RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 LDLRP01130 860 aa17.76■□□□□ 0.43
PHRF1-205ENST00000533464 LRPAP1P30533 357 aa17.76■□□□□ 0.43
PHRF1-205ENST00000533464 UBE3AQ05086 875 aa17.76■□□□□ 0.43
PHRF1-205ENST00000533464 ACOX1Q15067 660 aa17.76■□□□□ 0.43
PHRF1-205ENST00000533464 PTPRNQ16849 979 aa17.76■□□□□ 0.43
PHRF1-205ENST00000533464 MFSD5Q6N075 450 aa17.76■□□□□ 0.43
PHRF1-205ENST00000533464 MRPL17Q9NRX2 175 aaKnown RBP17.76■□□□□ 0.43
PHRF1-205ENST00000533464 AJAP1Q9UKB5 411 aaPredicted RBP17.76■□□□□ 0.43
PHRF1-205ENST00000533464 HDAC3O15379 428 aa17.75■□□□□ 0.43
PHRF1-205ENST00000533464 PAGE1O75459 146 aa17.75■□□□□ 0.43
PHRF1-205ENST00000533464 ABCB1P08183 1280 aaPredicted RBP17.75■□□□□ 0.43
PHRF1-205ENST00000533464 CD48P09326 243 aa17.75■□□□□ 0.43
PHRF1-205ENST00000533464 PTP4A2Q12974 167 aa17.75■□□□□ 0.43
PHRF1-205ENST00000533464 OSCP1Q8WVF1 389 aa17.75■□□□□ 0.43
PHRF1-205ENST00000533464 DTNBP1Q96EV8 351 aa17.75■□□□□ 0.43
PHRF1-205ENST00000533464 ZNF558Q96NG5 402 aa17.75■□□□□ 0.43
PHRF1-205ENST00000533464 FAM126AQ9BYI3 521 aaPredicted RBP17.75■□□□□ 0.43
PHRF1-205ENST00000533464 LIMD1Q9UGP4 676 aa17.75■□□□□ 0.43
PHRF1-205ENST00000533464 NT5C1B-RDH14C9J2C7 533 aa17.75■□□□□ 0.43
PHRF1-205ENST00000533464 ZBTB14O43829 449 aa17.75■□□□□ 0.43
PHRF1-205ENST00000533464 ENTPD5O75356 428 aa17.75■□□□□ 0.43
PHRF1-205ENST00000533464 TYMPP19971 482 aa17.75■□□□□ 0.43
PHRF1-205ENST00000533464 RRM2P31350 389 aa17.75■□□□□ 0.43
PHRF1-205ENST00000533464 EML3Q32P44 896 aa17.75■□□□□ 0.43
PHRF1-205ENST00000533464 BRMS1LQ5PSV4 323 aa17.75■□□□□ 0.43
PHRF1-205ENST00000533464 CERCAMQ5T4B2 595 aa17.75■□□□□ 0.43
PHRF1-205ENST00000533464 NMD3Q96D46 503 aaKnown RBP17.75■□□□□ 0.43
PHRF1-205ENST00000533464 KLHL5Q96PQ7 755 aa17.75■□□□□ 0.43
PHRF1-205ENST00000533464 ZCCHC2Q9C0B9 1178 aaKnown RBP17.75■□□□□ 0.43
PHRF1-205ENST00000533464 SPG21Q9NZD8 308 aa17.75■□□□□ 0.43
PHRF1-205ENST00000533464 PACSIN3Q9UKS6 424 aa17.75■□□□□ 0.43
PHRF1-205ENST00000533464 AKAP12Q02952 1782 aa17.75■□□□□ 0.43
PHRF1-205ENST00000533464 BIRC5O15392 142 aa17.75■□□□□ 0.43
PHRF1-205ENST00000533464 SH3BGRLO75368 114 aa17.75■□□□□ 0.43
PHRF1-205ENST00000533464 IFNA14P01570 189 aa17.75■□□□□ 0.43
PHRF1-205ENST00000533464 CSH1P0DML2 217 aa17.75■□□□□ 0.43
PHRF1-205ENST00000533464 CSH2P0DML3 217 aa17.75■□□□□ 0.43
PHRF1-205ENST00000533464 TSPAN8P19075 237 aa17.75■□□□□ 0.43
PHRF1-205ENST00000533464 GABRB2P47870 512 aa17.75■□□□□ 0.43
PHRF1-205ENST00000533464 AIF1P55008 147 aa17.75■□□□□ 0.43
PHRF1-205ENST00000533464 SPIRE1Q08AE8 756 aa17.75■□□□□ 0.43
PHRF1-205ENST00000533464 HSPA14Q0VDF9 509 aa17.75■□□□□ 0.43
PHRF1-205ENST00000533464 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.75■□□□□ 0.43
PHRF1-205ENST00000533464 SH3GL2Q99962 352 aa17.75■□□□□ 0.43
PHRF1-205ENST00000533464 BPIFA1Q9NP55 256 aa17.75■□□□□ 0.43
PHRF1-205ENST00000533464 COQ4Q9Y3A0 265 aa17.75■□□□□ 0.43
PHRF1-205ENST00000533464 TNPO3Q9Y5L0 923 aaKnown RBP17.75■□□□□ 0.43
PHRF1-205ENST00000533464 DGKAP23743 735 aa17.75■□□□□ 0.43
PHRF1-205ENST00000533464 ZNF280AP59817 542 aaPredicted RBP17.75■□□□□ 0.43
PHRF1-205ENST00000533464 FASTKD3Q14CZ7 662 aaKnown RBP17.75■□□□□ 0.43
PHRF1-205ENST00000533464 POTEHQ6S545 545 aa17.75■□□□□ 0.43
PHRF1-205ENST00000533464 USP45Q70EL2 814 aa17.75■□□□□ 0.43
PHRF1-205ENST00000533464 NECAB2Q7Z6G3 386 aa17.75■□□□□ 0.43
PHRF1-205ENST00000533464 C10orf107Q8IVU9 208 aa17.75■□□□□ 0.43
PHRF1-205ENST00000533464 HDAC10Q969S8 669 aa17.75■□□□□ 0.43
PHRF1-205ENST00000533464 ZFYVE19Q96K21 471 aa17.75■□□□□ 0.43
PHRF1-205ENST00000533464 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.75■□□□□ 0.432e-6■■□□□ 13.6
PHRF1-205ENST00000533464 CLUHO75153 1309 aa17.75■□□□□ 0.43
PHRF1-205ENST00000533464 MSI1O43347 362 aaKnown RBP17.75■□□□□ 0.43
PHRF1-205ENST00000533464 LYPLA1O75608 230 aaPredicted RBP17.75■□□□□ 0.43
PHRF1-205ENST00000533464 ALDH9A1P49189 494 aa17.75■□□□□ 0.43
PHRF1-205ENST00000533464 ASTE1Q2TB18 679 aaPredicted RBP17.75■□□□□ 0.43
PHRF1-205ENST00000533464 CACUL1Q86Y37 369 aa17.75■□□□□ 0.43
PHRF1-205ENST00000533464 SLC44A1Q8WWI5 657 aa17.75■□□□□ 0.43
PHRF1-205ENST00000533464 ZNF184Q99676 751 aaPredicted RBP17.75■□□□□ 0.43
PHRF1-205ENST00000533464 MRPL57Q9BQC6 102 aaKnown RBP17.75■□□□□ 0.43
PHRF1-205ENST00000533464 MAF1Q9H063 256 aa17.75■□□□□ 0.43
PHRF1-205ENST00000533464 PCDHA2Q9Y5H9 948 aa17.75■□□□□ 0.43
PHRF1-205ENST00000533464 PDZK1P1A8MUH7 402 aa17.74■□□□□ 0.43
PHRF1-205ENST00000533464 PEX11AO75192 247 aa17.74■□□□□ 0.43
PHRF1-205ENST00000533464 PARNO95453 639 aaKnown RBP17.74■□□□□ 0.43
PHRF1-205ENST00000533464 SLC26A9Q7LBE3 791 aa17.74■□□□□ 0.43
PHRF1-205ENST00000533464 TRIM69Q86WT6 500 aa17.74■□□□□ 0.43
PHRF1-205ENST00000533464 OR52K2Q8NGK3 314 aa17.74■□□□□ 0.43
PHRF1-205ENST00000533464 ZDHHC6Q9H6R6 413 aa17.74■□□□□ 0.43
PHRF1-205ENST00000533464 RGS14O43566 566 aa17.74■□□□□ 0.43
PHRF1-205ENST00000533464 NEK3P51956 506 aa17.74■□□□□ 0.43
PHRF1-205ENST00000533464 ALDH6A1Q02252 535 aaKnown RBP17.74■□□□□ 0.43
PHRF1-205ENST00000533464 CDK18Q07002 472 aa17.74■□□□□ 0.43
PHRF1-205ENST00000533464 UBAP2LQ14157 1087 aaKnown RBP17.74■□□□□ 0.43
PHRF1-205ENST00000533464 KLQ9UEF7 1012 aa17.74■□□□□ 0.43
PHRF1-205ENST00000533464 RAP2CQ9Y3L5 183 aa17.74■□□□□ 0.43
PHRF1-205ENST00000533464 CYP2A6P11509 494 aaPredicted RBP17.74■□□□□ 0.43
PHRF1-205ENST00000533464 SLC16A1P53985 500 aa17.74■□□□□ 0.43
PHRF1-205ENST00000533464 TEX44Q53QW1 395 aa17.74■□□□□ 0.43
PHRF1-205ENST00000533464 ACBD5Q5T8D3 534 aaPredicted RBP17.74■□□□□ 0.43
PHRF1-205ENST00000533464 STK32CQ86UX6 486 aa17.74■□□□□ 0.43
PHRF1-205ENST00000533464 SPPL2AQ8TCT8 520 aa17.74■□□□□ 0.43
PHRF1-205ENST00000533464 CAB39LQ9H9S4 337 aa17.74■□□□□ 0.43
PHRF1-205ENST00000533464 ATRNL1Q5VV63 1379 aa17.74■□□□□ 0.43
PHRF1-205ENST00000533464 CLOCKO15516 846 aa17.74■□□□□ 0.43
PHRF1-205ENST00000533464 MFSD11O43934 449 aa17.74■□□□□ 0.43
PHRF1-205ENST00000533464 XYLBO75191 536 aa17.74■□□□□ 0.43
PHRF1-205ENST00000533464 COX4I1P13073 169 aa17.74■□□□□ 0.43
PHRF1-205ENST00000533464 EPHA3P29320 983 aa17.74■□□□□ 0.43
PHRF1-205ENST00000533464 ANKRD23Q86SG2 305 aa17.74■□□□□ 0.43
PHRF1-205ENST00000533464 CAMKK2Q96RR4 588 aa17.74■□□□□ 0.43
PHRF1-205ENST00000533464 SPACA6W5XKT8 324 aa17.74■□□□□ 0.43
PHRF1-205ENST00000533464 LMO7Q8WWI1 1683 aa17.73■□□□□ 0.43
PHRF1-205ENST00000533464 PIK3CGP48736 1102 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms