RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 TCEAL2Q9H3H9 227 aaPredicted RBP13.31□□□□□ -0.28
COPB1-209ENST00000533096 SYNCQ9H7C4 482 aa13.31□□□□□ -0.28
COPB1-209ENST00000533096 TMPRSS4Q9NRS4 437 aa13.31□□□□□ -0.28
COPB1-209ENST00000533096 HS3ST2Q9Y278 367 aa13.31□□□□□ -0.28
COPB1-209ENST00000533096 P4HA2O15460 535 aa13.3□□□□□ -0.28
COPB1-209ENST00000533096 SPINT1O43278 529 aa13.3□□□□□ -0.28
COPB1-209ENST00000533096 EFSO43281 561 aa13.3□□□□□ -0.28
COPB1-209ENST00000533096 GJB6O95452 261 aa13.3□□□□□ -0.28
COPB1-209ENST00000533096 OR1E1P30953 314 aa13.3□□□□□ -0.28
COPB1-209ENST00000533096 GKP32189 559 aa13.3□□□□□ -0.28
COPB1-209ENST00000533096 RABIFP47224 123 aa13.3□□□□□ -0.28
COPB1-209ENST00000533096 NEK3P51956 506 aa13.3□□□□□ -0.28
COPB1-209ENST00000533096 NFKB2Q00653 900 aa13.3□□□□□ -0.28
COPB1-209ENST00000533096 CLN3Q13286 438 aa13.3□□□□□ -0.28
COPB1-209ENST00000533096 TMEM259Q4ZIN3 620 aa13.3□□□□□ -0.28
COPB1-209ENST00000533096 PRRT3Q5FWE3 981 aa13.3□□□□□ -0.28
COPB1-209ENST00000533096 TPRG1LQ5T0D9 272 aa13.3□□□□□ -0.28
COPB1-209ENST00000533096 LRRC31Q6UY01 552 aa13.3□□□□□ -0.28
COPB1-209ENST00000533096 C11orf57Q6ZUT1 292 aaPredicted RBP13.3□□□□□ -0.28
COPB1-209ENST00000533096 FAM183BPQ6ZVS7 135 aa13.3□□□□□ -0.28
COPB1-209ENST00000533096 USP53Q70EK8 1073 aa13.3□□□□□ -0.28
COPB1-209ENST00000533096 PARGQ86W56 976 aa13.3□□□□□ -0.28
COPB1-209ENST00000533096 RBFAQ8N0V3 343 aa13.3□□□□□ -0.28
COPB1-209ENST00000533096 EXD3Q8N9H8 876 aa13.3□□□□□ -0.28
COPB1-209ENST00000533096 TPCN2Q8NHX9 752 aa13.3□□□□□ -0.28
COPB1-209ENST00000533096 WDR36Q8NI36 951 aaKnown RBP13.3□□□□□ -0.28
COPB1-209ENST00000533096 FAM174AQ8TBP5 190 aa13.3□□□□□ -0.28
COPB1-209ENST00000533096 SLC2A13Q96QE2 648 aa13.3□□□□□ -0.28
COPB1-209ENST00000533096 CCNL2Q96S94 520 aaPredicted RBP13.3□□□□□ -0.28
COPB1-209ENST00000533096 HEPHQ9BQS7 1158 aa13.3□□□□□ -0.28
COPB1-209ENST00000533096 CRACR2AQ9BSW2 395 aa13.3□□□□□ -0.28
COPB1-209ENST00000533096 ANLNQ9NQW6 1124 aa13.3□□□□□ -0.28
COPB1-209ENST00000533096 SALL4Q9UJQ4 1053 aa13.3□□□□□ -0.28
COPB1-209ENST00000533096 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.3□□□□□ -0.28
COPB1-209ENST00000533096 CSNK1G3Q9Y6M4 447 aa13.3□□□□□ -0.28
COPB1-209ENST00000533096 ZNF462Q96JM2 2506 aa13.29□□□□□ -0.28
COPB1-209ENST00000533096 EME2A4GXA9 379 aaPredicted RBP13.29□□□□□ -0.28
COPB1-209ENST00000533096 PMM2O15305 246 aa13.29□□□□□ -0.28
COPB1-209ENST00000533096 HSF2BPO75031 334 aa13.29□□□□□ -0.28
COPB1-209ENST00000533096 GCATO75600 419 aa13.29□□□□□ -0.28
COPB1-209ENST00000533096 AFPP02771 609 aaKnown RBP13.29□□□□□ -0.28
COPB1-209ENST00000533096 ANXA6P08133 673 aa13.29□□□□□ -0.28
COPB1-209ENST00000533096 GLI1P08151 1106 aa13.29□□□□□ -0.28
COPB1-209ENST00000533096 ADRB3P13945 408 aa13.29□□□□□ -0.28
COPB1-209ENST00000533096 NME1P15531 152 aaKnown RBP13.29□□□□□ -0.28
COPB1-209ENST00000533096 TFE3P19532 575 aaPredicted RBP13.29□□□□□ -0.28
COPB1-209ENST00000533096 L1CAMP32004 1257 aa13.29□□□□□ -0.28
COPB1-209ENST00000533096 RPIAP49247 311 aa13.29□□□□□ -0.28
COPB1-209ENST00000533096 THOP1P52888 689 aa13.29□□□□□ -0.28
COPB1-209ENST00000533096 APBA1Q02410 837 aa13.29□□□□□ -0.28
COPB1-209ENST00000533096 EIF2B5Q13144 721 aaKnown RBP13.29□□□□□ -0.28
COPB1-209ENST00000533096 TGIF1Q15583 401 aa13.29□□□□□ -0.28
COPB1-209ENST00000533096 ARL13BQ3SXY8 428 aa13.29□□□□□ -0.28
COPB1-209ENST00000533096 COBLL1Q53SF7 1204 aa13.29□□□□□ -0.28
COPB1-209ENST00000533096 CARD16Q5EG05 197 aa13.29□□□□□ -0.28
COPB1-209ENST00000533096 OR6K2Q8NGY2 324 aa13.29□□□□□ -0.28
COPB1-209ENST00000533096 NELFBQ8WX92 580 aa13.29□□□□□ -0.28
COPB1-209ENST00000533096 GLMNQ92990 594 aa13.29□□□□□ -0.28
COPB1-209ENST00000533096 CCDC3Q9BQI4 270 aa13.29□□□□□ -0.28
COPB1-209ENST00000533096 ZDHHC6Q9H6R6 413 aa13.29□□□□□ -0.28
COPB1-209ENST00000533096 EPB41L5Q9HCM4 733 aa13.29□□□□□ -0.28
COPB1-209ENST00000533096 PIGVQ9NUD9 493 aa13.29□□□□□ -0.28
COPB1-209ENST00000533096 NCKIPSDQ9NZQ3 722 aa13.29□□□□□ -0.28
COPB1-209ENST00000533096 HECAQ9UBI9 543 aaPredicted RBP13.29□□□□□ -0.28
COPB1-209ENST00000533096 SPASTQ9UBP0 616 aa13.29□□□□□ -0.28
COPB1-209ENST00000533096 IL17BQ9UHF5 180 aa13.29□□□□□ -0.28
COPB1-209ENST00000533096 PADI4Q9UM07 663 aa13.29□□□□□ -0.28
COPB1-209ENST00000533096 DOLKQ9UPQ8 538 aa13.29□□□□□ -0.28
COPB1-209ENST00000533096 CNTN6Q9UQ52 1028 aa13.29□□□□□ -0.28
COPB1-209ENST00000533096 FCF1Q9Y324 198 aaKnown RBP13.29□□□□□ -0.28
COPB1-209ENST00000533096 PCDHGA8Q9Y5G5 932 aa13.29□□□□□ -0.28
COPB1-209ENST00000533096 FADS3Q9Y5Q0 445 aa13.29□□□□□ -0.28
COPB1-209ENST00000533096 ACTL7AQ9Y615 435 aa13.29□□□□□ -0.28
COPB1-209ENST00000533096 WASF2Q9Y6W5 498 aa13.29□□□□□ -0.28
COPB1-209ENST00000533096 YY2O15391 372 aa13.28□□□□□ -0.28
COPB1-209ENST00000533096 NOS2P35228 1153 aa13.28□□□□□ -0.28
COPB1-209ENST00000533096 SULT1E1P49888 294 aa13.28□□□□□ -0.28
COPB1-209ENST00000533096 SLC6A3Q01959 620 aa13.28□□□□□ -0.28
COPB1-209ENST00000533096 SPIDRQ14159 915 aa13.28□□□□□ -0.28
COPB1-209ENST00000533096 KIAA1161Q6NSJ0 714 aa13.28□□□□□ -0.28
COPB1-209ENST00000533096 RETSATQ6NUM9 610 aa13.28□□□□□ -0.28
COPB1-209ENST00000533096 ESRP1Q6NXG1 681 aaKnown RBP13.28□□□□□ -0.28
COPB1-209ENST00000533096 C22orf39Q6P5X5 142 aa13.28□□□□□ -0.28
COPB1-209ENST00000533096 KYAT3Q6YP21 454 aaKnown RBP13.28□□□□□ -0.28
COPB1-209ENST00000533096 LEKR1Q6ZMV7 388 aa13.28□□□□□ -0.28
COPB1-209ENST00000533096 RD3Q7Z3Z2 195 aa13.28□□□□□ -0.28
COPB1-209ENST00000533096 VPS36Q86VN1 386 aa13.28□□□□□ -0.28
COPB1-209ENST00000533096 SLC35F3Q8IY50 421 aa13.28□□□□□ -0.28
COPB1-209ENST00000533096 FMR1NBQ8N0W7 255 aaPredicted RBP13.28□□□□□ -0.28
COPB1-209ENST00000533096 FBXO39Q8N4B4 442 aa13.28□□□□□ -0.28
COPB1-209ENST00000533096 SNRNP27Q8WVK2 155 aaKnown RBP13.28□□□□□ -0.28
COPB1-209ENST00000533096 BTN2A2Q8WVV5 523 aa13.28□□□□□ -0.28
COPB1-209ENST00000533096 EXTL1Q92935 676 aa13.28□□□□□ -0.28
COPB1-209ENST00000533096 GRAMD1AQ96CP6 724 aa13.28□□□□□ -0.28
COPB1-209ENST00000533096 KLF6Q99612 283 aaPredicted RBP13.28□□□□□ -0.28
COPB1-209ENST00000533096 SRRTQ9BXP5 876 aaKnown RBP13.28□□□□□ -0.28
COPB1-209ENST00000533096 SLC13A1Q9BZW2 595 aa13.28□□□□□ -0.28
COPB1-209ENST00000533096 TM6SF2Q9BZW4 377 aa13.28□□□□□ -0.28
COPB1-209ENST00000533096 ATP13A1Q9HD20 1204 aa13.28□□□□□ -0.28
COPB1-209ENST00000533096 PLCB1Q9NQ66 1216 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms