RNA–Protein interactions for RNA: ENST00000532912.1

TRIM53BP-201, Transcript of tripartite motif containing 53B, pseudogene, humanhuman

BASIC

Gene TRIM53BP, Length 1,720 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53BP-201ENST00000532912 MAN1C1Q9NR34 630 aa8.41□□□□□ -1.06
TRIM53BP-201ENST00000532912 OSER1Q9NX31 292 aa8.41□□□□□ -1.06
TRIM53BP-201ENST00000532912 CPSF2Q9P2I0 782 aaKnown RBP8.41□□□□□ -1.06
TRIM53BP-201ENST00000532912 SLC39A10Q9ULF5 831 aa8.41□□□□□ -1.06
TRIM53BP-201ENST00000532912 TCAF1Q9Y4C2 921 aa8.41□□□□□ -1.06
TRIM53BP-201ENST00000532912 PLXNA3P51805 1871 aa8.41□□□□□ -1.06
TRIM53BP-201ENST00000532912 A0A0U1RQF3 1178 aa8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 E9PBE3 544 aa8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 DFFAO00273 331 aa8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 MAP3K7O43318 606 aa8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 KLHL41O60662 606 aa8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 SKAP2O75563 359 aaPredicted RBP8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 ANXA9O76027 345 aa8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 B3GAT3O94766 335 aa8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 POMCP01189 267 aa8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 SRGAP2BP0DMP2 458 aa8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 SKIP12755 728 aa8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 TYMPP19971 482 aa8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 SP100P23497 879 aaPredicted RBP8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 CD52P31358 61 aa8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 GRIA4P48058 902 aa8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 RAB27AP51159 221 aa8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 HK2P52789 917 aa8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 SLC5A3P53794 718 aa8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 MTTPP55157 894 aa8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 GRIK3Q13003 919 aa8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 CDC16Q13042 620 aa8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 MSLNQ13421 630 aaPredicted RBP8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 SLC12A1Q13621 1099 aa8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 HNRNPDQ14103 355 aaKnown RBP8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 PPP2R5DQ14738 602 aa8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 TAF1CQ15572 869 aaPredicted RBP8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 PAN2Q504Q3 1202 aaKnown RBP8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 FSCBQ5H9T9 825 aa8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 OR52E8Q6IFG1 317 aa8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 LRRC8EQ6NSJ5 796 aa8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 RWDD4Q6NW29 188 aaKnown RBP8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 RANBP10Q6VN20 620 aa8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 C14orf80Q86SX3 495 aa8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 SLC41A1Q8IVJ1 513 aa8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 ZNF683Q8IZ20 524 aa8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 FSTL5Q8N475 847 aaPredicted RBP8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 ATPAF2Q8N5M1 289 aa8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 C2CD4AQ8NCU7 369 aaPredicted RBP8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 PPFIBP2Q8ND30 876 aa8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 KCTD4Q8WVF5 259 aa8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 SUSD3Q96L08 255 aa8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 LENG8Q96PV6 779 aaPredicted RBP8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 FICDQ9BVA6 458 aa8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 FTHL17Q9BXU8 183 aa8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 SHCBP1LQ9BZQ2 653 aa8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 TASP1Q9H6P5 420 aa8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 NOL6Q9H6R4 1146 aaKnown RBP8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 NMUR1Q9HB89 426 aa8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 ATP13A1Q9HD20 1204 aa8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 TCF7L2Q9NQB0 619 aa8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 ABCC13Q9NSE7 274 aa8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 ZDHHC7Q9NXF8 308 aa8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 NDE1Q9NXR1 346 aa8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 SLC2A6Q9UGQ3 507 aa8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 ZDHHC2Q9UIJ5 367 aa8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 DSEQ9UL01 958 aa8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 PADI3Q9ULW8 664 aa8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 POMPQ9Y244 141 aa8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 MYO16Q9Y6X6 1858 aa8.4□□□□□ -1.06
TRIM53BP-201ENST00000532912 FAM95CA0A1B0GW59 222 aa8.4□□□□□ -1.07
TRIM53BP-201ENST00000532912 CCDC78A2IDD5 438 aa8.4□□□□□ -1.07
TRIM53BP-201ENST00000532912 F8W810 466 aa8.4□□□□□ -1.07
TRIM53BP-201ENST00000532912 H3BNX3 289 aa8.4□□□□□ -1.07
TRIM53BP-201ENST00000532912 SLC22A2O15244 555 aa8.4□□□□□ -1.07
TRIM53BP-201ENST00000532912 HDAC3O15379 428 aa8.4□□□□□ -1.07
TRIM53BP-201ENST00000532912 MAP3K13O43283 966 aa8.4□□□□□ -1.07
TRIM53BP-201ENST00000532912 MSI1O43347 362 aaKnown RBP8.4□□□□□ -1.07
TRIM53BP-201ENST00000532912 DLX3O60479 287 aa8.4□□□□□ -1.07
TRIM53BP-201ENST00000532912 ZMPSTE24O75844 475 aa8.4□□□□□ -1.07
TRIM53BP-201ENST00000532912 PDE5AO76074 875 aa8.4□□□□□ -1.07
TRIM53BP-201ENST00000532912 DDHD2O94830 711 aa8.4□□□□□ -1.07
TRIM53BP-201ENST00000532912 PIGNO95427 931 aa8.4□□□□□ -1.07
TRIM53BP-201ENST00000532912 JUNP05412 331 aaKnown RBP8.4□□□□□ -1.07
TRIM53BP-201ENST00000532912 NCF2P19878 526 aaPredicted RBP8.4□□□□□ -1.07
TRIM53BP-201ENST00000532912 PAX3P23760 479 aa8.4□□□□□ -1.07
TRIM53BP-201ENST00000532912 PIK3R1P27986 724 aa8.4□□□□□ -1.07
TRIM53BP-201ENST00000532912 CCR1P32246 355 aa8.4□□□□□ -1.07
TRIM53BP-201ENST00000532912 SLC1A2P43004 574 aa8.4□□□□□ -1.07
TRIM53BP-201ENST00000532912 ERFP50548 548 aa8.4□□□□□ -1.07
TRIM53BP-201ENST00000532912 RPL14P50914 215 aaKnown RBP8.4□□□□□ -1.07
TRIM53BP-201ENST00000532912 GEMP55040 296 aa8.4□□□□□ -1.07
TRIM53BP-201ENST00000532912 RAB10P61026 200 aa8.4□□□□□ -1.07
TRIM53BP-201ENST00000532912 PRKAA1Q13131 559 aa8.4□□□□□ -1.07
TRIM53BP-201ENST00000532912 CTBP1Q13363 440 aa8.4□□□□□ -1.07
TRIM53BP-201ENST00000532912 TUSC3Q13454 348 aa8.4□□□□□ -1.07
TRIM53BP-201ENST00000532912 ZNF460Q14592 562 aa8.4□□□□□ -1.07
TRIM53BP-201ENST00000532912 USP10Q14694 798 aaKnown RBP8.4□□□□□ -1.07
TRIM53BP-201ENST00000532912 POU6F1Q14863 301 aa8.4□□□□□ -1.07
TRIM53BP-201ENST00000532912 GSTA3Q16772 222 aa8.4□□□□□ -1.07
TRIM53BP-201ENST00000532912 UGP2Q16851 508 aa8.4□□□□□ -1.07
TRIM53BP-201ENST00000532912 LSM12Q3MHD2 195 aaKnown RBP8.4□□□□□ -1.07
TRIM53BP-201ENST00000532912 ARL13AQ5H913 290 aaPredicted RBP8.4□□□□□ -1.07
TRIM53BP-201ENST00000532912 GNASQ5JWF2 1037 aa8.4□□□□□ -1.07
TRIM53BP-201ENST00000532912 ARMC3Q5W041 872 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms