RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 NUDT18Q6ZVK8 323 aa19.35■□□□□ 0.69
SMPD1-205ENST00000531303 SH2D3CQ8N5H7 860 aa19.35■□□□□ 0.69
SMPD1-205ENST00000531303 UCMAQ8WVF2 138 aa19.35■□□□□ 0.69
SMPD1-205ENST00000531303 TM6SF2Q9BZW4 377 aa19.35■□□□□ 0.69
SMPD1-205ENST00000531303 RAB17Q9H0T7 212 aa19.35■□□□□ 0.69
SMPD1-205ENST00000531303 TNKS2Q9H2K2 1166 aa19.35■□□□□ 0.69
SMPD1-205ENST00000531303 GLOD4Q9HC38 313 aa19.35■□□□□ 0.69
SMPD1-205ENST00000531303 EPB41L5Q9HCM4 733 aa19.35■□□□□ 0.69
SMPD1-205ENST00000531303 RAB6BQ9NRW1 208 aa19.35■□□□□ 0.69
SMPD1-205ENST00000531303 HS3ST2Q9Y278 367 aa19.35■□□□□ 0.69
SMPD1-205ENST00000531303 NNMTP40261 264 aa19.35■□□□□ 0.69
SMPD1-205ENST00000531303 RGRP47804 291 aa19.35■□□□□ 0.69
SMPD1-205ENST00000531303 ST8SIA6P61647 398 aa19.35■□□□□ 0.69
SMPD1-205ENST00000531303 DSC2Q02487 901 aa19.35■□□□□ 0.69
SMPD1-205ENST00000531303 EIF4HQ15056 248 aaKnown RBP19.35■□□□□ 0.69
SMPD1-205ENST00000531303 DLG2Q15700 870 aa19.35■□□□□ 0.69
SMPD1-205ENST00000531303 PTPRNQ16849 979 aa19.35■□□□□ 0.69
SMPD1-205ENST00000531303 DGKKQ5KSL6 1271 aa19.35■□□□□ 0.69
SMPD1-205ENST00000531303 ATXN7L2Q5T6C5 722 aaPredicted RBP19.35■□□□□ 0.69
SMPD1-205ENST00000531303 ZNF366Q8N895 744 aa19.35■□□□□ 0.69
SMPD1-205ENST00000531303 MRGPRX3Q96LB0 322 aa19.35■□□□□ 0.69
SMPD1-205ENST00000531303 NECAB3Q96P71 396 aaPredicted RBP19.35■□□□□ 0.69
SMPD1-205ENST00000531303 ETNK1Q9HBU6 452 aa19.35■□□□□ 0.69
SMPD1-205ENST00000531303 UBP1Q9NZI7 540 aa19.35■□□□□ 0.69
SMPD1-205ENST00000531303 LHX3Q9UBR4 397 aa19.35■□□□□ 0.69
SMPD1-205ENST00000531303 FBXL21Q9UKT6 434 aa19.35■□□□□ 0.69
SMPD1-205ENST00000531303 ATP8A1Q9Y2Q0 1164 aa19.35■□□□□ 0.69
SMPD1-205ENST00000531303 TTC34A8MYJ7 566 aa19.34■□□□□ 0.69
SMPD1-205ENST00000531303 EGFP01133 1207 aa19.34■□□□□ 0.69
SMPD1-205ENST00000531303 RPL21P46778 160 aaKnown RBP19.34■□□□□ 0.69
SMPD1-205ENST00000531303 SCNN1BP51168 640 aa19.34■□□□□ 0.69
SMPD1-205ENST00000531303 GRSF1Q12849 480 aaKnown RBP eCLIP19.34■□□□□ 0.69
SMPD1-205ENST00000531303 MLF2Q15773 248 aaPredicted RBP19.34■□□□□ 0.69
SMPD1-205ENST00000531303 PARP6Q2NL67 630 aa19.34■□□□□ 0.69
SMPD1-205ENST00000531303 DUPD1Q68J44 220 aa19.34■□□□□ 0.69
SMPD1-205ENST00000531303 FSTL4Q6MZW2 842 aa19.34■□□□□ 0.69
SMPD1-205ENST00000531303 RYBPQ8N488 228 aaPredicted RBP19.34■□□□□ 0.69
SMPD1-205ENST00000531303 SPATA22Q8NHS9 363 aa19.34■□□□□ 0.69
SMPD1-205ENST00000531303 CCHCR1Q8TD31 782 aa19.34■□□□□ 0.69
SMPD1-205ENST00000531303 CASKIN2Q8WXE0 1202 aa19.34■□□□□ 0.69
SMPD1-205ENST00000531303 FAM3CQ92520 227 aa19.34■□□□□ 0.69
SMPD1-205ENST00000531303 EXOC4Q96A65 974 aa19.34■□□□□ 0.69
SMPD1-205ENST00000531303 LRRC45Q96CN5 670 aa19.34■□□□□ 0.69
SMPD1-205ENST00000531303 ERLEC1Q96DZ1 483 aa19.34■□□□□ 0.69
SMPD1-205ENST00000531303 PSKH2Q96QS6 385 aa19.34■□□□□ 0.69
SMPD1-205ENST00000531303 SEMA3CQ99985 751 aa19.34■□□□□ 0.69
SMPD1-205ENST00000531303 GBA3Q9H227 469 aa19.34■□□□□ 0.69
SMPD1-205ENST00000531303 MTG2Q9H4K7 406 aa19.34■□□□□ 0.69
SMPD1-205ENST00000531303 NDRG2Q9UN36 371 aaKnown RBP19.34■□□□□ 0.69
SMPD1-205ENST00000531303 K7EQS6 105 aa19.33■□□□□ 0.68
SMPD1-205ENST00000531303 SRPRAP08240 638 aaKnown RBP19.33■□□□□ 0.68
SMPD1-205ENST00000531303 GLULP15104 373 aa19.33■□□□□ 0.68
SMPD1-205ENST00000531303 TUBB4BP68371 445 aa19.33■□□□□ 0.68
SMPD1-205ENST00000531303 NIPAL4Q0D2K0 466 aa19.33■□□□□ 0.68
SMPD1-205ENST00000531303 ZNF234Q14588 700 aa19.33■□□□□ 0.68
SMPD1-205ENST00000531303 IZUMO3Q5VZ72 239 aa19.33■□□□□ 0.68
SMPD1-205ENST00000531303 EGFLAMQ63HQ2 1017 aa19.33■□□□□ 0.68
SMPD1-205ENST00000531303 C22orf39Q6P5X5 142 aa19.33■□□□□ 0.68
SMPD1-205ENST00000531303 SUGP1Q8IWZ8 645 aaKnown RBP19.33■□□□□ 0.68
SMPD1-205ENST00000531303 GJD3Q8N144 294 aa19.33■□□□□ 0.68
SMPD1-205ENST00000531303 OR6K2Q8NGY2 324 aa19.33■□□□□ 0.68
SMPD1-205ENST00000531303 IFT81Q8WYA0 676 aa19.33■□□□□ 0.68
SMPD1-205ENST00000531303 EZH1Q92800 747 aaPredicted RBP19.33■□□□□ 0.68
SMPD1-205ENST00000531303 RBM15Q96T37 977 aaKnown RBP eCLIP19.33■□□□□ 0.68
SMPD1-205ENST00000531303 POLR1EQ9GZS1 481 aaKnown RBP19.33■□□□□ 0.68
SMPD1-205ENST00000531303 CD320Q9NPF0 282 aa19.33■□□□□ 0.68
SMPD1-205ENST00000531303 HAUS2Q9NVX0 235 aa19.33■□□□□ 0.68
SMPD1-205ENST00000531303 MUTYHQ9UIF7 546 aa19.33■□□□□ 0.68
SMPD1-205ENST00000531303 HCN2Q9UL51 889 aa19.33■□□□□ 0.68
SMPD1-205ENST00000531303 E7EVH7 732 aa19.32■□□□□ 0.68
SMPD1-205ENST00000531303 HLA-EP13747 358 aa19.32■□□□□ 0.68
SMPD1-205ENST00000531303 IVDP26440 423 aa19.32■□□□□ 0.68
SMPD1-205ENST00000531303 TIE1P35590 1138 aa19.32■□□□□ 0.68
SMPD1-205ENST00000531303 CD86P42081 329 aa19.32■□□□□ 0.68
SMPD1-205ENST00000531303 WASP42768 502 aa19.32■□□□□ 0.68
SMPD1-205ENST00000531303 TNFRSF4P43489 277 aa19.32■□□□□ 0.68
SMPD1-205ENST00000531303 LMAN1P49257 510 aa19.32■□□□□ 0.68
SMPD1-205ENST00000531303 PRPSAP1Q14558 356 aa19.32■□□□□ 0.68
SMPD1-205ENST00000531303 TMEM196Q5HYL7 178 aa19.32■□□□□ 0.68
SMPD1-205ENST00000531303 C4orf22Q6V702 233 aa19.32■□□□□ 0.68
SMPD1-205ENST00000531303 Q6ZVU0 165 aa19.32■□□□□ 0.68
SMPD1-205ENST00000531303 SNF8Q96H20 258 aa19.32■□□□□ 0.68
SMPD1-205ENST00000531303 MYO19Q96H55 970 aa19.32■□□□□ 0.68
SMPD1-205ENST00000531303 ACOX2Q99424 681 aa19.32■□□□□ 0.68
SMPD1-205ENST00000531303 MGME1Q9BQP7 344 aa19.32■□□□□ 0.68
SMPD1-205ENST00000531303 ANKZF1Q9H8Y5 726 aa19.32■□□□□ 0.68
SMPD1-205ENST00000531303 SCUBE2Q9NQ36 999 aa19.32■□□□□ 0.68
SMPD1-205ENST00000531303 CACNA2D2Q9NY47 1150 aa19.32■□□□□ 0.68
SMPD1-205ENST00000531303 SLC8A2Q9UPR5 921 aa19.32■□□□□ 0.68
SMPD1-205ENST00000531303 ANKRD36A6QL64 1941 aa19.32■□□□□ 0.68
SMPD1-205ENST00000531303 SHISA7A6NL88 538 aa19.31■□□□□ 0.68
SMPD1-205ENST00000531303 WASH3PC4AMC7 463 aa19.31■□□□□ 0.68
SMPD1-205ENST00000531303 INSIG1O15503 277 aa19.31■□□□□ 0.68
SMPD1-205ENST00000531303 ATP9BO43861 1147 aa19.31■□□□□ 0.68
SMPD1-205ENST00000531303 ZNF821O75541 412 aaPredicted RBP19.31■□□□□ 0.68
SMPD1-205ENST00000531303 MT-CYBP00156 380 aaPredicted RBP19.31■□□□□ 0.68
SMPD1-205ENST00000531303 FDFT1P37268 417 aa19.31■□□□□ 0.68
SMPD1-205ENST00000531303 HSPA9P38646 679 aaKnown RBP19.31■□□□□ 0.68
SMPD1-205ENST00000531303 SPARCL1Q14515 664 aa19.31■□□□□ 0.68
SMPD1-205ENST00000531303 C2orf27AQ580R0 203 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms