00000534320 CSH1P0DML2 217 aa17.42■□□□□ 0.38
PHRF1-206ENST00000534320 CSH2P0DML3 217 aa17.42■□□□□ 0.38
PHRF1-206ENST00000534320 IL12RB1P42701 662 aa17.42■□□□□ 0.38
PHRF1-206ENST00000534320 NOVP48745 357 aa17.42■□□□□ 0.38
PHRF1-206ENST00000534320 NAGLUP54802 743 aa17.42■□□□□ 0.38
PHRF1-206ENST00000534320 MSLNQ13421 630 aaPredicted RBP17.42■□□□□ 0.38
PHRF1-206ENST00000534320 ATP6AP1LQ52LC2 224 aa17.42■□□□□ 0.38
PHRF1-206ENST00000534320 ZC3H3Q8IXZ2 948 aaKnown RBP17.42■□□□□ 0.38
PHRF1-206ENST00000534320 SEMA3CQ99985 751 aa17.42■□□□□ 0.38
PHRF1-206ENST00000534320 TMA7Q9Y2S6 64 aaKnown RBP17.42■□□□□ 0.38
PHRF1-206ENST00000534320 BTN3A1O00481 513 aa17.42■□□□□ 0.38
PHRF1-206ENST00000534320 RAD51BO15315 384 aa17.42■□□□□ 0.38
PHRF1-206ENST00000534320 CCNT2O60583 730 aaKnown RBP17.42■□□□□ 0.38
PHRF1-206ENST00000534320 ASGR1P07306 291 aa17.42■□□□□ 0.38
PHRF1-206ENST00000534320 LTA4HP09960 611 aaKnown RBP17.42■□□□□ 0.38
PHRF1-206ENST00000534320 OCM2P0CE71 109 aa17.42■□□□□ 0.38
PHRF1-206ENST00000534320 OCMP0CE72 109 aaPredicted RBP17.42■□□□□ 0.38
PHRF1-206ENST00000534320 C16orf72Q14CZ0 275 aa17.42■□□□□ 0.38
PHRF1-206ENST00000534320 USP41Q3LFD5 358 aa17.42■□□□□ 0.38
PHRF1-206ENST00000534320 MFSD4BQ5TF39 518 aa17.42■□□□□ 0.38
PHRF1-206ENST00000534320 HNRNPABQ99729 332 aaKnown RBP17.42■□□□□ 0.38
PHRF1-206ENST00000534320 AGPSO00116 658 aa17.41■□□□□ 0.38
PHRF1-206ENST00000534320 RGS5O15539 181 aa17.41■□□□□ 0.38
PHRF1-206ENST00000534320 TPD52L2O43399 206 aaKnown RBP17.41■□□□□ 0.38
PHRF1-206ENST00000534320 MFSD11O43934 449 aa17.41■□□□□ 0.38
PHRF1-206ENST00000534320 TPSB2P20231 275 aa17.41■□□□□ 0.38
PHRF1-206ENST00000534320 CLCNKBP51801 687 aa17.41■□□□□ 0.38
PHRF1-206ENST00000534320 TPSAB1Q15661 275 aa17.41■□□□□ 0.38
PHRF1-206ENST00000534320 PACS1Q6VY07 963 aa17.41■□□□□ 0.38
PHRF1-206ENST00000534320 TMEM192Q8IY95 271 aa17.41■□□□□ 0.38
PHRF1-206ENST00000534320 WDR60Q8WVS4 1066 aa17.41■□□□□ 0.38
PHRF1-206ENST00000534320 RMND5AQ9H871 391 aa17.41■□□□□ 0.38
PHRF1-206ENST00000534320 MRPL17Q9NRX2 175 aaKnown RBP17.41■□□□□ 0.38
PHRF1-206ENST00000534320 BUD23O43709 281 aaKnown RBP17.41■□□□□ 0.38
PHRF1-206ENST00000534320 PBLDP30039 288 aaPredicted RBP17.41■□□□□ 0.38
PHRF1-206ENST00000534320 POU5F1Q01860 360 aaKnown RBP17.41■□□□□ 0.38
PHRF1-206ENST00000534320 SFSWAPQ12872 951 aaKnown RBP17.41■□□□□ 0.38
PHRF1-206ENST00000534320 FASTKQ14296 549 aaKnown RBP17.41■□□□□ 0.38
PHRF1-206ENST00000534320 DENND1CQ8IV53 801 aa17.41■□□□□ 0.38
PHRF1-206ENST00000534320 ELOVL6Q9H5J4 265 aa17.41■□□□□ 0.38
PHRF1-206ENST00000534320 POLG2Q9UHN1 485 aa17.41■□□□□ 0.38
PHRF1-206ENST00000534320 TSC22D2O75157 780 aa17.41■□□□□ 0.38
PHRF1-206ENST00000534320 UNC5CO95185 931 aa17.41■□□□□ 0.38
PHRF1-206ENST00000534320 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.41■□□□□ 0.38
PHRF1-206ENST00000534320 TAF5Q15542 800 aa17.41■□□□□ 0.38
PHRF1-206ENST00000534320 OASLQ15646 514 aaKnown RBP17.41■□□□□ 0.38
PHRF1-206ENST00000534320 CYP1B1Q16678 543 aa17.41■□□□□ 0.38
PHRF1-206ENST00000534320 FNBP1LQ5T0N5 605 aa17.41■□□□□ 0.38
PHRF1-206ENST00000534320 RNASEH2BQ5TBB1 312 aaKnown RBP17.41■□□□□ 0.38
PHRF1-206ENST00000534320 CPNE8Q86YQ8 564 aa17.41■□□□□ 0.38
PHRF1-206ENST00000534320 RSPH1Q8WYR4 309 aa17.41■□□□□ 0.38
PHRF1-206ENST00000534320 QKIQ96PU8 341 aaKnown RBP eCLIP17.41■□□□□ 0.38
PHRF1-206ENST00000534320 KLHL4Q9C0H6 718 aa17.41■□□□□ 0.38
PHRF1-206ENST00000534320 PAIP1Q9H074 479 aaKnown RBP17.41■□□□□ 0.38
PHRF1-206ENST00000534320 SYNDIG1LA6NDD5 238 aa17.41■□□□□ 0.38
PHRF1-206ENST00000534320 KCNA10Q16322 511 aa17.41■□□□□ 0.38
PHRF1-206ENST00000534320 SNX32Q86XE0 403 aa17.41■□□□□ 0.38
PHRF1-206ENST00000534320 OR56A4Q8NGH8 313 aa17.41■□□□□ 0.38
PHRF1-206ENST00000534320 TEPSINQ96N21 525 aa17.41■□□□□ 0.38
PHRF1-206ENST00000534320 ASB2Q96Q27 587 aa17.41■□□□□ 0.38
PHRF1-206ENST00000534320 C2orf49Q9BVC5 232 aaPredicted RBP17.41■□□□□ 0.38
PHRF1-206ENST00000534320 TMEM109Q9BVC6 243 aa17.41■□□□□ 0.38
PHRF1-206ENST00000534320 GRHL1Q9NZI5 618 aa17.41■□□□□ 0.38
PHRF1-206ENST00000534320 FAM50BQ9Y247 325 aa17.41■□□□□ 0.38
PHRF1-206ENST00000534320 C15orf41Q9Y2V0 281 aa17.41■□□□□ 0.38
PHRF1-206ENST00000534320 SOAT1P35610 550 aa17.4■□□□□ 0.38
PHRF1-206ENST00000534320 CLCN5P51795 746 aa17.4■□□□□ 0.38
PHRF1-206ENST00000534320 MAXP61244 160 aa17.4■□□□□ 0.38
PHRF1-206ENST00000534320 ELF3P78545 371 aaPredicted RBP17.4■□□□□ 0.38
PHRF1-206ENST00000534320 ATP1A4Q13733 1029 aa17.4■□□□□ 0.38
PHRF1-206ENST00000534320 PPM1LQ5SGD2 360 aa17.4■□□□□ 0.38
PHRF1-206ENST00000534320 GPR152Q8TDT2 470 aa17.4■□□□□ 0.38
PHRF1-206ENST00000534320 MMADHCQ9H3L0 296 aaPredicted RBP17.4■□□□□ 0.38
PHRF1-206ENST00000534320 TLR5O60602 858 aa17.4■□□□□ 0.38
PHRF1-206ENST00000534320 CCDC166P0CW27 439 aa17.4■□□□□ 0.38
PHRF1-206ENST00000534320 CCDC81Q6ZN84 652 aa17.4■□□□□ 0.38
PHRF1-206ENST00000534320 SLC44A1Q8WWI5 657 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms