RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 SEL1L3Q68CR1 1132 aa17.15■□□□□ 0.34
CPSF1-207ENST00000531727 RWDD4Q6NW29 188 aaKnown RBP17.15■□□□□ 0.34
CPSF1-207ENST00000531727 C19orf48Q6RUI8 117 aa17.15■□□□□ 0.34
CPSF1-207ENST00000531727 NLRP14Q86W24 1093 aa17.15■□□□□ 0.34
CPSF1-207ENST00000531727 CENPIQ92674 756 aaPredicted RBP17.15■□□□□ 0.34
CPSF1-207ENST00000531727 ARHGEF2Q92974 986 aaKnown RBP17.15■□□□□ 0.34
CPSF1-207ENST00000531727 ISG20Q96AZ6 181 aaKnown RBP17.15■□□□□ 0.34
CPSF1-207ENST00000531727 PCDHB18PQ96TA0 734 aa17.15■□□□□ 0.34
CPSF1-207ENST00000531727 CALN1Q9BXU9 219 aa17.15■□□□□ 0.34
CPSF1-207ENST00000531727 NDFIP2Q9NV92 336 aa17.15■□□□□ 0.34
CPSF1-207ENST00000531727 KLHL11Q9NVR0 708 aa17.15■□□□□ 0.34
CPSF1-207ENST00000531727 TMEM248Q9NWD8 314 aa17.15■□□□□ 0.34
CPSF1-207ENST00000531727 NEU3Q9UQ49 428 aa17.15■□□□□ 0.34
CPSF1-207ENST00000531727 FCF1Q9Y324 198 aaKnown RBP17.15■□□□□ 0.34
CPSF1-207ENST00000531727 ACTL7AQ9Y615 435 aa17.15■□□□□ 0.34
CPSF1-207ENST00000531727 NBEAQ8NFP9 2946 aa17.15■□□□□ 0.34
CPSF1-207ENST00000531727 FAM72CH0Y354 149 aa17.14■□□□□ 0.33
CPSF1-207ENST00000531727 KRT3P12035 628 aa17.14■□□□□ 0.33
CPSF1-207ENST00000531727 JUPP14923 745 aa17.14■□□□□ 0.33
CPSF1-207ENST00000531727 L1CAMP32004 1257 aa17.14■□□□□ 0.33
CPSF1-207ENST00000531727 NSFP46459 744 aaKnown RBP17.14■□□□□ 0.33
CPSF1-207ENST00000531727 HDAC4P56524 1084 aa17.14■□□□□ 0.33
CPSF1-207ENST00000531727 CLDN6P56747 220 aa17.14■□□□□ 0.33
CPSF1-207ENST00000531727 ZNF211Q13398 564 aaPredicted RBP17.14■□□□□ 0.33
CPSF1-207ENST00000531727 SYCP1Q15431 976 aa17.14■□□□□ 0.33
CPSF1-207ENST00000531727 PROX2Q3B8N5 592 aa17.14■□□□□ 0.33
CPSF1-207ENST00000531727 FAM72AQ5TYM5 149 aa17.14■□□□□ 0.33
CPSF1-207ENST00000531727 FAM72DQ6L9T8 149 aa17.14■□□□□ 0.33
CPSF1-207ENST00000531727 KIAA1161Q6NSJ0 714 aa17.14■□□□□ 0.33
CPSF1-207ENST00000531727 FBXL19Q6PCT2 694 aa17.14■□□□□ 0.33
CPSF1-207ENST00000531727 GCNT7Q6ZNI0 430 aa17.14■□□□□ 0.33
CPSF1-207ENST00000531727 ABI3BPQ7Z7G0 1075 aa17.14■□□□□ 0.33
CPSF1-207ENST00000531727 FAM72BQ86X60 149 aa17.14■□□□□ 0.33
CPSF1-207ENST00000531727 PLPP6Q8IY26 295 aa17.14■□□□□ 0.33
CPSF1-207ENST00000531727 SLC25A45Q8N413 288 aa17.14■□□□□ 0.33
CPSF1-207ENST00000531727 CCDC185Q8N715 623 aa17.14■□□□□ 0.33
CPSF1-207ENST00000531727 NEK11Q8NG66 645 aa17.14■□□□□ 0.33
CPSF1-207ENST00000531727 OR13H1Q8NG92 308 aa17.14■□□□□ 0.33
CPSF1-207ENST00000531727 FAM174AQ8TBP5 190 aa17.14■□□□□ 0.33
CPSF1-207ENST00000531727 ADAM22Q9P0K1 906 aa17.14■□□□□ 0.33
CPSF1-207ENST00000531727 LIMA1Q9UHB6 759 aaKnown RBP17.14■□□□□ 0.33
CPSF1-207ENST00000531727 DNAI1Q9UI46 699 aa17.14■□□□□ 0.33
CPSF1-207ENST00000531727 FADS3Q9Y5Q0 445 aa17.14■□□□□ 0.33
CPSF1-207ENST00000531727 ITPR1Q14643 2758 aa17.13■□□□□ 0.33
CPSF1-207ENST00000531727 LGALS16A8MUM7 142 aa17.13■□□□□ 0.33
CPSF1-207ENST00000531727 TRIM38O00635 465 aa17.13■□□□□ 0.33
CPSF1-207ENST00000531727 AP1G1O43747 822 aa17.13■□□□□ 0.33
CPSF1-207ENST00000531727 LRIG2O94898 1065 aa17.13■□□□□ 0.33
CPSF1-207ENST00000531727 PLEKP08567 350 aaPredicted RBP17.13■□□□□ 0.33
CPSF1-207ENST00000531727 DGKAP23743 735 aa17.13■□□□□ 0.33
CPSF1-207ENST00000531727 ACP1P24666 158 aa17.13■□□□□ 0.33
CPSF1-207ENST00000531727 RFC1P35251 1148 aaPredicted RBP17.13■□□□□ 0.33
CPSF1-207ENST00000531727 GEMIN4P57678 1058 aaKnown RBP17.13■□□□□ 0.33
CPSF1-207ENST00000531727 CLDN2P57739 230 aa17.13■□□□□ 0.33
CPSF1-207ENST00000531727 RPS21P63220 83 aaKnown RBP17.13■□□□□ 0.33
CPSF1-207ENST00000531727 CLEC16AQ2KHT3 1053 aa17.13■□□□□ 0.33
CPSF1-207ENST00000531727 COL28A1Q2UY09 1125 aa17.13■□□□□ 0.33
CPSF1-207ENST00000531727 HES3Q5TGS1 186 aa17.13■□□□□ 0.33
CPSF1-207ENST00000531727 PARS2Q7L3T8 475 aaKnown RBP17.13■□□□□ 0.33
CPSF1-207ENST00000531727 PHF13Q86YI8 300 aaPredicted RBP17.13■□□□□ 0.33
CPSF1-207ENST00000531727 ANKRD20A12PQ8NF67 263 aa17.13■□□□□ 0.33
CPSF1-207ENST00000531727 FAM172AQ8WUF8 416 aa17.13■□□□□ 0.33
CPSF1-207ENST00000531727 NTAN1Q96AB6 310 aa17.13■□□□□ 0.33
CPSF1-207ENST00000531727 NXPE2Q96DL1 559 aa17.13■□□□□ 0.33
CPSF1-207ENST00000531727 TBC1D31Q96DN5 1066 aa17.13■□□□□ 0.33
CPSF1-207ENST00000531727 FEM1CQ96JP0 617 aa17.13■□□□□ 0.33
CPSF1-207ENST00000531727 PCMTD1Q96MG8 357 aaPredicted RBP17.13■□□□□ 0.33
CPSF1-207ENST00000531727 SELENOOQ9BVL4 669 aa17.13■□□□□ 0.33
CPSF1-207ENST00000531727 MAGEB5Q9BZ81 275 aa17.13■□□□□ 0.33
CPSF1-207ENST00000531727 TM6SF2Q9BZW4 377 aa17.13■□□□□ 0.33
CPSF1-207ENST00000531727 MAGEH1Q9H213 219 aa17.13■□□□□ 0.33
CPSF1-207ENST00000531727 ZDHHC6Q9H6R6 413 aa17.13■□□□□ 0.33
CPSF1-207ENST00000531727 SCUBE2Q9NQ36 999 aa17.13■□□□□ 0.33
CPSF1-207ENST00000531727 ANO10Q9NW15 660 aa17.13■□□□□ 0.33
CPSF1-207ENST00000531727 HS3ST3A1Q9Y663 406 aa17.13■□□□□ 0.33
CPSF1-207ENST00000531727 ANKRD11Q6UB99 2663 aaPredicted RBP17.13■□□□□ 0.33
CPSF1-207ENST00000531727 A6NNZ2 444 aa17.12■□□□□ 0.33
CPSF1-207ENST00000531727 SIGLEC6O43699 453 aa17.12■□□□□ 0.33
CPSF1-207ENST00000531727 CALB1P05937 261 aa17.12■□□□□ 0.33
CPSF1-207ENST00000531727 GPD1P21695 349 aa17.12■□□□□ 0.33
CPSF1-207ENST00000531727 ANP32AP39687 249 aaKnown RBP17.12■□□□□ 0.33
CPSF1-207ENST00000531727 MYL5Q02045 173 aa17.12■□□□□ 0.33
CPSF1-207ENST00000531727 MAPK8IP2Q13387 824 aaPredicted RBP17.12■□□□□ 0.33
CPSF1-207ENST00000531727 SASS6Q6UVJ0 657 aa17.12■□□□□ 0.33
CPSF1-207ENST00000531727 ZSCAN30Q86W11 494 aa17.12■□□□□ 0.33
CPSF1-207ENST00000531727 DCP2Q8IU60 420 aaKnown RBP17.12■□□□□ 0.33
CPSF1-207ENST00000531727 SLC22A18ASQ8N1D0 253 aa17.12■□□□□ 0.33
CPSF1-207ENST00000531727 C3orf20Q8ND61 904 aa17.12■□□□□ 0.33
CPSF1-207ENST00000531727 OR4C6Q8NH72 309 aa17.12■□□□□ 0.33
CPSF1-207ENST00000531727 HNRNPLLQ8WVV9 542 aaKnown RBP17.12■□□□□ 0.33
CPSF1-207ENST00000531727 IFT43Q96FT9 208 aa17.12■□□□□ 0.33
CPSF1-207ENST00000531727 LRIG1Q96JA1 1093 aa17.12■□□□□ 0.33
CPSF1-207ENST00000531727 SLC17A9Q9BYT1 436 aa17.12■□□□□ 0.33
CPSF1-207ENST00000531727 UCKL1Q9NWZ5 548 aa17.12■□□□□ 0.33
CPSF1-207ENST00000531727 HPCAL4Q9UM19 191 aa17.12■□□□□ 0.33
CPSF1-207ENST00000531727 RAMP2O60895 175 aa17.11■□□□□ 0.33
CPSF1-207ENST00000531727 PIAS2O75928 621 aa17.11■□□□□ 0.33
CPSF1-207ENST00000531727 GSRP00390 522 aa17.11■□□□□ 0.33
CPSF1-207ENST00000531727 HOXB3P14651 431 aaPredicted RBP17.11■□□□□ 0.33
CPSF1-207ENST00000531727 UBXN1Q04323 297 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms