RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 CLCA2Q9UQC9 943 aa13.07□□□□□ -0.32
TM9SF1-211ENST00000531406 ACACAQ13085 2346 aa13.06□□□□□ -0.32
TM9SF1-211ENST00000531406 A6NNZ2 444 aa13.06□□□□□ -0.32
TM9SF1-211ENST00000531406 F8VZ95 297 aa13.06□□□□□ -0.32
TM9SF1-211ENST00000531406 FFAR2O15552 330 aa13.06□□□□□ -0.32
TM9SF1-211ENST00000531406 PIAS2O75928 621 aa13.06□□□□□ -0.32
TM9SF1-211ENST00000531406 MT-CO3P00414 261 aa13.06□□□□□ -0.32
TM9SF1-211ENST00000531406 MMEP08473 750 aa13.06□□□□□ -0.32
TM9SF1-211ENST00000531406 GIMD1P0DJR0 217 aa13.06□□□□□ -0.32
TM9SF1-211ENST00000531406 ITGB7P26010 798 aa13.06□□□□□ -0.32
TM9SF1-211ENST00000531406 NEK3P51956 506 aa13.06□□□□□ -0.32
TM9SF1-211ENST00000531406 RPS21P63220 83 aaKnown RBP13.06□□□□□ -0.32
TM9SF1-211ENST00000531406 NOMO3P69849 1222 aa13.06□□□□□ -0.32
TM9SF1-211ENST00000531406 ARF5P84085 180 aa13.06□□□□□ -0.32
TM9SF1-211ENST00000531406 DAB2P98082 770 aa13.06□□□□□ -0.32
TM9SF1-211ENST00000531406 HS1BP3Q53T59 392 aa13.06□□□□□ -0.32
TM9SF1-211ENST00000531406 CARD16Q5EG05 197 aa13.06□□□□□ -0.32
TM9SF1-211ENST00000531406 NAA35Q5VZE5 725 aa13.06□□□□□ -0.32
TM9SF1-211ENST00000531406 Q6ZSR6 202 aa13.06□□□□□ -0.32
TM9SF1-211ENST00000531406 DCP2Q8IU60 420 aaKnown RBP13.06□□□□□ -0.32
TM9SF1-211ENST00000531406 SLC22A18ASQ8N1D0 253 aa13.06□□□□□ -0.32
TM9SF1-211ENST00000531406 FAM174AQ8TBP5 190 aa13.06□□□□□ -0.32
TM9SF1-211ENST00000531406 IFT43Q96FT9 208 aa13.06□□□□□ -0.32
TM9SF1-211ENST00000531406 BMFQ96LC9 184 aa13.06□□□□□ -0.32
TM9SF1-211ENST00000531406 HEPHQ9BQS7 1158 aa13.06□□□□□ -0.32
TM9SF1-211ENST00000531406 SLC17A9Q9BYT1 436 aa13.06□□□□□ -0.32
TM9SF1-211ENST00000531406 SAMSN1Q9NSI8 373 aaKnown RBP13.06□□□□□ -0.32
TM9SF1-211ENST00000531406 PPARGC1AQ9UBK2 798 aaKnown RBP13.06□□□□□ -0.32
TM9SF1-211ENST00000531406 HS3ST3A1Q9Y663 406 aa13.06□□□□□ -0.32
TM9SF1-211ENST00000531406 GOLGA6L3A6NEY3 463 aa13.05□□□□□ -0.32
TM9SF1-211ENST00000531406 POM121BA6NF01 834 aa13.05□□□□□ -0.32
TM9SF1-211ENST00000531406 RRP8O43159 456 aaKnown RBP13.05□□□□□ -0.32
TM9SF1-211ENST00000531406 BRINP1O60477 761 aa13.05□□□□□ -0.32
TM9SF1-211ENST00000531406 CD160O95971 181 aa13.05□□□□□ -0.32
TM9SF1-211ENST00000531406 CKMT1AP12532 417 aa13.05□□□□□ -0.32
TM9SF1-211ENST00000531406 ADRB3P13945 408 aa13.05□□□□□ -0.32
TM9SF1-211ENST00000531406 L1CAMP32004 1257 aa13.05□□□□□ -0.32
TM9SF1-211ENST00000531406 ACVRL1P37023 503 aa13.05□□□□□ -0.32
TM9SF1-211ENST00000531406 CCNHP51946 323 aaPredicted RBP13.05□□□□□ -0.32
TM9SF1-211ENST00000531406 TPM4P67936 248 aa13.05□□□□□ -0.32
TM9SF1-211ENST00000531406 ATP11AP98196 1134 aa13.05□□□□□ -0.32
TM9SF1-211ENST00000531406 FGL2Q14314 439 aa13.05□□□□□ -0.32
TM9SF1-211ENST00000531406 GSE1Q14687 1217 aa13.05□□□□□ -0.32
TM9SF1-211ENST00000531406 RAB6CQ53S08 254 aa13.05□□□□□ -0.32
TM9SF1-211ENST00000531406 ZNF542PQ5EBM4 170 aa13.05□□□□□ -0.32
TM9SF1-211ENST00000531406 KIAA1161Q6NSJ0 714 aa13.05□□□□□ -0.32
TM9SF1-211ENST00000531406 LRRC69Q6ZNQ3 347 aa13.05□□□□□ -0.32
TM9SF1-211ENST00000531406 TMC6Q7Z403 805 aa13.05□□□□□ -0.32
TM9SF1-211ENST00000531406 EMC1Q8N766 993 aa13.05□□□□□ -0.32
TM9SF1-211ENST00000531406 SNIP1Q8TAD8 396 aaKnown RBP13.05□□□□□ -0.32
TM9SF1-211ENST00000531406 EPS8L1Q8TE68 723 aa13.05□□□□□ -0.32
TM9SF1-211ENST00000531406 SLC20A1Q8WUM9 679 aa13.05□□□□□ -0.32
TM9SF1-211ENST00000531406 FEM1CQ96JP0 617 aa13.05□□□□□ -0.32
TM9SF1-211ENST00000531406 RAB6CQ9H0N0 254 aa13.05□□□□□ -0.32
TM9SF1-211ENST00000531406 METTL5Q9NRN9 209 aaKnown RBP13.05□□□□□ -0.32
TM9SF1-211ENST00000531406 DNAJC28Q9NX36 388 aa13.05□□□□□ -0.32
TM9SF1-211ENST00000531406 NOCTQ9UK39 431 aaKnown RBP13.05□□□□□ -0.32
TM9SF1-211ENST00000531406 FCF1Q9Y324 198 aaKnown RBP13.05□□□□□ -0.32
TM9SF1-211ENST00000531406 FADS3Q9Y5Q0 445 aa13.05□□□□□ -0.32
TM9SF1-211ENST00000531406 ACTL7AQ9Y615 435 aa13.05□□□□□ -0.32
TM9SF1-211ENST00000531406 FASNP49327 2511 aaKnown RBP13.05□□□□□ -0.32
TM9SF1-211ENST00000531406 CXorf51AA0A1B0GTR3 108 aa13.04□□□□□ -0.32
TM9SF1-211ENST00000531406 SCAMP1O15126 338 aa13.04□□□□□ -0.32
TM9SF1-211ENST00000531406 RAD51BO15315 384 aa13.04□□□□□ -0.32
TM9SF1-211ENST00000531406 AP1G1O43747 822 aa13.04□□□□□ -0.32
TM9SF1-211ENST00000531406 OPA1O60313 960 aa13.04□□□□□ -0.32
TM9SF1-211ENST00000531406 PAK4O96013 591 aaPredicted RBP13.04□□□□□ -0.32
TM9SF1-211ENST00000531406 ALPPL2P10696 532 aa13.04□□□□□ -0.32
TM9SF1-211ENST00000531406 MYF5P13349 255 aa13.04□□□□□ -0.32
TM9SF1-211ENST00000531406 MMP8P22894 467 aa13.04□□□□□ -0.32
TM9SF1-211ENST00000531406 EEF1GP26641 437 aaKnown RBP13.04□□□□□ -0.32
TM9SF1-211ENST00000531406 ADRA1BP35368 520 aa13.04□□□□□ -0.32
TM9SF1-211ENST00000531406 ZNF165P49910 485 aa13.04□□□□□ -0.32
TM9SF1-211ENST00000531406 NRG1Q02297 640 aaPredicted RBP13.04□□□□□ -0.32
TM9SF1-211ENST00000531406 FZD2Q14332 565 aa13.04□□□□□ -0.32
TM9SF1-211ENST00000531406 TCP11X2Q5H9J9 407 aa13.04□□□□□ -0.32
TM9SF1-211ENST00000531406 MANEALQ5VSG8 457 aa13.04□□□□□ -0.32
TM9SF1-211ENST00000531406 KYAT3Q6YP21 454 aaKnown RBP13.04□□□□□ -0.32
TM9SF1-211ENST00000531406 KDM7AQ6ZMT4 941 aa13.04□□□□□ -0.32
TM9SF1-211ENST00000531406 PARS2Q7L3T8 475 aaKnown RBP13.04□□□□□ -0.32
TM9SF1-211ENST00000531406 PTAR1Q7Z6K3 402 aaPredicted RBP13.04□□□□□ -0.32
TM9SF1-211ENST00000531406 PHLDB2Q86SQ0 1253 aa13.04□□□□□ -0.32
TM9SF1-211ENST00000531406 ZNF677Q86XU0 584 aa13.04□□□□□ -0.32
TM9SF1-211ENST00000531406 PLPP6Q8IY26 295 aa13.04□□□□□ -0.32
TM9SF1-211ENST00000531406 RXFP2Q8WXD0 754 aa13.04□□□□□ -0.32
TM9SF1-211ENST00000531406 BAP1Q92560 729 aa13.04□□□□□ -0.32
TM9SF1-211ENST00000531406 FGF11Q92914 225 aa13.04□□□□□ -0.32
TM9SF1-211ENST00000531406 ISG20Q96AZ6 181 aaKnown RBP13.04□□□□□ -0.32
TM9SF1-211ENST00000531406 APOLD1Q96LR9 279 aa13.04□□□□□ -0.32
TM9SF1-211ENST00000531406 BPIFA3Q9BQP9 254 aa13.04□□□□□ -0.32
TM9SF1-211ENST00000531406 C1QTNF2Q9BXJ5 285 aa13.04□□□□□ -0.32
TM9SF1-211ENST00000531406 GANQ9H2C0 597 aa13.04□□□□□ -0.32
TM9SF1-211ENST00000531406 PRORYQ9H606 182 aa13.04□□□□□ -0.32
TM9SF1-211ENST00000531406 ZDHHC6Q9H6R6 413 aa13.04□□□□□ -0.32
TM9SF1-211ENST00000531406 GPR27Q9NS67 375 aa13.04□□□□□ -0.32
TM9SF1-211ENST00000531406 TAB2Q9NYJ8 693 aa13.04□□□□□ -0.32
TM9SF1-211ENST00000531406 NLGN3Q9NZ94 848 aa13.04□□□□□ -0.32
TM9SF1-211ENST00000531406 HECAQ9UBI9 543 aaPredicted RBP13.04□□□□□ -0.32
TM9SF1-211ENST00000531406 OR12D3Q9UGF7 316 aa13.04□□□□□ -0.32
TM9SF1-211ENST00000531406 RAI2Q9Y5P3 530 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms