RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 GSRP00390 522 aa12.08□□□□□ -0.48
LTBP3-219ENST00000530990 MARCKSL1P49006 195 aa12.08□□□□□ -0.48
LTBP3-219ENST00000530990 RHOAP61586 193 aa12.08□□□□□ -0.48
LTBP3-219ENST00000530990 ZNF33AQ06730 810 aa12.08□□□□□ -0.48
LTBP3-219ENST00000530990 INO80DQ53TQ3 878 aaPredicted RBP12.08□□□□□ -0.48
LTBP3-219ENST00000530990 ATXN7L2Q5T6C5 722 aaPredicted RBP12.08□□□□□ -0.48
LTBP3-219ENST00000530990 LYSMD4Q5XG99 296 aa12.08□□□□□ -0.48
LTBP3-219ENST00000530990 DAAM2Q86T65 1068 aa12.08□□□□□ -0.48
LTBP3-219ENST00000530990 MAP7D3Q8IWC1 876 aa12.08□□□□□ -0.48
LTBP3-219ENST00000530990 HDDC3Q8N4P3 179 aa12.08□□□□□ -0.48
LTBP3-219ENST00000530990 PQLC3Q8N755 202 aa12.08□□□□□ -0.48
LTBP3-219ENST00000530990 OR2AP1Q8NGE2 309 aa12.08□□□□□ -0.48
LTBP3-219ENST00000530990 CASKIN2Q8WXE0 1202 aa12.08□□□□□ -0.48
LTBP3-219ENST00000530990 EXOC2Q96KP1 924 aa12.08□□□□□ -0.48
LTBP3-219ENST00000530990 OMDQ99983 421 aa12.08□□□□□ -0.48
LTBP3-219ENST00000530990 BTBD1Q9H0C5 482 aa12.08□□□□□ -0.48
LTBP3-219ENST00000530990 NEUROG2Q9H2A3 272 aa12.08□□□□□ -0.48
LTBP3-219ENST00000530990 SMOC1Q9H4F8 434 aa12.08□□□□□ -0.48
LTBP3-219ENST00000530990 C6orf106Q9H6K1 298 aaPredicted RBP12.08□□□□□ -0.48
LTBP3-219ENST00000530990 ZDHHC6Q9H6R6 413 aa12.08□□□□□ -0.48
LTBP3-219ENST00000530990 LHX3Q9UBR4 397 aa12.08□□□□□ -0.48
LTBP3-219ENST00000530990 IPO11Q9UI26 975 aaKnown RBP12.08□□□□□ -0.48
LTBP3-219ENST00000530990 FZD4Q9ULV1 537 aa12.08□□□□□ -0.48
LTBP3-219ENST00000530990 PCDHGA5Q9Y5G8 931 aa12.08□□□□□ -0.48
LTBP3-219ENST00000530990 FAM186AA6NE01 2351 aa12.08□□□□□ -0.48
LTBP3-219ENST00000530990 PCDH15Q96QU1 1955 aa12.07□□□□□ -0.48
LTBP3-219ENST00000530990 PI4KAP42356 2102 aa12.07□□□□□ -0.48
LTBP3-219ENST00000530990 MACROD2A1Z1Q3 448 aa12.07□□□□□ -0.48
LTBP3-219ENST00000530990 GRID2IPA4D2P6 1211 aa12.07□□□□□ -0.48
LTBP3-219ENST00000530990 MEI4A8MW99 385 aa12.07□□□□□ -0.48
LTBP3-219ENST00000530990 KPNA3O00505 521 aaPredicted RBP12.07□□□□□ -0.48
LTBP3-219ENST00000530990 LEFTY1O75610 366 aa12.07□□□□□ -0.48
LTBP3-219ENST00000530990 MAP3K6O95382 1288 aa12.07□□□□□ -0.48
LTBP3-219ENST00000530990 SEMA4FO95754 770 aa12.07□□□□□ -0.48
LTBP3-219ENST00000530990 IGSF6O95976 241 aa12.07□□□□□ -0.48
LTBP3-219ENST00000530990 PRNPP04156 253 aa12.07□□□□□ -0.48
LTBP3-219ENST00000530990 ITPKAP23677 461 aa12.07□□□□□ -0.48
LTBP3-219ENST00000530990 GKP32189 559 aa12.07□□□□□ -0.48
LTBP3-219ENST00000530990 ADPRHP54922 357 aa12.07□□□□□ -0.48
LTBP3-219ENST00000530990 NAP1L1P55209 391 aaKnown RBP12.07□□□□□ -0.48
LTBP3-219ENST00000530990 SNRPD1P62314 119 aaKnown RBP12.07□□□□□ -0.48
LTBP3-219ENST00000530990 CCZ1BP86790 482 aa12.07□□□□□ -0.48
LTBP3-219ENST00000530990 CCZ1P86791 482 aaPredicted RBP12.07□□□□□ -0.48
LTBP3-219ENST00000530990 IL10RBQ08334 325 aa12.07□□□□□ -0.48
LTBP3-219ENST00000530990 PAFAH1B3Q15102 231 aaKnown RBP12.07□□□□□ -0.48
LTBP3-219ENST00000530990 CYTH1Q15438 398 aa12.07□□□□□ -0.48
LTBP3-219ENST00000530990 ARSIQ5FYB1 569 aa12.07□□□□□ -0.48
LTBP3-219ENST00000530990 SPDYCQ5MJ68 293 aa12.07□□□□□ -0.48
LTBP3-219ENST00000530990 AGBL4Q5VU57 503 aa12.07□□□□□ -0.48
LTBP3-219ENST00000530990 FAM46CQ5VWP2 391 aa12.07□□□□□ -0.48
LTBP3-219ENST00000530990 LRRC8AQ8IWT6 810 aa12.07□□□□□ -0.48
LTBP3-219ENST00000530990 RYBPQ8N488 228 aaPredicted RBP12.07□□□□□ -0.48
LTBP3-219ENST00000530990 ATPAF2Q8N5M1 289 aa12.07□□□□□ -0.48
LTBP3-219ENST00000530990 CCDC112Q8NEF3 446 aa12.07□□□□□ -0.48
LTBP3-219ENST00000530990 TMIEQ8NEW7 156 aa12.07□□□□□ -0.48
LTBP3-219ENST00000530990 PIGKQ92643 395 aa12.07□□□□□ -0.48
LTBP3-219ENST00000530990 KRT35Q92764 455 aa12.07□□□□□ -0.48
LTBP3-219ENST00000530990 FAM131CQ96AQ9 280 aa12.07□□□□□ -0.48
LTBP3-219ENST00000530990 VOPP1Q96AW1 172 aa12.07□□□□□ -0.48
LTBP3-219ENST00000530990 ARRDC3Q96B67 414 aa12.07□□□□□ -0.48
LTBP3-219ENST00000530990 RNF25Q96BH1 459 aaPredicted RBP12.07□□□□□ -0.48
LTBP3-219ENST00000530990 ZNF419Q96HQ0 510 aaPredicted RBP12.07□□□□□ -0.48
LTBP3-219ENST00000530990 GDAP1L1Q96MZ0 367 aa12.07□□□□□ -0.48
LTBP3-219ENST00000530990 HEPHQ9BQS7 1158 aa12.07□□□□□ -0.48
LTBP3-219ENST00000530990 SGK2Q9HBY8 427 aa12.07□□□□□ -0.48
LTBP3-219ENST00000530990 DDX56Q9NY93 547 aaKnown RBP12.07□□□□□ -0.48
LTBP3-219ENST00000530990 HECAQ9UBI9 543 aaPredicted RBP12.07□□□□□ -0.48
LTBP3-219ENST00000530990 NCKAP1Q9Y2A7 1128 aa12.07□□□□□ -0.48
LTBP3-219ENST00000530990 ADGRG1Q9Y653 693 aa12.07□□□□□ -0.48
LTBP3-219ENST00000530990 FAM47DPA6NHR8 397 aa12.06□□□□□ -0.48
LTBP3-219ENST00000530990 ZNF487B1APH4 448 aa12.06□□□□□ -0.48
LTBP3-219ENST00000530990 KRIT1O00522 736 aa12.06□□□□□ -0.48
LTBP3-219ENST00000530990 ARHGAP6O43182 974 aa12.06□□□□□ -0.48
LTBP3-219ENST00000530990 MAFKO60675 156 aa12.06□□□□□ -0.48
LTBP3-219ENST00000530990 PALMO75781 387 aa12.06□□□□□ -0.48
LTBP3-219ENST00000530990 PEX11BO96011 259 aa12.06□□□□□ -0.48
LTBP3-219ENST00000530990 TGM1P22735 817 aa12.06□□□□□ -0.48
LTBP3-219ENST00000530990 RGRP47804 291 aa12.06□□□□□ -0.48
LTBP3-219ENST00000530990 GBE1Q04446 702 aa12.06□□□□□ -0.48
LTBP3-219ENST00000530990 GALNT2Q10471 571 aa12.06□□□□□ -0.48
LTBP3-219ENST00000530990 KIF5AQ12840 1032 aa12.06□□□□□ -0.48
LTBP3-219ENST00000530990 CNTN1Q12860 1018 aa12.06□□□□□ -0.48
LTBP3-219ENST00000530990 SFSWAPQ12872 951 aaKnown RBP12.06□□□□□ -0.48
LTBP3-219ENST00000530990 PLA2G2CQ5R387 149 aa12.06□□□□□ -0.48
LTBP3-219ENST00000530990 TMCO4Q5TGY1 634 aa12.06□□□□□ -0.48
LTBP3-219ENST00000530990 DCAF12L1Q5VU92 463 aa12.06□□□□□ -0.48
LTBP3-219ENST00000530990 PEAR1Q5VY43 1037 aaPredicted RBP12.06□□□□□ -0.48
LTBP3-219ENST00000530990 TCEAL6Q6IPX3 200 aa12.06□□□□□ -0.48
LTBP3-219ENST00000530990 NCEH1Q6PIU2 408 aa12.06□□□□□ -0.48
LTBP3-219ENST00000530990 MFSD7Q6UXD7 560 aa12.06□□□□□ -0.48
LTBP3-219ENST00000530990 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.06□□□□□ -0.48
LTBP3-219ENST00000530990 VSIG1Q86XK7 387 aa12.06□□□□□ -0.48
LTBP3-219ENST00000530990 PLPP6Q8IY26 295 aa12.06□□□□□ -0.48
LTBP3-219ENST00000530990 TXLNBQ8N3L3 684 aa12.06□□□□□ -0.48
LTBP3-219ENST00000530990 PLD5Q8N7P1 536 aa12.06□□□□□ -0.48
LTBP3-219ENST00000530990 LRRC57Q8N9N7 239 aa12.06□□□□□ -0.48
LTBP3-219ENST00000530990 CADM4Q8NFZ8 388 aa12.06□□□□□ -0.48
LTBP3-219ENST00000530990 SNX19Q92543 992 aa12.06□□□□□ -0.48
LTBP3-219ENST00000530990 FOXJ1Q92949 421 aa12.06□□□□□ -0.48
LTBP3-219ENST00000530990 TCEAL3Q969E4 200 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms