RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 NSMCE1Q8WV22 266 aa4.93□□□□□ -1.62
C11orf88-204ENST00000529661 SLC25A28Q96A46 364 aa4.93□□□□□ -1.62
C11orf88-204ENST00000529661 PIMREGQ9BSJ6 248 aa4.93□□□□□ -1.62
C11orf88-204ENST00000529661 WACQ9BTA9 647 aa4.93□□□□□ -1.62
C11orf88-204ENST00000529661 LMAN2LQ9H0V9 348 aa4.93□□□□□ -1.62
C11orf88-204ENST00000529661 EBF3Q9H4W6 596 aa4.93□□□□□ -1.62
C11orf88-204ENST00000529661 THSD1Q9NS62 852 aa4.93□□□□□ -1.62
C11orf88-204ENST00000529661 ZBTB40Q9NUA8 1239 aa4.93□□□□□ -1.62
C11orf88-204ENST00000529661 TMEM248Q9NWD8 314 aa4.93□□□□□ -1.62
C11orf88-204ENST00000529661 ZDHHC7Q9NXF8 308 aa4.93□□□□□ -1.62
C11orf88-204ENST00000529661 TAS2R10Q9NYW0 307 aa4.93□□□□□ -1.62
C11orf88-204ENST00000529661 SLC25A13Q9UJS0 675 aa4.93□□□□□ -1.62
C11orf88-204ENST00000529661 AGO2Q9UKV8 859 aaKnown RBP4.93□□□□□ -1.62
C11orf88-204ENST00000529661 OSGIN2Q9Y236 505 aa4.93□□□□□ -1.62
C11orf88-204ENST00000529661 SLC45A1Q9Y2W3 748 aa4.93□□□□□ -1.62
C11orf88-204ENST00000529661 IGLV5-39A0A0G2JS06 123 aa4.92□□□□□ -1.62
C11orf88-204ENST00000529661 A0A1W2PQM1 296 aa4.92□□□□□ -1.62
C11orf88-204ENST00000529661 B4DGG1 531 aa4.92□□□□□ -1.62
C11orf88-204ENST00000529661 KCNJ18B7U540 433 aa4.92□□□□□ -1.62
C11orf88-204ENST00000529661 K7ENM7 598 aa4.92□□□□□ -1.62
C11orf88-204ENST00000529661 SYN3O14994 580 aa4.92□□□□□ -1.62
C11orf88-204ENST00000529661 PRPF4O43172 522 aaKnown RBP eCLIP4.92□□□□□ -1.62
C11orf88-204ENST00000529661 TLX3O43711 291 aaPredicted RBP4.92□□□□□ -1.62
C11orf88-204ENST00000529661 CCNT1O60563 726 aaKnown RBP4.92□□□□□ -1.62
C11orf88-204ENST00000529661 NFATC1O95644 943 aa4.92□□□□□ -1.62
C11orf88-204ENST00000529661 SYF2O95926 243 aaKnown RBP4.92□□□□□ -1.62
C11orf88-204ENST00000529661 HLA-DQA2P01906 255 aa4.92□□□□□ -1.62
C11orf88-204ENST00000529661 CHRM4P08173 479 aa4.92□□□□□ -1.62
C11orf88-204ENST00000529661 PSMA4P25789 261 aaKnown RBP4.92□□□□□ -1.62
C11orf88-204ENST00000529661 GSTM2P28161 218 aa4.92□□□□□ -1.62
C11orf88-204ENST00000529661 LINC00205P59089 165 aa4.92□□□□□ -1.62
C11orf88-204ENST00000529661 PRKG2Q13237 762 aa4.92□□□□□ -1.62
C11orf88-204ENST00000529661 PDE1CQ14123 709 aaPredicted RBP4.92□□□□□ -1.62
C11orf88-204ENST00000529661 ERV3-1Q14264 604 aa4.92□□□□□ -1.62
C11orf88-204ENST00000529661 TWIST1Q15672 202 aa4.92□□□□□ -1.62
C11orf88-204ENST00000529661 SLC18A3Q16572 532 aa4.92□□□□□ -1.62
C11orf88-204ENST00000529661 SMTNL2Q2TAL5 461 aa4.92□□□□□ -1.62
C11orf88-204ENST00000529661 LEXMQ3ZCV2 418 aa4.92□□□□□ -1.62
C11orf88-204ENST00000529661 GXYLT1Q4G148 440 aa4.92□□□□□ -1.62
C11orf88-204ENST00000529661 VWA5B1Q5TIE3 1220 aa4.92□□□□□ -1.62
C11orf88-204ENST00000529661 AADACL2Q6P093 401 aa4.92□□□□□ -1.62
C11orf88-204ENST00000529661 SLC30A9Q6PML9 568 aa4.92□□□□□ -1.62
C11orf88-204ENST00000529661 SLC22A25Q6T423 547 aa4.92□□□□□ -1.62
C11orf88-204ENST00000529661 PAQR4Q8N4S7 273 aaPredicted RBP4.92□□□□□ -1.62
C11orf88-204ENST00000529661 SETD9Q8NE22 299 aa4.92□□□□□ -1.62
C11orf88-204ENST00000529661 OR52N4Q8NGI2 321 aa4.92□□□□□ -1.62
C11orf88-204ENST00000529661 RAB40AQ8WXH6 277 aa4.92□□□□□ -1.62
C11orf88-204ENST00000529661 CNOT9Q92600 299 aaKnown RBP4.92□□□□□ -1.62
C11orf88-204ENST00000529661 EME1Q96AY2 570 aa4.92□□□□□ -1.62
C11orf88-204ENST00000529661 NR1H4Q96RI1 486 aaPredicted RBP4.92□□□□□ -1.62
C11orf88-204ENST00000529661 EYA3Q99504 573 aa4.92□□□□□ -1.62
C11orf88-204ENST00000529661 BARD1Q99728 777 aaKnown RBP4.92□□□□□ -1.62
C11orf88-204ENST00000529661 FAM234AQ9H0X4 552 aa4.92□□□□□ -1.62
C11orf88-204ENST00000529661 VEZTQ9HBM0 779 aa4.92□□□□□ -1.62
C11orf88-204ENST00000529661 DECR2Q9NUI1 292 aa4.92□□□□□ -1.62
C11orf88-204ENST00000529661 LAS1LQ9Y4W2 734 aaKnown RBP4.92□□□□□ -1.62
C11orf88-204ENST00000529661 ZNF335Q9H4Z2 1342 aaPredicted RBP4.92□□□□□ -1.62
C11orf88-204ENST00000529661 KIR2DS5A0A0G2JLQ3 304 aa4.91□□□□□ -1.62
C11orf88-204ENST00000529661 TMEM272A0A1B0GTI8 110 aa4.91□□□□□ -1.62
C11orf88-204ENST00000529661 A6NCN8 305 aa4.91□□□□□ -1.62
C11orf88-204ENST00000529661 FAM90A10PA6NDY2 464 aa4.91□□□□□ -1.62
C11orf88-204ENST00000529661 CD8B2A6NJW9 211 aa4.91□□□□□ -1.62
C11orf88-204ENST00000529661 ZNF814B7Z6K7 855 aa4.91□□□□□ -1.62
C11orf88-204ENST00000529661 KIR2DS3K7RE56 304 aa4.91□□□□□ -1.62
C11orf88-204ENST00000529661 RHODO00212 210 aa4.91□□□□□ -1.62
C11orf88-204ENST00000529661 TNFSF14O43557 240 aa4.91□□□□□ -1.62
C11orf88-204ENST00000529661 DOK2O60496 412 aa4.91□□□□□ -1.62
C11orf88-204ENST00000529661 ZC3H11AO75152 810 aaKnown RBP eCLIP4.91□□□□□ -1.62
C11orf88-204ENST00000529661 GFPT2O94808 682 aa4.91□□□□□ -1.62
C11orf88-204ENST00000529661 HSPA1AP0DMV8 641 aaKnown RBP4.91□□□□□ -1.62
C11orf88-204ENST00000529661 HSPA1BP0DMV9 641 aaKnown RBP4.91□□□□□ -1.62
C11orf88-204ENST00000529661 SNHG28P0DPA3 235 aa4.91□□□□□ -1.62
C11orf88-204ENST00000529661 TYK2P29597 1187 aa4.91□□□□□ -1.62
C11orf88-204ENST00000529661 ALDH7A1P49419 539 aaKnown RBP4.91□□□□□ -1.62
C11orf88-204ENST00000529661 CLNS1AP54105 237 aaKnown RBP4.91□□□□□ -1.62
C11orf88-204ENST00000529661 UFM1P61960 85 aa4.91□□□□□ -1.62
C11orf88-204ENST00000529661 GAD2Q05329 585 aa4.91□□□□□ -1.62
C11orf88-204ENST00000529661 ZBTB16Q05516 673 aa4.91□□□□□ -1.62
C11orf88-204ENST00000529661 IL13RA2Q14627 380 aa4.91□□□□□ -1.62
C11orf88-204ENST00000529661 INPP5JQ15735 1006 aaPredicted RBP4.91□□□□□ -1.62
C11orf88-204ENST00000529661 AP5B1Q2VPB7 878 aa4.91□□□□□ -1.62
C11orf88-204ENST00000529661 PRTGQ2VWP7 1150 aa4.91□□□□□ -1.62
C11orf88-204ENST00000529661 PLK5Q496M5 336 aa4.91□□□□□ -1.62
C11orf88-204ENST00000529661 ITPRIPL1Q6GPH6 555 aa4.91□□□□□ -1.62
C11orf88-204ENST00000529661 ATF7IPQ6VMQ6 1270 aa4.91□□□□□ -1.62
C11orf88-204ENST00000529661 FASTKD5Q7L8L6 764 aaKnown RBP4.91□□□□□ -1.62
C11orf88-204ENST00000529661 RNF144BQ7Z419 303 aa4.91□□□□□ -1.62
C11orf88-204ENST00000529661 MON1AQ86VX9 555 aa4.91□□□□□ -1.62
C11orf88-204ENST00000529661 DDIASQ8IXT1 998 aa4.91□□□□□ -1.62
C11orf88-204ENST00000529661 ADAD1Q96M93 576 aaKnown RBP4.91□□□□□ -1.62
C11orf88-204ENST00000529661 LBHD1Q9BQE6 289 aaPredicted RBP4.91□□□□□ -1.62
C11orf88-204ENST00000529661 TTYH1Q9H313 450 aaPredicted RBP4.91□□□□□ -1.62
C11orf88-204ENST00000529661 EPHX3Q9H6B9 360 aa4.91□□□□□ -1.62
C11orf88-204ENST00000529661 ARL15Q9NXU5 204 aa4.91□□□□□ -1.62
C11orf88-204ENST00000529661 KCND2Q9NZV8 630 aa4.91□□□□□ -1.62
C11orf88-204ENST00000529661 BCCIPQ9P287 314 aaKnown RBP eCLIP4.91□□□□□ -1.62
C11orf88-204ENST00000529661 CAMK2AQ9UQM7 478 aa4.91□□□□□ -1.62
C11orf88-204ENST00000529661 PSAT1Q9Y617 370 aa4.91□□□□□ -1.62
C11orf88-204ENST00000529661 RSF1Q96T23 1441 aaPredicted RBP4.9□□□□□ -1.62
C11orf88-204ENST00000529661 A0A0G2JK05 382 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms