RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 CCDC38Q502W7 563 aa18.82■□□□□ 0.6
SMPD1-208ENST00000533123 IL31Q6EBC2 164 aa18.82■□□□□ 0.6
SMPD1-208ENST00000533123 CAND1Q86VP6 1230 aaKnown RBP18.82■□□□□ 0.6
SMPD1-208ENST00000533123 YAF2Q8IY57 180 aa18.82■□□□□ 0.6
SMPD1-208ENST00000533123 NAT16Q8N8M0 369 aa18.82■□□□□ 0.6
SMPD1-208ENST00000533123 ROPN1BQ9BZX4 212 aaPredicted RBP18.82■□□□□ 0.6
SMPD1-208ENST00000533123 PHACTR1Q9C0D0 580 aa18.82■□□□□ 0.6
SMPD1-208ENST00000533123 MAGEH1Q9H213 219 aa18.82■□□□□ 0.6
SMPD1-208ENST00000533123 ROPN1Q9HAT0 212 aaPredicted RBP18.82■□□□□ 0.6
SMPD1-208ENST00000533123 RRP15Q9Y3B9 282 aaKnown RBP18.82■□□□□ 0.6
SMPD1-208ENST00000533123 FOXO6A8MYZ6 492 aa18.82■□□□□ 0.6
SMPD1-208ENST00000533123 C2CD4DB7Z1M9 353 aa18.82■□□□□ 0.6
SMPD1-208ENST00000533123 STK10O94804 968 aaKnown RBP18.82■□□□□ 0.6
SMPD1-208ENST00000533123 ELK3P41970 407 aa18.82■□□□□ 0.6
SMPD1-208ENST00000533123 SERINC3Q13530 473 aa18.82■□□□□ 0.6
SMPD1-208ENST00000533123 RNF43Q68DV7 783 aa18.82■□□□□ 0.6
SMPD1-208ENST00000533123 C4orf22Q6V702 233 aa18.82■□□□□ 0.6
SMPD1-208ENST00000533123 ZNF534Q76KX8 674 aa18.82■□□□□ 0.6
SMPD1-208ENST00000533123 CCDC117Q8IWD4 279 aaPredicted RBP18.82■□□□□ 0.6
SMPD1-208ENST00000533123 C10orf67Q8IYJ2 551 aa18.82■□□□□ 0.6
SMPD1-208ENST00000533123 BRD8Q9H0E9 1235 aa18.82■□□□□ 0.6
SMPD1-208ENST00000533123 E7EVH7 732 aa18.81■□□□□ 0.6
SMPD1-208ENST00000533123 EIF3HO15372 352 aaKnown RBP eCLIP18.81■□□□□ 0.6
SMPD1-208ENST00000533123 ECI2O75521 394 aa18.81■□□□□ 0.6
SMPD1-208ENST00000533123 CCNCP24863 283 aa18.81■□□□□ 0.6
SMPD1-208ENST00000533123 PTPN3P26045 913 aa18.81■□□□□ 0.6
SMPD1-208ENST00000533123 CSKP41240 450 aa18.81■□□□□ 0.6
SMPD1-208ENST00000533123 GRIA1P42261 906 aa18.81■□□□□ 0.6
SMPD1-208ENST00000533123 SEMA5AQ13591 1074 aa18.81■□□□□ 0.6
SMPD1-208ENST00000533123 MTSS1LQ765P7 747 aa18.81■□□□□ 0.6
SMPD1-208ENST00000533123 FIBINQ8TAL6 211 aa18.81■□□□□ 0.6
SMPD1-208ENST00000533123 ATP2A3Q93084 1043 aa18.81■□□□□ 0.6
SMPD1-208ENST00000533123 TSGA13Q96PP4 275 aa18.81■□□□□ 0.6
SMPD1-208ENST00000533123 FEM1AQ9BSK4 669 aa18.81■□□□□ 0.6
SMPD1-208ENST00000533123 HPS4Q9NQG7 708 aa18.81■□□□□ 0.6
SMPD1-208ENST00000533123 MARK1Q9P0L2 795 aa18.81■□□□□ 0.6
SMPD1-208ENST00000533123 OPHN1O60890 802 aa18.81■□□□□ 0.6
SMPD1-208ENST00000533123 PIAS1O75925 651 aa18.81■□□□□ 0.6
SMPD1-208ENST00000533123 NFATC1O95644 943 aa18.81■□□□□ 0.6
SMPD1-208ENST00000533123 ADH5P11766 374 aa18.81■□□□□ 0.6
SMPD1-208ENST00000533123 GLDCP23378 1020 aa18.81■□□□□ 0.6
SMPD1-208ENST00000533123 PSMB4P28070 264 aa18.81■□□□□ 0.6
SMPD1-208ENST00000533123 GDI1P31150 447 aa18.81■□□□□ 0.6
SMPD1-208ENST00000533123 CD70P32970 193 aa18.81■□□□□ 0.6
SMPD1-208ENST00000533123 SKOR1P84550 965 aa18.81■□□□□ 0.6
SMPD1-208ENST00000533123 LMAN2Q12907 356 aa18.81■□□□□ 0.6
SMPD1-208ENST00000533123 PPP1R21Q6ZMI0 780 aa18.81■□□□□ 0.6
SMPD1-208ENST00000533123 LRRC49Q8IUZ0 686 aa18.81■□□□□ 0.6
SMPD1-208ENST00000533123 TTC8Q8TAM2 541 aa18.81■□□□□ 0.6
SMPD1-208ENST00000533123 ECT2Q9H8V3 914 aa18.81■□□□□ 0.6
SMPD1-208ENST00000533123 ATP13A1Q9HD20 1204 aa18.81■□□□□ 0.6
SMPD1-208ENST00000533123 GTSE1Q9NYZ3 720 aa18.81■□□□□ 0.6
SMPD1-208ENST00000533123 EXOC1LA0A1B0GW35 172 aa18.8■□□□□ 0.6
SMPD1-208ENST00000533123 ADH1CP00326 375 aa18.8■□□□□ 0.6
SMPD1-208ENST00000533123 GCAP28676 217 aa18.8■□□□□ 0.6
SMPD1-208ENST00000533123 HLA-FP30511 346 aa18.8■□□□□ 0.6
SMPD1-208ENST00000533123 TFF2Q03403 129 aa18.8■□□□□ 0.6
SMPD1-208ENST00000533123 ZBTB17Q13105 803 aa18.8■□□□□ 0.6
SMPD1-208ENST00000533123 HTR4Q13639 388 aa18.8■□□□□ 0.6
SMPD1-208ENST00000533123 STAT4Q14765 748 aa18.8■□□□□ 0.6
SMPD1-208ENST00000533123 EFTUD2Q15029 972 aaKnown RBP eCLIP18.8■□□□□ 0.6
SMPD1-208ENST00000533123 PDGFRLQ15198 375 aa18.8■□□□□ 0.6
SMPD1-208ENST00000533123 TNFAIP8L3Q5GJ75 292 aa18.8■□□□□ 0.6
SMPD1-208ENST00000533123 ASTLQ6HA08 431 aaPredicted RBP18.8■□□□□ 0.6
SMPD1-208ENST00000533123 CROCCP2Q86T23 111 aa18.8■□□□□ 0.6
SMPD1-208ENST00000533123 CYP4X1Q8N118 509 aa18.8■□□□□ 0.6
SMPD1-208ENST00000533123 ATP11CQ8NB49 1132 aa18.8■□□□□ 0.6
SMPD1-208ENST00000533123 TRMT61BQ9BVS5 477 aaKnown RBP18.8■□□□□ 0.6
SMPD1-208ENST00000533123 SP110Q9HB58 689 aa18.8■□□□□ 0.6
SMPD1-208ENST00000533123 ABCB8Q9NUT2 735 aa18.8■□□□□ 0.6
SMPD1-208ENST00000533123 TBK1Q9UHD2 729 aa18.8■□□□□ 0.6
SMPD1-208ENST00000533123 VPS28Q9UK41 221 aa18.8■□□□□ 0.6
SMPD1-208ENST00000533123 TEX264Q9Y6I9 313 aa18.8■□□□□ 0.6
SMPD1-208ENST00000533123 ANHXE9PGG2 379 aa18.8■□□□□ 0.6
SMPD1-208ENST00000533123 CBX4O00257 560 aa18.8■□□□□ 0.6
SMPD1-208ENST00000533123 TRIM24O15164 1050 aa18.8■□□□□ 0.6
SMPD1-208ENST00000533123 TCEA3O75764 348 aa18.8■□□□□ 0.6
SMPD1-208ENST00000533123 AGTP01019 485 aa18.8■□□□□ 0.6
SMPD1-208ENST00000533123 TPSB2P20231 275 aa18.8■□□□□ 0.6
SMPD1-208ENST00000533123 PPP2R2AP63151 447 aa18.8■□□□□ 0.6
SMPD1-208ENST00000533123 GUCY1A3Q02108 690 aa18.8■□□□□ 0.6
SMPD1-208ENST00000533123 TPSAB1Q15661 275 aa18.8■□□□□ 0.6
SMPD1-208ENST00000533123 FOXR1Q6PIV2 292 aa18.8■□□□□ 0.6
SMPD1-208ENST00000533123 APCDD1Q8J025 514 aa18.8■□□□□ 0.6
SMPD1-208ENST00000533123 PDCD7Q8N8D1 485 aaKnown RBP18.8■□□□□ 0.6
SMPD1-208ENST00000533123 USP33Q8TEY7 942 aa18.8■□□□□ 0.6
SMPD1-208ENST00000533123 ALG14Q96F25 216 aa18.8■□□□□ 0.6
SMPD1-208ENST00000533123 FERMT1Q9BQL6 677 aa18.8■□□□□ 0.6
SMPD1-208ENST00000533123 PHF7Q9BWX1 381 aaPredicted RBP18.8■□□□□ 0.6
SMPD1-208ENST00000533123 ACE2Q9BYF1 805 aaPredicted RBP18.8■□□□□ 0.6
SMPD1-208ENST00000533123 KIAA1522Q9P206 1035 aaPredicted RBP18.8■□□□□ 0.6
SMPD1-208ENST00000533123 KLHL8Q9P2G9 620 aaPredicted RBP18.8■□□□□ 0.6
SMPD1-208ENST00000533123 OR51B4Q9Y5P0 310 aa18.8■□□□□ 0.6
SMPD1-208ENST00000533123 ACTL7AQ9Y615 435 aa18.8■□□□□ 0.6
SMPD1-208ENST00000533123 MATN3O15232 486 aa18.79■□□□□ 0.6
SMPD1-208ENST00000533123 JCHAINP01591 159 aa18.79■□□□□ 0.6
SMPD1-208ENST00000533123 CCNB1P14635 433 aa18.79■□□□□ 0.6
SMPD1-208ENST00000533123 ZNF33AQ06730 810 aa18.79■□□□□ 0.6
SMPD1-208ENST00000533123 SMAD2Q15796 467 aaKnown RBP18.79■□□□□ 0.6
SMPD1-208ENST00000533123 LEXMQ3ZCV2 418 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms