RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 TPI1P60174 286 aa30.85■■■□□ 2.53
SSSCA1-207ENST00000533115 HNRNPDQ14103 355 aaKnown RBP30.85■■■□□ 2.53
SSSCA1-207ENST00000533115 LEKR1Q6ZMV7 388 aa30.85■■■□□ 2.53
SSSCA1-207ENST00000533115 NAXDQ8IW45 347 aa30.85■■■□□ 2.53
SSSCA1-207ENST00000533115 SKA1Q96BD8 255 aa30.85■■■□□ 2.53
SSSCA1-207ENST00000533115 PEBP4Q96S96 227 aa30.85■■■□□ 2.53
SSSCA1-207ENST00000533115 EIF3CQ99613 913 aaKnown RBP30.85■■■□□ 2.53
SSSCA1-207ENST00000533115 SNRNP25Q9BV90 132 aaKnown RBP30.85■■■□□ 2.53
SSSCA1-207ENST00000533115 HDAC8Q9BY41 377 aa30.85■■■□□ 2.53
SSSCA1-207ENST00000533115 TM6SF2Q9BZW4 377 aa30.85■■■□□ 2.53
SSSCA1-207ENST00000533115 TSPY26PQ9H489 355 aa30.85■■■□□ 2.53
SSSCA1-207ENST00000533115 DHX35Q9H5Z1 703 aaKnown RBP30.85■■■□□ 2.53
SSSCA1-207ENST00000533115 HECAQ9UBI9 543 aaPredicted RBP30.85■■■□□ 2.53
SSSCA1-207ENST00000533115 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP30.85■■■□□ 2.53
SSSCA1-207ENST00000533115 ZSCAN5CA6NGD5 496 aaPredicted RBP30.84■■■□□ 2.53
SSSCA1-207ENST00000533115 WNT9AO14904 365 aa30.84■■■□□ 2.53
SSSCA1-207ENST00000533115 CD38P28907 300 aa30.84■■■□□ 2.53
SSSCA1-207ENST00000533115 MIPP30301 263 aa30.84■■■□□ 2.53
SSSCA1-207ENST00000533115 MAT2AP31153 395 aaKnown RBP30.84■■■□□ 2.53
SSSCA1-207ENST00000533115 CASP14P31944 242 aa30.84■■■□□ 2.53
SSSCA1-207ENST00000533115 NUDT1P36639 197 aa30.84■■■□□ 2.53
SSSCA1-207ENST00000533115 CA9Q16790 459 aa30.84■■■□□ 2.53
SSSCA1-207ENST00000533115 PARP15Q460N3 678 aa30.84■■■□□ 2.53
SSSCA1-207ENST00000533115 ERN2Q76MJ5 926 aaKnown RBP30.84■■■□□ 2.53
SSSCA1-207ENST00000533115 UMODL1-AS1Q8N2C9 162 aa30.84■■■□□ 2.53
SSSCA1-207ENST00000533115 CAMK1GQ96NX5 476 aa30.84■■■□□ 2.53
SSSCA1-207ENST00000533115 RASA4BC9J798 803 aa30.83■■■□□ 2.53
SSSCA1-207ENST00000533115 RASA4O43374 803 aa30.83■■■□□ 2.53
SSSCA1-207ENST00000533115 BUB1O43683 1085 aa30.83■■■□□ 2.53
SSSCA1-207ENST00000533115 PRPSAP2O60256 369 aa30.83■■■□□ 2.53
SSSCA1-207ENST00000533115 WNT1P04628 370 aa30.83■■■□□ 2.53
SSSCA1-207ENST00000533115 NAPEPLDQ6IQ20 393 aa30.83■■■□□ 2.53
SSSCA1-207ENST00000533115 HMCESQ96FZ2 354 aa30.83■■■□□ 2.53
SSSCA1-207ENST00000533115 NCAPGQ9BPX3 1015 aa30.83■■■□□ 2.53
SSSCA1-207ENST00000533115 ZDHHC6Q9H6R6 413 aa30.83■■■□□ 2.53
SSSCA1-207ENST00000533115 DONSONQ9NYP3 566 aa30.83■■■□□ 2.53
SSSCA1-207ENST00000533115 ANGPTL2Q9UKU9 493 aa30.83■■■□□ 2.53
SSSCA1-207ENST00000533115 PCDHGB2Q9Y5G2 931 aa30.83■■■□□ 2.53
SSSCA1-207ENST00000533115 A0A087X0T9 212 aa30.82■■■□□ 2.52
SSSCA1-207ENST00000533115 SPAARA0A1B0GVQ0 90 aa30.82■■■□□ 2.52
SSSCA1-207ENST00000533115 A0A1W2PR77 199 aa30.82■■■□□ 2.52
SSSCA1-207ENST00000533115 EEF2KO00418 725 aaKnown RBP30.82■■■□□ 2.52
SSSCA1-207ENST00000533115 KCNK3O14649 394 aa30.82■■■□□ 2.52
SSSCA1-207ENST00000533115 CBFA2T2O43439 604 aa30.82■■■□□ 2.52
SSSCA1-207ENST00000533115 LRCH4O75427 683 aa30.82■■■□□ 2.52
SSSCA1-207ENST00000533115 GSRP00390 522 aa30.82■■■□□ 2.52
SSSCA1-207ENST00000533115 FAM228BP0C875 321 aa30.82■■■□□ 2.52
SSSCA1-207ENST00000533115 SIM1P81133 766 aaPredicted RBP30.82■■■□□ 2.52
SSSCA1-207ENST00000533115 SERINC3Q13530 473 aa30.82■■■□□ 2.52
SSSCA1-207ENST00000533115 NFKBIBQ15653 356 aa30.82■■■□□ 2.52
SSSCA1-207ENST00000533115 ZNF423Q2M1K9 1284 aa30.82■■■□□ 2.52
SSSCA1-207ENST00000533115 NEK5Q6P3R8 708 aa30.82■■■□□ 2.52
SSSCA1-207ENST00000533115 CYP4V2Q6ZWL3 525 aaPredicted RBP30.82■■■□□ 2.52
SSSCA1-207ENST00000533115 PSTKQ8IV42 348 aaKnown RBP30.82■■■□□ 2.52
SSSCA1-207ENST00000533115 RYBPQ8N488 228 aaPredicted RBP30.82■■■□□ 2.52
SSSCA1-207ENST00000533115 OR2AP1Q8NGE2 309 aa30.82■■■□□ 2.52
SSSCA1-207ENST00000533115 KCTD15Q96SI1 283 aaPredicted RBP30.82■■■□□ 2.52
SSSCA1-207ENST00000533115 KLC2Q9H0B6 622 aa30.82■■■□□ 2.52
SSSCA1-207ENST00000533115 THAP2Q9H0W7 228 aa30.82■■■□□ 2.52
SSSCA1-207ENST00000533115 DMTF1Q9Y222 760 aa30.82■■■□□ 2.52
SSSCA1-207ENST00000533115 TMEM131Q92545 1883 aa30.82■■■□□ 2.52
SSSCA1-207ENST00000533115 H0Y8X5 98 aa30.81■■■□□ 2.52
SSSCA1-207ENST00000533115 RNGTTO60942 597 aaKnown RBP30.81■■■□□ 2.52
SSSCA1-207ENST00000533115 ITGB7P26010 798 aa30.81■■■□□ 2.52
SSSCA1-207ENST00000533115 SNRPD1P62314 119 aaKnown RBP30.81■■■□□ 2.52
SSSCA1-207ENST00000533115 FAM193AP78312 1265 aa30.81■■■□□ 2.52
SSSCA1-207ENST00000533115 ACAP1Q15027 740 aa30.81■■■□□ 2.52
SSSCA1-207ENST00000533115 SETMARQ53H47 684 aaPredicted RBP30.81■■■□□ 2.52
SSSCA1-207ENST00000533115 SLC45A4Q5BKX6 768 aa30.81■■■□□ 2.52
SSSCA1-207ENST00000533115 DBX2Q6ZNG2 339 aa30.81■■■□□ 2.52
SSSCA1-207ENST00000533115 CASKIN2Q8WXE0 1202 aa30.81■■■□□ 2.52
SSSCA1-207ENST00000533115 PCDHB9Q9Y5E1 797 aa30.81■■■□□ 2.52
SSSCA1-207ENST00000533115 PCK1P35558 622 aa30.8■■■□□ 2.52
SSSCA1-207ENST00000533115 NEK3P51956 506 aa30.8■■■□□ 2.52
SSSCA1-207ENST00000533115 SHC2P98077 582 aa30.8■■■□□ 2.52
SSSCA1-207ENST00000533115 INO80DQ53TQ3 878 aaPredicted RBP30.8■■■□□ 2.52
SSSCA1-207ENST00000533115 OR6K2Q8NGY2 324 aa30.8■■■□□ 2.52
SSSCA1-207ENST00000533115 LRIG1Q96JA1 1093 aa30.8■■■□□ 2.52
SSSCA1-207ENST00000533115 LRRC19Q9H756 370 aa30.8■■■□□ 2.52
SSSCA1-207ENST00000533115 A0A1W2PQU0 124 aa30.79■■■□□ 2.52
SSSCA1-207ENST00000533115 DFNA5O60443 496 aa30.79■■■□□ 2.52
SSSCA1-207ENST00000533115 TMCC1O94876 653 aa30.79■■■□□ 2.52
SSSCA1-207ENST00000533115 HNRNPH3P31942 346 aaKnown RBP30.79■■■□□ 2.52
SSSCA1-207ENST00000533115 CCT8P50990 548 aa30.79■■■□□ 2.52
SSSCA1-207ENST00000533115 NDST2P52849 883 aa30.79■■■□□ 2.52
SSSCA1-207ENST00000533115 FOXC1Q12948 553 aa30.79■■■□□ 2.52
SSSCA1-207ENST00000533115 SUZ12Q15022 739 aaKnown RBP30.79■■■□□ 2.52
SSSCA1-207ENST00000533115 TRIP6Q15654 476 aaKnown RBP30.79■■■□□ 2.52
SSSCA1-207ENST00000533115 ALKBH5Q6P6C2 394 aaKnown RBP30.79■■■□□ 2.52
SSSCA1-207ENST00000533115 RFX8Q6ZV50 586 aa30.79■■■□□ 2.52
SSSCA1-207ENST00000533115 SETD7Q8WTS6 366 aaKnown RBP30.79■■■□□ 2.52
SSSCA1-207ENST00000533115 PCOLCE2Q9UKZ9 415 aa30.79■■■□□ 2.52
SSSCA1-207ENST00000533115 FLRT2O43155 660 aa30.78■■■□□ 2.52
SSSCA1-207ENST00000533115 DAPK3O43293 454 aa30.78■■■□□ 2.52
SSSCA1-207ENST00000533115 CBFA2T3O75081 653 aa30.78■■■□□ 2.52
SSSCA1-207ENST00000533115 POP4O95707 220 aaKnown RBP30.78■■■□□ 2.52
SSSCA1-207ENST00000533115 ADRB3P13945 408 aa30.78■■■□□ 2.52
SSSCA1-207ENST00000533115 GKP32189 559 aa30.78■■■□□ 2.52
SSSCA1-207ENST00000533115 MYLK3Q32MK0 819 aa30.78■■■□□ 2.52
SSSCA1-207ENST00000533115 PPP6R3Q5H9R7 873 aaPredicted RBP30.78■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms