RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 EIF3BP55884 814 aaKnown RBP4.71□□□□□ -1.66
USP47-211ENST00000531513 E2F1Q01094 437 aa4.71□□□□□ -1.66
USP47-211ENST00000531513 CALD1Q05682 793 aaKnown RBP4.71□□□□□ -1.66
USP47-211ENST00000531513 PSMD6Q15008 389 aa4.71□□□□□ -1.66
USP47-211ENST00000531513 TRIP6Q15654 476 aaKnown RBP4.71□□□□□ -1.66
USP47-211ENST00000531513 SLC39A5Q6ZMH5 540 aa4.71□□□□□ -1.66
USP47-211ENST00000531513 PRPF39Q86UA1 669 aaKnown RBP4.71□□□□□ -1.66
USP47-211ENST00000531513 ZDHHC17Q8IUH5 632 aa4.71□□□□□ -1.66
USP47-211ENST00000531513 TAGAPQ8N103 731 aa4.71□□□□□ -1.66
USP47-211ENST00000531513 SRBD1Q8N5C6 995 aaKnown RBP4.71□□□□□ -1.66
USP47-211ENST00000531513 WDTC1Q8N5D0 677 aa4.71□□□□□ -1.66
USP47-211ENST00000531513 NANOGP1Q8N7R0 232 aa4.71□□□□□ -1.66
USP47-211ENST00000531513 ENDOVQ8N8Q3 282 aaKnown RBP4.71□□□□□ -1.66
USP47-211ENST00000531513 NRACQ8N912 160 aa4.71□□□□□ -1.66
USP47-211ENST00000531513 SRFBP1Q8NEF9 429 aaKnown RBP4.71□□□□□ -1.66
USP47-211ENST00000531513 PRSS3P2Q8NHM4 247 aa4.71□□□□□ -1.66
USP47-211ENST00000531513 SCFD2Q8WU76 684 aa4.71□□□□□ -1.66
USP47-211ENST00000531513 NCSTNQ92542 709 aa4.71□□□□□ -1.66
USP47-211ENST00000531513 CNOT9Q92600 299 aaKnown RBP4.71□□□□□ -1.66
USP47-211ENST00000531513 PERPQ96FX8 193 aa4.71□□□□□ -1.66
USP47-211ENST00000531513 RADILQ96JH8 1075 aa4.71□□□□□ -1.66
USP47-211ENST00000531513 PIP5K1AQ99755 562 aa4.71□□□□□ -1.66
USP47-211ENST00000531513 FTOQ9C0B1 505 aaKnown RBP eCLIP4.71□□□□□ -1.66
USP47-211ENST00000531513 EBF3Q9H4W6 596 aa4.71□□□□□ -1.66
USP47-211ENST00000531513 TTC12Q9H892 705 aaPredicted RBP4.71□□□□□ -1.66
USP47-211ENST00000531513 ABHD10Q9NUJ1 306 aa4.71□□□□□ -1.66
USP47-211ENST00000531513 MPP6Q9NZW5 540 aa4.71□□□□□ -1.66
USP47-211ENST00000531513 VPS4AQ9UN37 437 aa4.71□□□□□ -1.66
USP47-211ENST00000531513 MAGED1Q9Y5V3 778 aaPredicted RBP4.71□□□□□ -1.66
USP47-211ENST00000531513 KCNE2Q9Y6J6 123 aa4.71□□□□□ -1.66
USP47-211ENST00000531513 WDR17Q8IZU2 1322 aa4.71□□□□□ -1.66
USP47-211ENST00000531513 H7C0S8 307 aa4.7□□□□□ -1.66
USP47-211ENST00000531513 H7C1Q1 480 aa4.7□□□□□ -1.66
USP47-211ENST00000531513 SOCS2O14508 198 aa4.7□□□□□ -1.66
USP47-211ENST00000531513 PER2O15055 1255 aa4.7□□□□□ -1.66
USP47-211ENST00000531513 ERAL1O75616 437 aaKnown RBP4.7□□□□□ -1.66
USP47-211ENST00000531513 MBPP02686 304 aaPredicted RBP4.7□□□□□ -1.66
USP47-211ENST00000531513 VDRP11473 427 aa4.7□□□□□ -1.66
USP47-211ENST00000531513 CYP4B1P13584 511 aa4.7□□□□□ -1.66
USP47-211ENST00000531513 CTCFP49711 727 aaPredicted RBP4.7□□□□□ -1.66
USP47-211ENST00000531513 DIO1P49895 249 aa4.7□□□□□ -1.66
USP47-211ENST00000531513 TPTEP56180 551 aa4.7□□□□□ -1.66
USP47-211ENST00000531513 SNX16P57768 344 aa4.7□□□□□ -1.66
USP47-211ENST00000531513 GPC5P78333 572 aa4.7□□□□□ -1.66
USP47-211ENST00000531513 RAE1P78406 368 aaKnown RBP4.7□□□□□ -1.66
USP47-211ENST00000531513 NEXNQ0ZGT2 675 aa4.7□□□□□ -1.66
USP47-211ENST00000531513 CDC16Q13042 620 aa4.7□□□□□ -1.66
USP47-211ENST00000531513 STK4Q13043 487 aa4.7□□□□□ -1.66
USP47-211ENST00000531513 NAPEPLDQ6IQ20 393 aa4.7□□□□□ -1.66
USP47-211ENST00000531513 NAA16Q6N069 864 aaPredicted RBP4.7□□□□□ -1.66
USP47-211ENST00000531513 RPUSD3Q6P087 351 aaKnown RBP4.7□□□□□ -1.66
USP47-211ENST00000531513 CYP20A1Q6UW02 462 aa4.7□□□□□ -1.66
USP47-211ENST00000531513 KIRREL2Q6UWL6 708 aa4.7□□□□□ -1.66
USP47-211ENST00000531513 KYAT3Q6YP21 454 aaKnown RBP4.7□□□□□ -1.66
USP47-211ENST00000531513 SCN4BQ8IWT1 228 aa4.7□□□□□ -1.66
USP47-211ENST00000531513 LAS2Q8IYD9 372 aa4.7□□□□□ -1.66
USP47-211ENST00000531513 C12orf76Q8N812 135 aaPredicted RBP4.7□□□□□ -1.66
USP47-211ENST00000531513 HTATIP2Q9BUP3 242 aa4.7□□□□□ -1.66
USP47-211ENST00000531513 NPLQ9BXD5 320 aaPredicted RBP4.7□□□□□ -1.66
USP47-211ENST00000531513 EPHX3Q9H6B9 360 aa4.7□□□□□ -1.66
USP47-211ENST00000531513 USP29Q9HBJ7 922 aa4.7□□□□□ -1.66
USP47-211ENST00000531513 SNX15Q9NRS6 342 aa4.7□□□□□ -1.66
USP47-211ENST00000531513 EHD2Q9NZN4 543 aa4.7□□□□□ -1.66
USP47-211ENST00000531513 LIMA1Q9UHB6 759 aaKnown RBP4.7□□□□□ -1.66
USP47-211ENST00000531513 SLCO3A1Q9UIG8 710 aa4.7□□□□□ -1.66
USP47-211ENST00000531513 CCNL1Q9UK58 526 aaPredicted RBP4.7□□□□□ -1.66
USP47-211ENST00000531513 AMFRQ9UKV5 643 aa4.7□□□□□ -1.66
USP47-211ENST00000531513 TEX13CA0A0J9YWL9 993 aa4.69□□□□□ -1.66
USP47-211ENST00000531513 FAM170AA1A519 330 aa4.69□□□□□ -1.66
USP47-211ENST00000531513 TSPY2A6NKD2 308 aa4.69□□□□□ -1.66
USP47-211ENST00000531513 C16orf96A6NNT2 1141 aa4.69□□□□□ -1.66
USP47-211ENST00000531513 PRAMEF2O60811 474 aa4.69□□□□□ -1.66
USP47-211ENST00000531513 EIF2S1P05198 315 aaKnown RBP4.69□□□□□ -1.66
USP47-211ENST00000531513 TSPY3P0CV98 308 aa4.69□□□□□ -1.66
USP47-211ENST00000531513 TSPY8P0CW00 308 aa4.69□□□□□ -1.66
USP47-211ENST00000531513 RARGP13631 454 aa4.69□□□□□ -1.66
USP47-211ENST00000531513 NNMTP40261 264 aa4.69□□□□□ -1.66
USP47-211ENST00000531513 MTNR1AP48039 350 aa4.69□□□□□ -1.66
USP47-211ENST00000531513 CPA2P48052 419 aa4.69□□□□□ -1.66
USP47-211ENST00000531513 AGTR2P50052 363 aa4.69□□□□□ -1.66
USP47-211ENST00000531513 ZBED6P86452 979 aa4.69□□□□□ -1.66
USP47-211ENST00000531513 EFNB1P98172 346 aa4.69□□□□□ -1.66
USP47-211ENST00000531513 TSPY1Q01534 308 aa4.69□□□□□ -1.66
USP47-211ENST00000531513 TMEM115Q12893 351 aaPredicted RBP4.69□□□□□ -1.66
USP47-211ENST00000531513 BYSLQ13895 437 aaKnown RBP4.69□□□□□ -1.66
USP47-211ENST00000531513 MED22Q15528 200 aa4.69□□□□□ -1.66
USP47-211ENST00000531513 TBC1D25Q3MII6 688 aa4.69□□□□□ -1.66
USP47-211ENST00000531513 PLEKHS1Q5SXH7 462 aa4.69□□□□□ -1.66
USP47-211ENST00000531513 DENND2CQ68D51 928 aa4.69□□□□□ -1.66
USP47-211ENST00000531513 MTFR2Q6P444 385 aa4.69□□□□□ -1.66
USP47-211ENST00000531513 GJB7Q6PEY0 223 aa4.69□□□□□ -1.66
USP47-211ENST00000531513 NCEH1Q6PIU2 408 aa4.69□□□□□ -1.66
USP47-211ENST00000531513 RRM2BQ7LG56 351 aa4.69□□□□□ -1.66
USP47-211ENST00000531513 BRSK2Q8IWQ3 736 aa4.69□□□□□ -1.66
USP47-211ENST00000531513 C17orf53Q8N3J3 647 aaPredicted RBP4.69□□□□□ -1.66
USP47-211ENST00000531513 ABHD11Q8NFV4 315 aa4.69□□□□□ -1.66
USP47-211ENST00000531513 RAB40AQ8WXH6 277 aa4.69□□□□□ -1.66
USP47-211ENST00000531513 ARHGEF2Q92974 986 aaKnown RBP4.69□□□□□ -1.66
USP47-211ENST00000531513 KLHL29Q96CT2 875 aa4.69□□□□□ -1.66
USP47-211ENST00000531513 DAZAP1Q96EP5 407 aaKnown RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms