RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 ZNF670Q9BS34 389 aa12.39□□□□□ -0.43
BDNF-218ENST00000533246 POMKQ9H5K3 350 aa12.39□□□□□ -0.43
BDNF-218ENST00000533246 RIC8BQ9NVN3 520 aa12.39□□□□□ -0.43
BDNF-218ENST00000533246 TRNAU1APQ9NX07 287 aaKnown RBP12.39□□□□□ -0.43
BDNF-218ENST00000533246 ZMYM5Q9UJ78 669 aa12.39□□□□□ -0.43
BDNF-218ENST00000533246 IPPQ9Y573 584 aa12.39□□□□□ -0.43
BDNF-218ENST00000533246 MYO7AQ13402 2215 aa12.39□□□□□ -0.43
BDNF-218ENST00000533246 MAGEB16A2A368 324 aa12.39□□□□□ -0.43
BDNF-218ENST00000533246 MSCO60682 206 aa12.39□□□□□ -0.43
BDNF-218ENST00000533246 TMEM63AO94886 807 aa12.39□□□□□ -0.43
BDNF-218ENST00000533246 SEMA3DO95025 777 aa12.39□□□□□ -0.43
BDNF-218ENST00000533246 GRM5P41594 1212 aa12.39□□□□□ -0.43
BDNF-218ENST00000533246 CEP78Q5JTW2 689 aa12.39□□□□□ -0.43
BDNF-218ENST00000533246 PCSK9Q8NBP7 692 aaKnown RBP12.39□□□□□ -0.43
BDNF-218ENST00000533246 FAM105AQ9NUU6 356 aa12.39□□□□□ -0.43
BDNF-218ENST00000533246 TRPV2Q9Y5S1 764 aa12.39□□□□□ -0.43
BDNF-218ENST00000533246 ACTL7BQ9Y614 415 aa12.39□□□□□ -0.43
BDNF-218ENST00000533246 TCRBV7S3A2A0A539 114 aa12.39□□□□□ -0.43
BDNF-218ENST00000533246 ADCY6O43306 1168 aa12.39□□□□□ -0.43
BDNF-218ENST00000533246 MFSD11O43934 449 aa12.39□□□□□ -0.43
BDNF-218ENST00000533246 ABHD2P08910 425 aa12.39□□□□□ -0.43
BDNF-218ENST00000533246 TPBGLP0DKB5 382 aa12.39□□□□□ -0.43
BDNF-218ENST00000533246 DARSP14868 501 aaKnown RBP12.39□□□□□ -0.43
BDNF-218ENST00000533246 IL4RP24394 825 aa12.39□□□□□ -0.43
BDNF-218ENST00000533246 MZF1P28698 734 aaPredicted RBP12.39□□□□□ -0.43
BDNF-218ENST00000533246 PBLDP30039 288 aaPredicted RBP12.39□□□□□ -0.43
BDNF-218ENST00000533246 NPY2RP49146 381 aa12.39□□□□□ -0.43
BDNF-218ENST00000533246 ST8SIA6P61647 398 aa12.39□□□□□ -0.43
BDNF-218ENST00000533246 SPANXN3Q5MJ09 141 aa12.39□□□□□ -0.43
BDNF-218ENST00000533246 RNASEH2BQ5TBB1 312 aaKnown RBP12.39□□□□□ -0.43
BDNF-218ENST00000533246 KYAT3Q6YP21 454 aaKnown RBP12.39□□□□□ -0.43
BDNF-218ENST00000533246 CFAP52Q8N1V2 620 aa12.39□□□□□ -0.43
BDNF-218ENST00000533246 CCDC185Q8N715 623 aa12.39□□□□□ -0.43
BDNF-218ENST00000533246 SPATA22Q8NHS9 363 aa12.39□□□□□ -0.43
BDNF-218ENST00000533246 ZFYVE19Q96K21 471 aa12.39□□□□□ -0.43
BDNF-218ENST00000533246 TBL1YQ9BQ87 522 aa12.39□□□□□ -0.43
BDNF-218ENST00000533246 LHX5Q9H2C1 402 aa12.39□□□□□ -0.43
BDNF-218ENST00000533246 TXNRD2Q9NNW7 524 aa12.39□□□□□ -0.43
BDNF-218ENST00000533246 BPIFA1Q9NP55 256 aa12.39□□□□□ -0.43
BDNF-218ENST00000533246 SEMA4BQ9NPR2 832 aaPredicted RBP12.39□□□□□ -0.43
BDNF-218ENST00000533246 SLC17A6Q9P2U8 582 aa12.39□□□□□ -0.43
BDNF-218ENST00000533246 RBPJLQ9UBG7 517 aa12.39□□□□□ -0.43
BDNF-218ENST00000533246 C2P06681 752 aa12.38□□□□□ -0.43
BDNF-218ENST00000533246 GSTT2P0CG29 244 aa12.38□□□□□ -0.43
BDNF-218ENST00000533246 GSTT2BP0CG30 244 aa12.38□□□□□ -0.43
BDNF-218ENST00000533246 FOXN2P32314 431 aa12.38□□□□□ -0.43
BDNF-218ENST00000533246 INPP1P49441 399 aa12.38□□□□□ -0.43
BDNF-218ENST00000533246 CCL23P55773 120 aa12.38□□□□□ -0.43
BDNF-218ENST00000533246 OCA2Q04671 838 aa12.38□□□□□ -0.43
BDNF-218ENST00000533246 FASTKQ14296 549 aaKnown RBP12.38□□□□□ -0.43
BDNF-218ENST00000533246 DUSP28Q4G0W2 176 aa12.38□□□□□ -0.43
BDNF-218ENST00000533246 FAM35AQ86V20 835 aa12.38□□□□□ -0.43
BDNF-218ENST00000533246 SEMA3CQ99985 751 aa12.38□□□□□ -0.43
BDNF-218ENST00000533246 CCSER2Q9H7U1 834 aa12.38□□□□□ -0.43
BDNF-218ENST00000533246 ACTR8Q9H981 624 aa12.38□□□□□ -0.43
BDNF-218ENST00000533246 C12orf4Q9NQ89 552 aa12.38□□□□□ -0.43
BDNF-218ENST00000533246 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.38□□□□□ -0.43
BDNF-218ENST00000533246 MYBPHLA2RUH7 354 aa12.38□□□□□ -0.43
BDNF-218ENST00000533246 BTN3A1O00481 513 aa12.38□□□□□ -0.43
BDNF-218ENST00000533246 PPEF2O14830 753 aa12.38□□□□□ -0.43
BDNF-218ENST00000533246 UGT1A9O60656 530 aa12.38□□□□□ -0.43
BDNF-218ENST00000533246 TPPPO94811 219 aa12.38□□□□□ -0.43
BDNF-218ENST00000533246 CDH3P22223 829 aa12.38□□□□□ -0.43
BDNF-218ENST00000533246 GRIA4P48058 902 aa12.38□□□□□ -0.43
BDNF-218ENST00000533246 SREBF2Q12772 1141 aa12.38□□□□□ -0.43
BDNF-218ENST00000533246 TUBA3EQ6PEY2 450 aa12.38□□□□□ -0.43
BDNF-218ENST00000533246 CCDC81Q6ZN84 652 aa12.38□□□□□ -0.43
BDNF-218ENST00000533246 TPGS1Q6ZTW0 290 aa12.38□□□□□ -0.43
BDNF-218ENST00000533246 CLNKQ7Z7G1 428 aa12.38□□□□□ -0.43
BDNF-218ENST00000533246 TTC7BQ86TV6 843 aa12.38□□□□□ -0.43
BDNF-218ENST00000533246 UNC5BQ8IZJ1 945 aa12.38□□□□□ -0.43
BDNF-218ENST00000533246 PCDH19Q8TAB3 1148 aa12.38□□□□□ -0.43
BDNF-218ENST00000533246 GDPD5Q8WTR4 605 aa12.38□□□□□ -0.43
BDNF-218ENST00000533246 SERPINB11Q96P15 392 aa12.38□□□□□ -0.43
BDNF-218ENST00000533246 UGT1A7Q9HAW7 530 aa12.38□□□□□ -0.43
BDNF-218ENST00000533246 UGT1A10Q9HAW8 530 aa12.38□□□□□ -0.43
BDNF-218ENST00000533246 UGT1A8Q9HAW9 530 aa12.38□□□□□ -0.43
BDNF-218ENST00000533246 TLR8Q9NR97 1041 aaKnown RBP12.38□□□□□ -0.43
BDNF-218ENST00000533246 KCNK4Q9NYG8 393 aa12.38□□□□□ -0.43
BDNF-218ENST00000533246 XPR1Q9UBH6 696 aa12.38□□□□□ -0.43
BDNF-218ENST00000533246 FBXO5Q9UKT4 447 aa12.38□□□□□ -0.43
BDNF-218ENST00000533246 CCNT2O60583 730 aaKnown RBP12.38□□□□□ -0.43
BDNF-218ENST00000533246 TSPAN1O60635 241 aa12.38□□□□□ -0.43
BDNF-218ENST00000533246 PEX11AO75192 247 aa12.38□□□□□ -0.43
BDNF-218ENST00000533246 WDR4P57081 412 aaKnown RBP12.38□□□□□ -0.43
BDNF-218ENST00000533246 PWP1Q13610 501 aa12.38□□□□□ -0.43
BDNF-218ENST00000533246 WASHC2DQ5SRD0 308 aa12.38□□□□□ -0.43
BDNF-218ENST00000533246 PACS1Q6VY07 963 aa12.38□□□□□ -0.43
BDNF-218ENST00000533246 TAGAPQ8N103 731 aa12.38□□□□□ -0.43
BDNF-218ENST00000533246 FBXO39Q8N4B4 442 aa12.38□□□□□ -0.43
BDNF-218ENST00000533246 MRPS31Q92665 395 aaKnown RBP12.38□□□□□ -0.43
BDNF-218ENST00000533246 B3GALT6Q96L58 329 aa12.38□□□□□ -0.43
BDNF-218ENST00000533246 TRIM39Q9HCM9 518 aa12.38□□□□□ -0.43
BDNF-218ENST00000533246 SNX15Q9NRS6 342 aa12.38□□□□□ -0.43
BDNF-218ENST00000533246 PTPRJQ12913 1337 aa12.38□□□□□ -0.43
BDNF-218ENST00000533246 HACD1B0YJ81 288 aa12.37□□□□□ -0.43
BDNF-218ENST00000533246 MRASO14807 208 aa12.37□□□□□ -0.43
BDNF-218ENST00000533246 CRTAMO95727 393 aa12.37□□□□□ -0.43
BDNF-218ENST00000533246 ENO2P09104 434 aaPredicted RBP12.37□□□□□ -0.43
BDNF-218ENST00000533246 AXLP30530 894 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms