RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 MT-CO3P00414 261 aa23.3■■□□□ 1.32
PKP3-210ENST00000533249 MMEP08473 750 aa23.3■■□□□ 1.32
PKP3-210ENST00000533249 ATP11AP98196 1134 aa23.3■■□□□ 1.32
PKP3-210ENST00000533249 GNA12Q03113 381 aa23.3■■□□□ 1.32
PKP3-210ENST00000533249 NAA35Q5VZE5 725 aa23.3■■□□□ 1.32
PKP3-210ENST00000533249 ZNF783Q6ZMS7 281 aa23.3■■□□□ 1.32
PKP3-210ENST00000533249 Q6ZSR6 202 aa23.3■■□□□ 1.32
PKP3-210ENST00000533249 ABI3BPQ7Z7G0 1075 aa23.3■■□□□ 1.32
PKP3-210ENST00000533249 CACTIN-AS1Q8N1I8 211 aa23.3■■□□□ 1.32
PKP3-210ENST00000533249 PCDH20Q8N6Y1 951 aaKnown RBP23.3■■□□□ 1.32
PKP3-210ENST00000533249 BAP1Q92560 729 aa23.3■■□□□ 1.32
PKP3-210ENST00000533249 HEPHQ9BQS7 1158 aa23.3■■□□□ 1.32
PKP3-210ENST00000533249 CEP44Q9C0F1 390 aa23.3■■□□□ 1.32
PKP3-210ENST00000533249 DNAJC28Q9NX36 388 aa23.3■■□□□ 1.32
PKP3-210ENST00000533249 FCF1Q9Y324 198 aaKnown RBP23.3■■□□□ 1.32
PKP3-210ENST00000533249 ACTL7AQ9Y615 435 aa23.3■■□□□ 1.32
PKP3-210ENST00000533249 LSM8O95777 96 aaKnown RBP23.29■■□□□ 1.32
PKP3-210ENST00000533249 MYF5P13349 255 aa23.29■■□□□ 1.32
PKP3-210ENST00000533249 ADRB3P13945 408 aa23.29■■□□□ 1.32
PKP3-210ENST00000533249 L1CAMP32004 1257 aa23.29■■□□□ 1.32
PKP3-210ENST00000533249 CCNHP51946 323 aaPredicted RBP23.29■■□□□ 1.32
PKP3-210ENST00000533249 ARF5P84085 180 aa23.29■■□□□ 1.32
PKP3-210ENST00000533249 SLC20A2Q08357 652 aa23.29■■□□□ 1.32
PKP3-210ENST00000533249 CARD16Q5EG05 197 aa23.29■■□□□ 1.32
PKP3-210ENST00000533249 BNIPLQ7Z465 357 aa23.29■■□□□ 1.32
PKP3-210ENST00000533249 EMC1Q8N766 993 aa23.29■■□□□ 1.32
PKP3-210ENST00000533249 BMFQ96LC9 184 aa23.29■■□□□ 1.32
PKP3-210ENST00000533249 NAA15Q9BXJ9 866 aaKnown RBP23.29■■□□□ 1.32
PKP3-210ENST00000533249 SLC17A9Q9BYT1 436 aa23.29■■□□□ 1.32
PKP3-210ENST00000533249 TM6SF2Q9BZW4 377 aa23.29■■□□□ 1.32
PKP3-210ENST00000533249 ZDHHC6Q9H6R6 413 aa23.29■■□□□ 1.32
PKP3-210ENST00000533249 METTL5Q9NRN9 209 aaKnown RBP23.29■■□□□ 1.32
PKP3-210ENST00000533249 PAK4O96013 591 aaPredicted RBP23.28■■□□□ 1.32
PKP3-210ENST00000533249 GIMD1P0DJR0 217 aa23.28■■□□□ 1.32
PKP3-210ENST00000533249 ALPPL2P10696 532 aa23.28■■□□□ 1.32
PKP3-210ENST00000533249 UCHL3P15374 230 aa23.28■■□□□ 1.32
PKP3-210ENST00000533249 ITGB7P26010 798 aa23.28■■□□□ 1.32
PKP3-210ENST00000533249 RPS21P63220 83 aaKnown RBP23.28■■□□□ 1.32
PKP3-210ENST00000533249 NOMO3P69849 1222 aa23.28■■□□□ 1.32
PKP3-210ENST00000533249 FGL2Q14314 439 aa23.28■■□□□ 1.32
PKP3-210ENST00000533249 CDO1Q16878 200 aa23.28■■□□□ 1.32
PKP3-210ENST00000533249 RAB6CQ53S08 254 aa23.28■■□□□ 1.32
PKP3-210ENST00000533249 KIAA1161Q6NSJ0 714 aa23.28■■□□□ 1.32
PKP3-210ENST00000533249 SNIP1Q8TAD8 396 aaKnown RBP23.28■■□□□ 1.32
PKP3-210ENST00000533249 FGF11Q92914 225 aa23.28■■□□□ 1.32
PKP3-210ENST00000533249 FEM1CQ96JP0 617 aa23.28■■□□□ 1.32
PKP3-210ENST00000533249 RAB6CQ9H0N0 254 aa23.28■■□□□ 1.32
PKP3-210ENST00000533249 PCDHB1Q9Y5F3 818 aa23.28■■□□□ 1.32
PKP3-210ENST00000533249 RAI2Q9Y5P3 530 aa23.28■■□□□ 1.32
PKP3-210ENST00000533249 FADS3Q9Y5Q0 445 aa23.28■■□□□ 1.32
PKP3-210ENST00000533249 SHROOM3Q8TF72 1996 aa23.28■■□□□ 1.32
PKP3-210ENST00000533249 POM121BA6NF01 834 aa23.27■■□□□ 1.32
PKP3-210ENST00000533249 F8VZ95 297 aa23.27■■□□□ 1.32
PKP3-210ENST00000533249 RAD51BO15315 384 aa23.27■■□□□ 1.32
PKP3-210ENST00000533249 CKMT1AP12532 417 aa23.27■■□□□ 1.32
PKP3-210ENST00000533249 ACVRL1P37023 503 aa23.27■■□□□ 1.32
PKP3-210ENST00000533249 PARS2Q7L3T8 475 aaKnown RBP23.27■■□□□ 1.32
PKP3-210ENST00000533249 PHLDB2Q86SQ0 1253 aa23.27■■□□□ 1.32
PKP3-210ENST00000533249 RYBPQ8N488 228 aaPredicted RBP23.27■■□□□ 1.32
PKP3-210ENST00000533249 EPS8L1Q8TE68 723 aa23.27■■□□□ 1.32
PKP3-210ENST00000533249 IFT43Q96FT9 208 aa23.27■■□□□ 1.32
PKP3-210ENST00000533249 APOLD1Q96LR9 279 aa23.27■■□□□ 1.32
PKP3-210ENST00000533249 UBL7Q96S82 380 aaPredicted RBP23.27■■□□□ 1.32
PKP3-210ENST00000533249 PRORYQ9H606 182 aa23.27■■□□□ 1.32
PKP3-210ENST00000533249 SAMSN1Q9NSI8 373 aaKnown RBP23.27■■□□□ 1.32
PKP3-210ENST00000533249 NLGN3Q9NZ94 848 aa23.27■■□□□ 1.32
PKP3-210ENST00000533249 HS3ST3A1Q9Y663 406 aa23.27■■□□□ 1.32
PKP3-210ENST00000533249 NEMP2A6NFY4 417 aa23.26■■□□□ 1.31
PKP3-210ENST00000533249 OPA1O60313 960 aa23.26■■□□□ 1.31
PKP3-210ENST00000533249 NEBLO76041 1014 aa23.26■■□□□ 1.31
PKP3-210ENST00000533249 ERCC5P28715 1186 aaPredicted RBP23.26■■□□□ 1.31
PKP3-210ENST00000533249 GKP32189 559 aa23.26■■□□□ 1.31
PKP3-210ENST00000533249 ACTN2P35609 894 aa23.26■■□□□ 1.31
PKP3-210ENST00000533249 HNRNPKP61978 463 aaKnown RBP eCLIP23.26■■□□□ 1.311e-8■■■■□ 22.4
PKP3-210ENST00000533249 CCDC173Q0VFZ6 552 aa23.26■■□□□ 1.31
PKP3-210ENST00000533249 RWDD4Q6NW29 188 aaKnown RBP23.26■■□□□ 1.31
PKP3-210ENST00000533249 KYAT3Q6YP21 454 aaKnown RBP23.26■■□□□ 1.31
PKP3-210ENST00000533249 DCP2Q8IU60 420 aaKnown RBP23.26■■□□□ 1.31
PKP3-210ENST00000533249 OR6K2Q8NGY2 324 aa23.26■■□□□ 1.31
PKP3-210ENST00000533249 FAM174AQ8TBP5 190 aa23.26■■□□□ 1.31
PKP3-210ENST00000533249 SLC20A1Q8WUM9 679 aa23.26■■□□□ 1.31
PKP3-210ENST00000533249 STK33Q9BYT3 514 aa23.26■■□□□ 1.31
PKP3-210ENST00000533249 NDFIP2Q9NV92 336 aa23.26■■□□□ 1.31
PKP3-210ENST00000533249 TMEM63CQ9P1W3 806 aa23.26■■□□□ 1.31
PKP3-210ENST00000533249 HECAQ9UBI9 543 aaPredicted RBP23.26■■□□□ 1.31
PKP3-210ENST00000533249 PPARGC1AQ9UBK2 798 aaKnown RBP23.26■■□□□ 1.31
PKP3-210ENST00000533249 DACH1Q9UI36 760 aa23.26■■□□□ 1.31
PKP3-210ENST00000533249 PTPRQQ9UMZ3 2332 aa23.26■■□□□ 1.31
PKP3-210ENST00000533249 CD160O95971 181 aa23.25■■□□□ 1.31
PKP3-210ENST00000533249 FZD2Q14332 565 aa23.25■■□□□ 1.31
PKP3-210ENST00000533249 C15orf59Q2T9L4 293 aaPredicted RBP23.25■■□□□ 1.31
PKP3-210ENST00000533249 TBC1D25Q3MII6 688 aa23.25■■□□□ 1.31
PKP3-210ENST00000533249 ARCQ7LC44 396 aa23.25■■□□□ 1.31
PKP3-210ENST00000533249 FCRL3Q96P31 734 aaPredicted RBP23.25■■□□□ 1.31
PKP3-210ENST00000533249 ANP32EQ9BTT0 268 aa23.25■■□□□ 1.31
PKP3-210ENST00000533249 OSBPL2Q9H1P3 480 aa23.25■■□□□ 1.31
PKP3-210ENST00000533249 TAB2Q9NYJ8 693 aa23.25■■□□□ 1.31
PKP3-210ENST00000533249 OR12D3Q9UGF7 316 aa23.25■■□□□ 1.31
PKP3-210ENST00000533249 IPO11Q9UI26 975 aaKnown RBP23.25■■□□□ 1.31
PKP3-210ENST00000533249 DNAI1Q9UI46 699 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms