RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 TASP1Q9H6P5 420 aa12.14□□□□□ -0.47
ATM-222ENST00000533733 TRPC7Q9HCX4 862 aa12.14□□□□□ -0.47
ATM-222ENST00000533733 TMLHEQ9NVH6 421 aa12.14□□□□□ -0.47
ATM-222ENST00000533733 PNPOQ9NVS9 261 aa12.14□□□□□ -0.47
ATM-222ENST00000533733 OSER1Q9NX31 292 aa12.14□□□□□ -0.47
ATM-222ENST00000533733 CACNG4Q9UBN1 327 aa12.14□□□□□ -0.47
ATM-222ENST00000533733 BCAP29Q9UHQ4 241 aa12.14□□□□□ -0.47
ATM-222ENST00000533733 IPO11Q9UI26 975 aaKnown RBP12.14□□□□□ -0.47
ATM-222ENST00000533733 SLC39A10Q9ULF5 831 aa12.14□□□□□ -0.47
ATM-222ENST00000533733 E9PAM4 449 aa12.13□□□□□ -0.47
ATM-222ENST00000533733 SYN3O14994 580 aa12.13□□□□□ -0.47
ATM-222ENST00000533733 HDAC3O15379 428 aa12.13□□□□□ -0.47
ATM-222ENST00000533733 MAP3K7O43318 606 aa12.13□□□□□ -0.47
ATM-222ENST00000533733 CA12O43570 354 aa12.13□□□□□ -0.47
ATM-222ENST00000533733 KIF1CO43896 1103 aaKnown RBP12.13□□□□□ -0.47
ATM-222ENST00000533733 MGEA5O60502 916 aa12.13□□□□□ -0.47
ATM-222ENST00000533733 ASGR1P07306 291 aa12.13□□□□□ -0.47
ATM-222ENST00000533733 RHOQP17081 205 aa12.13□□□□□ -0.47
ATM-222ENST00000533733 HOXB8P17481 243 aaPredicted RBP12.13□□□□□ -0.47
ATM-222ENST00000533733 CD151P48509 253 aa12.13□□□□□ -0.47
ATM-222ENST00000533733 TUBP50607 506 aa12.13□□□□□ -0.47
ATM-222ENST00000533733 RPL14P50914 215 aaKnown RBP12.13□□□□□ -0.47
ATM-222ENST00000533733 UBAP2LQ14157 1087 aaKnown RBP12.13□□□□□ -0.47
ATM-222ENST00000533733 GRM3Q14832 879 aa12.13□□□□□ -0.47
ATM-222ENST00000533733 C1orf146Q5VVC0 180 aa12.13□□□□□ -0.47
ATM-222ENST00000533733 IRGCQ6NXR0 463 aa12.13□□□□□ -0.47
ATM-222ENST00000533733 RANBP10Q6VN20 620 aa12.13□□□□□ -0.47
ATM-222ENST00000533733 ACAD11Q709F0 780 aa12.13□□□□□ -0.47
ATM-222ENST00000533733 NUP93Q8N1F7 819 aa12.13□□□□□ -0.47
ATM-222ENST00000533733 AFAP1L2Q8N4X5 818 aa12.13□□□□□ -0.47
ATM-222ENST00000533733 ATP6V0D2Q8N8Y2 350 aa12.13□□□□□ -0.47
ATM-222ENST00000533733 TDRD5Q8NAT2 981 aaKnown RBP12.13□□□□□ -0.47
ATM-222ENST00000533733 C2CD4AQ8NCU7 369 aaPredicted RBP12.13□□□□□ -0.47
ATM-222ENST00000533733 WDR60Q8WVS4 1066 aa12.13□□□□□ -0.47
ATM-222ENST00000533733 PEX13Q92968 403 aa12.13□□□□□ -0.47
ATM-222ENST00000533733 FAR2Q96K12 515 aa12.13□□□□□ -0.47
ATM-222ENST00000533733 SIK2Q9H0K1 926 aa12.13□□□□□ -0.47
ATM-222ENST00000533733 COG4Q9H9E3 785 aa12.13□□□□□ -0.47
ATM-222ENST00000533733 TCF7L2Q9NQB0 619 aa12.13□□□□□ -0.47
ATM-222ENST00000533733 RGS18Q9NS28 235 aa12.13□□□□□ -0.47
ATM-222ENST00000533733 TREX1Q9NSU2 369 aa12.13□□□□□ -0.47
ATM-222ENST00000533733 SLC7A8Q9UHI5 535 aa12.13□□□□□ -0.47
ATM-222ENST00000533733 NOD1Q9Y239 953 aa12.13□□□□□ -0.47
ATM-222ENST00000533733 UTRNP46939 3433 aa12.13□□□□□ -0.47
ATM-222ENST00000533733 MATN2O00339 956 aa12.12□□□□□ -0.47
ATM-222ENST00000533733 TBX10O75333 385 aa12.12□□□□□ -0.47
ATM-222ENST00000533733 KRT36O76013 467 aa12.12□□□□□ -0.47
ATM-222ENST00000533733 ALDH1A1P00352 501 aa12.12□□□□□ -0.47
ATM-222ENST00000533733 PGK1P00558 417 aa12.12□□□□□ -0.47
ATM-222ENST00000533733 THRAP10827 490 aa12.12□□□□□ -0.47
ATM-222ENST00000533733 IBSPP21815 317 aaPredicted RBP12.12□□□□□ -0.47
ATM-222ENST00000533733 SLC26A3P40879 764 aa12.12□□□□□ -0.47
ATM-222ENST00000533733 CPA2P48052 419 aa12.12□□□□□ -0.47
ATM-222ENST00000533733 ARCN1P48444 511 aaKnown RBP12.12□□□□□ -0.47
ATM-222ENST00000533733 CLCN5P51795 746 aa12.12□□□□□ -0.47
ATM-222ENST00000533733 DNAJB13P59910 316 aa12.12□□□□□ -0.47
ATM-222ENST00000533733 XIAPP98170 497 aa12.12□□□□□ -0.47
ATM-222ENST00000533733 SATB1Q01826 763 aa12.12□□□□□ -0.47
ATM-222ENST00000533733 KLC1Q07866 573 aa12.12□□□□□ -0.47
ATM-222ENST00000533733 SMARCB1Q12824 385 aa12.12□□□□□ -0.47
ATM-222ENST00000533733 CRHR2Q13324 411 aa12.12□□□□□ -0.47
ATM-222ENST00000533733 OLIG2Q13516 323 aa12.12□□□□□ -0.47
ATM-222ENST00000533733 BTG3Q14201 252 aaPredicted RBP12.12□□□□□ -0.47
ATM-222ENST00000533733 HERC3Q15034 1050 aa12.12□□□□□ -0.47
ATM-222ENST00000533733 GSTA3Q16772 222 aa12.12□□□□□ -0.47
ATM-222ENST00000533733 SEL1L3Q68CR1 1132 aa12.12□□□□□ -0.47
ATM-222ENST00000533733 DENND5AQ6IQ26 1287 aa12.12□□□□□ -0.47
ATM-222ENST00000533733 LRRC8EQ6NSJ5 796 aa12.12□□□□□ -0.47
ATM-222ENST00000533733 RIPOR1Q6ZS17 1223 aa12.12□□□□□ -0.47
ATM-222ENST00000533733 OTOP3Q7RTS5 596 aa12.12□□□□□ -0.47
ATM-222ENST00000533733 PIWIL4Q7Z3Z4 852 aaKnown RBP12.12□□□□□ -0.47
ATM-222ENST00000533733 MAVSQ7Z434 540 aa12.12□□□□□ -0.47
ATM-222ENST00000533733 LRRTM3Q86VH5 581 aa12.12□□□□□ -0.47
ATM-222ENST00000533733 IPMKQ8NFU5 416 aa12.12□□□□□ -0.47
ATM-222ENST00000533733 KCNV2Q8TDN2 545 aa12.12□□□□□ -0.47
ATM-222ENST00000533733 TRIB2Q92519 343 aa12.12□□□□□ -0.47
ATM-222ENST00000533733 CASP10Q92851 521 aa12.12□□□□□ -0.47
ATM-222ENST00000533733 MIEF2Q96C03 454 aa12.12□□□□□ -0.47
ATM-222ENST00000533733 SLC39A13Q96H72 371 aa12.12□□□□□ -0.47
ATM-222ENST00000533733 SERPINI1Q99574 410 aa12.12□□□□□ -0.47
ATM-222ENST00000533733 MRPL57Q9BQC6 102 aaKnown RBP12.12□□□□□ -0.47
ATM-222ENST00000533733 FICDQ9BVA6 458 aa12.12□□□□□ -0.47
ATM-222ENST00000533733 GATA5Q9BWX5 397 aaPredicted RBP12.12□□□□□ -0.47
ATM-222ENST00000533733 OXCT2Q9BYC2 517 aaPredicted RBP12.12□□□□□ -0.47
ATM-222ENST00000533733 RHOBTB2Q9BYZ6 727 aa12.12□□□□□ -0.47
ATM-222ENST00000533733 MRPL46Q9H2W6 279 aaKnown RBP12.12□□□□□ -0.47
ATM-222ENST00000533733 RBM22Q9NW64 420 aaKnown RBP eCLIP12.12□□□□□ -0.47
ATM-222ENST00000533733 TMEM248Q9NWD8 314 aa12.12□□□□□ -0.47
ATM-222ENST00000533733 NMRK1Q9NWW6 199 aa12.12□□□□□ -0.47
ATM-222ENST00000533733 CLIC5Q9NZA1 410 aa12.12□□□□□ -0.47
ATM-222ENST00000533733 IL1RAPL1Q9NZN1 696 aa12.12□□□□□ -0.47
ATM-222ENST00000533733 HACD3Q9P035 362 aa12.12□□□□□ -0.47
ATM-222ENST00000533733 CORO1CQ9ULV4 474 aaPredicted RBP12.12□□□□□ -0.47
ATM-222ENST00000533733 PRPF19Q9UMS4 504 aaKnown RBP12.12□□□□□ -0.47
ATM-222ENST00000533733 SNX10Q9Y5X0 201 aa12.12□□□□□ -0.47
ATM-222ENST00000533733 FAM95CA0A1B0GW59 222 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 TRPC5OSA6NMA1 111 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 RTN3O95197 1032 aaPredicted RBP12.11□□□□□ -0.47
ATM-222ENST00000533733 AHSGP02765 367 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 SLC35E2BP0CK96 405 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms