RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	CLGN	O14967	610 aa		4.98	□□□□□ -1.61
ATM-223	ENST00000533979	VILL	O15195	856 aa		4.98	□□□□□ -1.61
ATM-223	ENST00000533979	CA12	O43570	354 aa		4.98	□□□□□ -1.61
ATM-223	ENST00000533979	CCNT2	O60583	730 aa	Known RBP	4.98	□□□□□ -1.61
ATM-223	ENST00000533979	CNOT3	O75175	753 aa	Known RBP	4.98	□□□□□ -1.61
ATM-223	ENST00000533979	BEST1	O76090	585 aa		4.98	□□□□□ -1.61
ATM-223	ENST00000533979	WDR47	O94967	919 aa		4.98	□□□□□ -1.61
ATM-223	ENST00000533979	CPA1	P15085	419 aa		4.98	□□□□□ -1.61
ATM-223	ENST00000533979	TACR3	P29371	465 aa		4.98	□□□□□ -1.61
ATM-223	ENST00000533979	HADHA	P40939	763 aa		4.98	□□□□□ -1.61
ATM-223	ENST00000533979	TNNT3	P45378	269 aa	Predicted RBP	4.98	□□□□□ -1.61
ATM-223	ENST00000533979	MMP14	P50281	582 aa		4.98	□□□□□ -1.61
ATM-223	ENST00000533979	RPS13	P62277	151 aa	Known RBP	4.98	□□□□□ -1.61
ATM-223	ENST00000533979	ID2	Q02363	134 aa		4.98	□□□□□ -1.61
ATM-223	ENST00000533979	EPS8	Q12929	822 aa		4.98	□□□□□ -1.61
ATM-223	ENST00000533979	STK4	Q13043	487 aa		4.98	□□□□□ -1.61
ATM-223	ENST00000533979	GPS1	Q13098	491 aa		4.98	□□□□□ -1.61
ATM-223	ENST00000533979	PPP2R5C	Q13362	524 aa		4.98	□□□□□ -1.61
ATM-223	ENST00000533979	STIM1	Q13586	685 aa		4.98	□□□□□ -1.61
ATM-223	ENST00000533979	CC2D1B	Q5T0F9	858 aa	Known RBP	4.98	□□□□□ -1.61
ATM-223	ENST00000533979	DGAT2L7P	Q6IED9	249 aa		4.98	□□□□□ -1.61
ATM-223	ENST00000533979	SHC4	Q6S5L8	630 aa		4.98	□□□□□ -1.61
ATM-223	ENST00000533979	KLHL24	Q6TFL4	600 aa		4.98	□□□□□ -1.61
ATM-223	ENST00000533979	FAM47E	Q6ZV65	393 aa		4.98	□□□□□ -1.61
ATM-223	ENST00000533979	METTL6	Q8TCB7	284 aa		4.98	□□□□□ -1.61
ATM-223	ENST00000533979	WDR60	Q8WVS4	1066 aa		4.98	□□□□□ -1.61
ATM-223	ENST00000533979	STAM	Q92783	540 aa		4.98	□□□□□ -1.61
ATM-223	ENST00000533979	KTI12	Q96EK9	354 aa	Predicted RBP	4.98	□□□□□ -1.61
ATM-223	ENST00000533979	PRR11	Q96HE9	360 aa	Predicted RBP	4.98	□□□□□ -1.61
ATM-223	ENST00000533979	PHF7	Q9BWX1	381 aa	Predicted RBP	4.98	□□□□□ -1.61
ATM-223	ENST00000533979	SEZ6L	Q9BYH1	1024 aa		4.98	□□□□□ -1.61
ATM-223	ENST00000533979	EDEM3	Q9BZQ6	932 aa		4.98	□□□□□ -1.61
ATM-223	ENST00000533979	NUAK2	Q9H093	628 aa		4.98	□□□□□ -1.61
ATM-223	ENST00000533979	SLC25A18	Q9H1K4	315 aa		4.98	□□□□□ -1.61
ATM-223	ENST00000533979	IL21R	Q9HBE5	538 aa		4.98	□□□□□ -1.61
ATM-223	ENST00000533979	ZDHHC7	Q9NXF8	308 aa		4.98	□□□□□ -1.61
ATM-223	ENST00000533979	MTMR4	Q9NYA4	1195 aa		4.98	□□□□□ -1.61
ATM-223	ENST00000533979	ZMYM2	Q9UBW7	1377 aa		4.98	□□□□□ -1.61
ATM-223	ENST00000533979	ADAMTS12	P58397	1594 aa		4.98	□□□□□ -1.61
ATM-223	ENST00000533979	FHAD1	B1AJZ9	1412 aa		4.97	□□□□□ -1.61
ATM-223	ENST00000533979	PTPRK	Q15262	1439 aa		4.97	□□□□□ -1.61
ATM-223	ENST00000533979	SHROOM2	Q13796	1616 aa		4.97	□□□□□ -1.61
ATM-223	ENST00000533979	PNMA6E	A0A0J9YXQ4	647 aa		4.97	□□□□□ -1.61
ATM-223	ENST00000533979	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	4.97	□□□□□ -1.61
ATM-223	ENST00000533979	PTGES3L	E9PB15	166 aa		4.97	□□□□□ -1.61
ATM-223	ENST00000533979	PRAMEF2	O60811	474 aa		4.97	□□□□□ -1.61
ATM-223	ENST00000533979	USP12	O75317	370 aa		4.97	□□□□□ -1.61
ATM-223	ENST00000533979	TAF5L	O75529	589 aa		4.97	□□□□□ -1.61
ATM-223	ENST00000533979	RPP40	O75818	363 aa	Known RBP	4.97	□□□□□ -1.61
ATM-223	ENST00000533979	MBP	P02686	304 aa	Predicted RBP	4.97	□□□□□ -1.61
ATM-223	ENST00000533979	PTMA	P06454	111 aa	Known RBP	4.97	□□□□□ -1.61
ATM-223	ENST00000533979	CYP21A2	P08686	494 aa		4.97	□□□□□ -1.61
ATM-223	ENST00000533979	UBL4A	P11441	157 aa		4.97	□□□□□ -1.61
ATM-223	ENST00000533979	PRF1	P14222	555 aa		4.97	□□□□□ -1.61
ATM-223	ENST00000533979	PSMA3	P25788	255 aa		4.97	□□□□□ -1.61
ATM-223	ENST00000533979	DUSP1	P28562	367 aa		4.97	□□□□□ -1.61
ATM-223	ENST00000533979	JAK3	P52333	1124 aa		4.97	□□□□□ -1.61
ATM-223	ENST00000533979	FOXG1	P55316	489 aa	Predicted RBP	4.97	□□□□□ -1.61
ATM-223	ENST00000533979	RPS3A	P61247	264 aa	Known RBP	4.97	□□□□□ -1.61
ATM-223	ENST00000533979	CFHR1	Q03591	330 aa		4.97	□□□□□ -1.61
ATM-223	ENST00000533979	ZNF91	Q05481	1191 aa		4.97	□□□□□ -1.61
ATM-223	ENST00000533979	LRMP	Q12912	555 aa		4.97	□□□□□ -1.61
ATM-223	ENST00000533979	PDCL	Q13371	301 aa		4.97	□□□□□ -1.61
ATM-223	ENST00000533979	AASDH	Q4L235	1098 aa	Predicted RBP	4.97	□□□□□ -1.61
ATM-223	ENST00000533979	ZNF484	Q5JVG2	852 aa		4.97	□□□□□ -1.61
ATM-223	ENST00000533979	ZNF772	Q68DY9	489 aa	Predicted RBP	4.97	□□□□□ -1.61
ATM-223	ENST00000533979	GPR139	Q6DWJ6	353 aa		4.97	□□□□□ -1.61
ATM-223	ENST00000533979	ABLIM2	Q6H8Q1	611 aa		4.97	□□□□□ -1.61
ATM-223	ENST00000533979	MFSD6	Q6ZSS7	791 aa		4.97	□□□□□ -1.61
ATM-223	ENST00000533979	RASGRP2	Q7LDG7	609 aa		4.97	□□□□□ -1.61
ATM-223	ENST00000533979	IRF2BP2	Q7Z5L9	587 aa		4.97	□□□□□ -1.61
ATM-223	ENST00000533979	IQCA1	Q86XH1	822 aa		4.97	□□□□□ -1.61
ATM-223	ENST00000533979	ARL10	Q8N8L6	244 aa		4.97	□□□□□ -1.61
ATM-223	ENST00000533979	SH3KBP1	Q96B97	665 aa		4.97	□□□□□ -1.61
ATM-223	ENST00000533979	VCPIP1	Q96JH7	1222 aa		4.97	□□□□□ -1.61
ATM-223	ENST00000533979	GRPEL1	Q9HAV7	217 aa		4.97	□□□□□ -1.61
ATM-223	ENST00000533979	TMEM184C	Q9NVA4	438 aa		4.97	□□□□□ -1.61
ATM-223	ENST00000533979	CHORDC1	Q9UHD1	332 aa	Predicted RBP	4.97	□□□□□ -1.61
ATM-223	ENST00000533979	TTC3	P53804	2025 aa		4.97	□□□□□ -1.61
ATM-223	ENST00000533979	LY6G6E	A0A0G2JKS1	128 aa		4.96	□□□□□ -1.62
ATM-223	ENST00000533979	C17orf113	A0A1B0GUU1	675 aa		4.96	□□□□□ -1.62
ATM-223	ENST00000533979	MYMK	A6NI61	221 aa		4.96	□□□□□ -1.62
ATM-223	ENST00000533979	PI4K2B	G5E9Z4	385 aa		4.96	□□□□□ -1.62
ATM-223	ENST00000533979	CBFA2T3	O75081	653 aa		4.96	□□□□□ -1.62
ATM-223	ENST00000533979	TBCA	O75347	108 aa	Known RBP	4.96	□□□□□ -1.62
ATM-223	ENST00000533979	MMP8	P22894	467 aa		4.96	□□□□□ -1.62
ATM-223	ENST00000533979	THBS4	P35443	961 aa		4.96	□□□□□ -1.62
ATM-223	ENST00000533979	PSMB10	P40306	273 aa		4.96	□□□□□ -1.62
ATM-223	ENST00000533979	PBX1	P40424	430 aa		4.96	□□□□□ -1.62
ATM-223	ENST00000533979	PIK3CA	P42336	1068 aa		4.96	□□□□□ -1.62
ATM-223	ENST00000533979	DPP6	P42658	865 aa		4.96	□□□□□ -1.62
ATM-223	ENST00000533979	HARS2	P49590	506 aa	Known RBP	4.96	□□□□□ -1.62
ATM-223	ENST00000533979	RARS	P54136	660 aa	Known RBP	4.96	□□□□□ -1.62
ATM-223	ENST00000533979	SRSF1	Q07955	248 aa	Known RBP eCLIP	4.96	□□□□□ -1.62
ATM-223	ENST00000533979	PTP4A2	Q12974	167 aa		4.96	□□□□□ -1.62
ATM-223	ENST00000533979	DCTN2	Q13561	401 aa	Known RBP	4.96	□□□□□ -1.62
ATM-223	ENST00000533979	TMEM266	Q2M3C6	531 aa		4.96	□□□□□ -1.62
ATM-223	ENST00000533979	LIPM	Q5VYY2	423 aa		4.96	□□□□□ -1.62
ATM-223	ENST00000533979	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	4.96	□□□□□ -1.62
ATM-223	ENST00000533979	P3H2	Q8IVL5	708 aa		4.96	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms