RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 CHD5Q8TDI0 1954 aa8.43□□□□□ -1.06
CD44-232ENST00000531118 A0A087X0B3 334 aa8.43□□□□□ -1.06
CD44-232ENST00000531118 A0A1W2PQM1 296 aa8.43□□□□□ -1.06
CD44-232ENST00000531118 POM121BA6NF01 834 aa8.43□□□□□ -1.06
CD44-232ENST00000531118 YJEFN3A6XGL0 299 aa8.43□□□□□ -1.06
CD44-232ENST00000531118 E7ENQ6 273 aa8.43□□□□□ -1.06
CD44-232ENST00000531118 AGRPO00253 132 aa8.43□□□□□ -1.06
CD44-232ENST00000531118 TULP2O00295 520 aa8.43□□□□□ -1.06
CD44-232ENST00000531118 EXOC3O60645 756 aa8.43□□□□□ -1.06
CD44-232ENST00000531118 HLA-DRAP01903 254 aa8.43□□□□□ -1.06
CD44-232ENST00000531118 RPN1P04843 607 aaKnown RBP8.43□□□□□ -1.06
CD44-232ENST00000531118 KRT7P08729 469 aa8.43□□□□□ -1.06
CD44-232ENST00000531118 GJB2P29033 226 aa8.43□□□□□ -1.06
CD44-232ENST00000531118 NNMTP40261 264 aa8.43□□□□□ -1.06
CD44-232ENST00000531118 MAPK10P53779 464 aa8.43□□□□□ -1.06
CD44-232ENST00000531118 SNRPFP62306 86 aaKnown RBP8.43□□□□□ -1.06
CD44-232ENST00000531118 EIF2B5Q13144 721 aaKnown RBP8.43□□□□□ -1.06
CD44-232ENST00000531118 PDE1CQ14123 709 aaPredicted RBP8.43□□□□□ -1.06
CD44-232ENST00000531118 FGL2Q14314 439 aa8.43□□□□□ -1.06
CD44-232ENST00000531118 LACTB2Q53H82 288 aaPredicted RBP8.43□□□□□ -1.06
CD44-232ENST00000531118 MS4A13Q5J8X5 152 aa8.43□□□□□ -1.06
CD44-232ENST00000531118 CAPRIN2Q6IMN6 1127 aaKnown RBP8.43□□□□□ -1.06
CD44-232ENST00000531118 NEK5Q6P3R8 708 aa8.43□□□□□ -1.06
CD44-232ENST00000531118 CCDC73Q6ZRK6 1079 aa8.43□□□□□ -1.06
CD44-232ENST00000531118 ARL10Q8N8L6 244 aa8.43□□□□□ -1.06
CD44-232ENST00000531118 ZNF507Q8TCN5 953 aa8.43□□□□□ -1.06
CD44-232ENST00000531118 JPH3Q8WXH2 748 aaPredicted RBP8.43□□□□□ -1.06
CD44-232ENST00000531118 USP7Q93009 1102 aa8.43□□□□□ -1.06
CD44-232ENST00000531118 BMFQ96LC9 184 aa8.43□□□□□ -1.06
CD44-232ENST00000531118 TMEM74Q96NL1 305 aa8.43□□□□□ -1.06
CD44-232ENST00000531118 BACH2Q9BYV9 841 aa8.43□□□□□ -1.06
CD44-232ENST00000531118 CPEB1Q9BZB8 566 aaKnown RBP8.43□□□□□ -1.06
CD44-232ENST00000531118 UBXN6Q9BZV1 441 aa8.43□□□□□ -1.06
CD44-232ENST00000531118 CYP3A43Q9HB55 503 aa8.43□□□□□ -1.06
CD44-232ENST00000531118 SPASTQ9UBP0 616 aa8.43□□□□□ -1.06
CD44-232ENST00000531118 FBXO2Q9UK22 296 aaPredicted RBP8.43□□□□□ -1.06
CD44-232ENST00000531118 PPM1HQ9ULR3 514 aa8.43□□□□□ -1.06
CD44-232ENST00000531118 PADI4Q9UM07 663 aa8.43□□□□□ -1.06
CD44-232ENST00000531118 PCNX1Q96RV3 2341 aa8.43□□□□□ -1.06
CD44-232ENST00000531118 STMND1H3BQB6 276 aa8.42□□□□□ -1.06
CD44-232ENST00000531118 H3BQV1 296 aa8.42□□□□□ -1.06
CD44-232ENST00000531118 RAD51BO15315 384 aa8.42□□□□□ -1.06
CD44-232ENST00000531118 GCATO75600 419 aa8.42□□□□□ -1.06
CD44-232ENST00000531118 CTSLP07711 333 aa8.42□□□□□ -1.06
CD44-232ENST00000531118 ANXA6P08133 673 aa8.42□□□□□ -1.06
CD44-232ENST00000531118 LIFP15018 202 aa8.42□□□□□ -1.06
CD44-232ENST00000531118 PDGFRAP16234 1089 aa8.42□□□□□ -1.06
CD44-232ENST00000531118 GNLYP22749 145 aa8.42□□□□□ -1.06
CD44-232ENST00000531118 COL8A1P27658 744 aa8.42□□□□□ -1.06
CD44-232ENST00000531118 RABIFP47224 123 aa8.42□□□□□ -1.06
CD44-232ENST00000531118 MLLT10P55197 1068 aa8.42□□□□□ -1.06
CD44-232ENST00000531118 TBX4P57082 545 aa8.42□□□□□ -1.06
CD44-232ENST00000531118 DLG4P78352 724 aa8.42□□□□□ -1.06
CD44-232ENST00000531118 CCL7P80098 99 aa8.42□□□□□ -1.06
CD44-232ENST00000531118 SULT2A1Q06520 285 aa8.42□□□□□ -1.06
CD44-232ENST00000531118 KLRB1Q12918 225 aa8.42□□□□□ -1.06
CD44-232ENST00000531118 C1orf61Q13536 156 aa8.42□□□□□ -1.06
CD44-232ENST00000531118 GOLGA7BQ2TAP0 167 aa8.42□□□□□ -1.06
CD44-232ENST00000531118 ZNF394Q53GI3 561 aa8.42□□□□□ -1.06
CD44-232ENST00000531118 DCAF6Q58WW2 860 aa8.42□□□□□ -1.06
CD44-232ENST00000531118 BSPRYQ5W0U4 402 aa8.42□□□□□ -1.06
CD44-232ENST00000531118 ARHGAP17Q68EM7 881 aa8.42□□□□□ -1.06
CD44-232ENST00000531118 ESRP1Q6NXG1 681 aaKnown RBP8.42□□□□□ -1.06
CD44-232ENST00000531118 UNC45BQ8IWX7 931 aa8.42□□□□□ -1.06
CD44-232ENST00000531118 PHACTR4Q8IZ21 702 aa8.42□□□□□ -1.06
CD44-232ENST00000531118 CFAP52Q8N1V2 620 aa8.42□□□□□ -1.06
CD44-232ENST00000531118 FCRL2Q96LA5 508 aaPredicted RBP8.42□□□□□ -1.06
CD44-232ENST00000531118 TBATAQ96M53 351 aa8.42□□□□□ -1.06
CD44-232ENST00000531118 CLIC6Q96NY7 704 aa8.42□□□□□ -1.06
CD44-232ENST00000531118 IPO9Q96P70 1041 aaKnown RBP8.42□□□□□ -1.06
CD44-232ENST00000531118 DDX50Q9BQ39 737 aaKnown RBP8.42□□□□□ -1.06
CD44-232ENST00000531118 SRRTQ9BXP5 876 aaKnown RBP8.42□□□□□ -1.06
CD44-232ENST00000531118 IMPG2Q9BZV3 1241 aa8.42□□□□□ -1.06
CD44-232ENST00000531118 ABCC13Q9NSE7 274 aa8.42□□□□□ -1.06
CD44-232ENST00000531118 GMPR2Q9P2T1 348 aaKnown RBP8.42□□□□□ -1.06
CD44-232ENST00000531118 HS3ST3A1Q9Y663 406 aa8.42□□□□□ -1.06
CD44-232ENST00000531118 ARHGEF17Q96PE2 2063 aaPredicted RBP8.42□□□□□ -1.06
CD44-232ENST00000531118 ANKRD36A6QL64 1941 aa8.41□□□□□ -1.06
CD44-232ENST00000531118 VPS37CA5D8V6 355 aaPredicted RBP8.41□□□□□ -1.06
CD44-232ENST00000531118 PRR19A6NJB7 356 aa8.41□□□□□ -1.06
CD44-232ENST00000531118 ZNF891A8MT65 544 aaPredicted RBP8.41□□□□□ -1.06
CD44-232ENST00000531118 LMO7DNF2Z398 122 aa8.41□□□□□ -1.06
CD44-232ENST00000531118 KPNA3O00505 521 aaPredicted RBP8.41□□□□□ -1.06
CD44-232ENST00000531118 XPO1O14980 1071 aaKnown RBP8.41□□□□□ -1.06
CD44-232ENST00000531118 MCF2LO15068 1137 aa8.41□□□□□ -1.06
CD44-232ENST00000531118 SEMA7AO75326 666 aa8.41□□□□□ -1.06
CD44-232ENST00000531118 PCDH8O95206 1070 aa8.41□□□□□ -1.06
CD44-232ENST00000531118 MOCS2O96007 188 aaPredicted RBP8.41□□□□□ -1.06
CD44-232ENST00000531118 PRKCGP05129 697 aa8.41□□□□□ -1.06
CD44-232ENST00000531118 CELA2BP08218 269 aaPredicted RBP8.41□□□□□ -1.06
CD44-232ENST00000531118 GPC1P35052 558 aa8.41□□□□□ -1.06
CD44-232ENST00000531118 NOS2P35228 1153 aa8.41□□□□□ -1.06
CD44-232ENST00000531118 ADKP55263 362 aaKnown RBP8.41□□□□□ -1.06
CD44-232ENST00000531118 SLC8A3P57103 927 aa8.41□□□□□ -1.06
CD44-232ENST00000531118 DAOAP59103 153 aa8.41□□□□□ -1.06
CD44-232ENST00000531118 PRRT3Q5FWE3 981 aa8.41□□□□□ -1.06
CD44-232ENST00000531118 KIAA1161Q6NSJ0 714 aa8.41□□□□□ -1.06
CD44-232ENST00000531118 SV2AQ7L0J3 742 aa8.41□□□□□ -1.06
CD44-232ENST00000531118 MAMDC2Q7Z304 686 aaPredicted RBP8.41□□□□□ -1.06
CD44-232ENST00000531118 CIR1Q86X95 450 aaPredicted RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms