RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 FAM50BQ9Y247 325 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 MYRFQ9Y2G1 1151 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 C2CD2Q9Y426 696 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 DISP2A7MBM2 1401 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 EFCAB10A6NFE3 127 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 KCNK1O00180 336 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 PAICSP22234 425 aaKnown RBP8.58□□□□□ -1.04
CTNND1-227ENST00000530748 CES1P23141 567 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 GRM5P41594 1212 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 TTPAP49638 278 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 CASP5P51878 434 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 MAP2K5Q13163 448 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 INSCQ1MX18 579 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 TRIQKQ629K1 86 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 ZNF621Q6ZSS3 439 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 ANKRD52Q8NB46 1076 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 HAS1Q92839 578 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 SNRNP25Q9BV90 132 aaKnown RBP8.58□□□□□ -1.04
CTNND1-227ENST00000530748 ROBO3Q96MS0 1386 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 ZSCAN5CA6NGD5 496 aaPredicted RBP8.57□□□□□ -1.04
CTNND1-227ENST00000530748 QSOX1O00391 747 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 KPNA3O00505 521 aaPredicted RBP8.57□□□□□ -1.04
CTNND1-227ENST00000530748 TSPAN19P0C672 248 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 ZSCAN5DPP0CG00 497 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 LBPP18428 481 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 CACNA2D1P54289 1103 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 IL17AQ16552 155 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 DGUOKQ16854 277 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 USP41Q3LFD5 358 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 CDC73Q6P1J9 531 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 ZNF549Q6P9A3 640 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 AGMOQ6ZNB7 445 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 ST13P5Q8NFI4 369 aaPredicted RBP8.57□□□□□ -1.04
CTNND1-227ENST00000530748 GRIN3AQ8TCU5 1115 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 SPRTNQ9H040 489 aaPredicted RBP8.57□□□□□ -1.04
CTNND1-227ENST00000530748 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.57□□□□□ -1.043e-6■■□□□ 12.8
CTNND1-227ENST00000530748 MTF2Q9Y483 593 aaPredicted RBP8.57□□□□□ -1.04
CTNND1-227ENST00000530748 ACTL7BQ9Y614 415 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 ANKRD26Q9UPS8 1709 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 FAM237AA0A1B0GTK4 181 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 SMIM31A0A1B0GVY4 71 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 PHGDHO43175 533 aaKnown RBP8.57□□□□□ -1.04
CTNND1-227ENST00000530748 PIGNO95427 931 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 NFKB1P19838 968 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 PDZK1Q5T2W1 519 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 NEK10Q6ZWH5 1172 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 COMMD2Q86X83 199 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 SLC9A9Q8IVB4 645 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 NMD3Q96D46 503 aaKnown RBP8.57□□□□□ -1.04
CTNND1-227ENST00000530748 MBOAT7Q96N66 472 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 MCCC1Q96RQ3 725 aaPredicted RBP8.57□□□□□ -1.04
CTNND1-227ENST00000530748 CDRT15Q96T59 188 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 CCDC167Q9P0B6 97 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 ANAPC2Q9UJX6 822 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 VPS4AQ9UN37 437 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 MRPL42Q9Y6G3 142 aaKnown RBP8.57□□□□□ -1.04
CTNND1-227ENST00000530748 CENPXA8MT69 81 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 CALCAP01258 141 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 ASGR1P07306 291 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 CSH1P0DML2 217 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 CSH2P0DML3 217 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 CTSEP14091 401 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 TLX1P31314 330 aaPredicted RBP8.57□□□□□ -1.04
CTNND1-227ENST00000530748 CRATP43155 626 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 TTMPQ5BVD1 217 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 RAET1GQ6H3X3 334 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 CACTIN-AS1Q8N1I8 211 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 ZFP28Q8NHY6 868 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 BSNDQ8WZ55 320 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 NACC2Q96BF6 587 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 CERS2Q96G23 380 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 RNF157Q96PX1 679 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 OXCT2Q9BYC2 517 aaPredicted RBP8.57□□□□□ -1.04
CTNND1-227ENST00000530748 SORCS3Q9UPU3 1222 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 GPSM3Q9Y4H4 160 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 PTCH2Q9Y6C5 1203 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.57□□□□□ -1.04
CTNND1-227ENST00000530748 NUDT14O95848 222 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 BCL10O95999 233 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 ABL2P42684 1182 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 RHBDL3P58872 404 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 RAB10P61026 200 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 TCEA2Q15560 299 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 ZNHIT3Q15649 155 aaPredicted RBP8.57□□□□□ -1.04
CTNND1-227ENST00000530748 RNF43Q68DV7 783 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 ADHFE1Q8IWW8 467 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 KIAA0319LQ8IZA0 1049 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 POMGNT2Q8NAT1 580 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 MOSPD2Q8NHP6 518 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 RNFT2Q96EX2 444 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 FAIM2Q9BWQ8 316 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 CDT1Q9H211 546 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 ASB8Q9H765 288 aa8.57□□□□□ -1.04
CTNND1-227ENST00000530748 H3BN98 237 aa8.56□□□□□ -1.04
CTNND1-227ENST00000530748 UMPSP11172 480 aa8.56□□□□□ -1.04
CTNND1-227ENST00000530748 RPL3P39023 403 aaKnown RBP8.56□□□□□ -1.04
CTNND1-227ENST00000530748 PFKFB4Q16877 469 aa8.56□□□□□ -1.04
CTNND1-227ENST00000530748 NEPROQ6NW34 567 aa8.56□□□□□ -1.04
CTNND1-227ENST00000530748 ZNF662Q6ZS27 426 aa8.56□□□□□ -1.04
CTNND1-227ENST00000530748 C16orf62Q7Z3J2 963 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms