RNA–Protein interactions for RNA: ENST00000529307.1

CAPRIN1-207, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAPRIN1, Length 2,266 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-207ENST00000529307 SPARCL1Q14515 664 aa16.99■□□□□ 0.31
CAPRIN1-207ENST00000529307 TEX44Q53QW1 395 aa16.99■□□□□ 0.31
CAPRIN1-207ENST00000529307 DDX53Q86TM3 631 aaKnown RBP16.99■□□□□ 0.31
CAPRIN1-207ENST00000529307 PRPF39Q86UA1 669 aaKnown RBP16.99■□□□□ 0.31
CAPRIN1-207ENST00000529307 CNTD1Q8N815 330 aa16.99■□□□□ 0.31
CAPRIN1-207ENST00000529307 RTL3Q8N8U3 475 aaKnown RBP16.99■□□□□ 0.31
CAPRIN1-207ENST00000529307 DHRS4Q9BTZ2 278 aa16.99■□□□□ 0.31
CAPRIN1-207ENST00000529307 IL23AQ9NPF7 189 aa16.99■□□□□ 0.31
CAPRIN1-207ENST00000529307 EIF2B3Q9NR50 452 aaKnown RBP16.99■□□□□ 0.31
CAPRIN1-207ENST00000529307 ATP9BO43861 1147 aa16.98■□□□□ 0.31
CAPRIN1-207ENST00000529307 EFCAB14O75071 495 aa16.98■□□□□ 0.31
CAPRIN1-207ENST00000529307 DCTN3O75935 186 aa16.98■□□□□ 0.31
CAPRIN1-207ENST00000529307 JCHAINP01591 159 aa16.98■□□□□ 0.31
CAPRIN1-207ENST00000529307 APOEP02649 317 aa16.98■□□□□ 0.31
CAPRIN1-207ENST00000529307 PTPN4P29074 926 aa16.98■□□□□ 0.31
CAPRIN1-207ENST00000529307 ATP5DP30049 168 aa16.98■□□□□ 0.31
CAPRIN1-207ENST00000529307 KCNQ1P51787 676 aa16.98■□□□□ 0.31
CAPRIN1-207ENST00000529307 GEMIN4P57678 1058 aaKnown RBP16.98■□□□□ 0.31
CAPRIN1-207ENST00000529307 MPP2Q14168 576 aa16.98■□□□□ 0.31
CAPRIN1-207ENST00000529307 ALFQ53S48 1182 aa16.98■□□□□ 0.31
CAPRIN1-207ENST00000529307 SPATA24Q86W54 205 aa16.98■□□□□ 0.31
CAPRIN1-207ENST00000529307 RIBC1Q8N443 379 aaPredicted RBP16.98■□□□□ 0.31
CAPRIN1-207ENST00000529307 IGSF8Q969P0 613 aa16.98■□□□□ 0.31
CAPRIN1-207ENST00000529307 ZNF212Q9UDV6 495 aa16.98■□□□□ 0.31
CAPRIN1-207ENST00000529307 ZC3H7BQ9UGR2 993 aaKnown RBP16.98■□□□□ 0.31
CAPRIN1-207ENST00000529307 ITGB1BP2Q9UKP3 347 aa16.98■□□□□ 0.31
CAPRIN1-207ENST00000529307 TTLL3Q9Y4R7 772 aa16.98■□□□□ 0.31
CAPRIN1-207ENST00000529307 YIPF1Q9Y548 306 aa16.98■□□□□ 0.31
CAPRIN1-207ENST00000529307 USH1CQ9Y6N9 552 aa16.98■□□□□ 0.31
CAPRIN1-207ENST00000529307 SHROOM3Q8TF72 1996 aa16.98■□□□□ 0.31
CAPRIN1-207ENST00000529307 hCG_2014768A0A024R1R8 64 aa16.98■□□□□ 0.31
CAPRIN1-207ENST00000529307 ZNF840PA6NDX5 716 aa16.98■□□□□ 0.31
CAPRIN1-207ENST00000529307 MAFKO60675 156 aa16.98■□□□□ 0.31
CAPRIN1-207ENST00000529307 HNRNPCL1O60812 293 aaKnown RBP16.98■□□□□ 0.31
CAPRIN1-207ENST00000529307 BAIAP3O94812 1187 aa16.98■□□□□ 0.31
CAPRIN1-207ENST00000529307 GJB5O95377 273 aa16.98■□□□□ 0.31
CAPRIN1-207ENST00000529307 ZCCHC18P0CG32 403 aa16.98■□□□□ 0.31
CAPRIN1-207ENST00000529307 T-ENOLP0DO92 83 aa16.98■□□□□ 0.31
CAPRIN1-207ENST00000529307 RAP1GAP2Q684P5 730 aa16.98■□□□□ 0.31
CAPRIN1-207ENST00000529307 TPGS2Q68CL5 300 aa16.98■□□□□ 0.31
CAPRIN1-207ENST00000529307 NADSYN1Q6IA69 706 aa16.98■□□□□ 0.31
CAPRIN1-207ENST00000529307 FBXL22Q6P050 247 aa16.98■□□□□ 0.31
CAPRIN1-207ENST00000529307 SRRM1Q8IYB3 904 aaKnown RBP16.98■□□□□ 0.31
CAPRIN1-207ENST00000529307 BTN2A3PQ96KV6 586 aa16.98■□□□□ 0.31
CAPRIN1-207ENST00000529307 TSGA13Q96PP4 275 aa16.98■□□□□ 0.31
CAPRIN1-207ENST00000529307 PAFAH2Q99487 392 aa16.98■□□□□ 0.31
CAPRIN1-207ENST00000529307 MLPHQ9BV36 600 aaPredicted RBP16.98■□□□□ 0.31
CAPRIN1-207ENST00000529307 TMEM106CQ9BVX2 250 aa16.98■□□□□ 0.31
CAPRIN1-207ENST00000529307 XAB2Q9HCS7 855 aaKnown RBP16.98■□□□□ 0.31
CAPRIN1-207ENST00000529307 SLC24A2Q9UI40 661 aa16.98■□□□□ 0.31
CAPRIN1-207ENST00000529307 CHKBQ9Y259 395 aa16.98■□□□□ 0.31
CAPRIN1-207ENST00000529307 WASH4PA8MWX3 477 aa16.97■□□□□ 0.31
CAPRIN1-207ENST00000529307 ETS2P15036 469 aa16.97■□□□□ 0.31
CAPRIN1-207ENST00000529307 NFKB1P19838 968 aa16.97■□□□□ 0.31
CAPRIN1-207ENST00000529307 PSMD7P51665 324 aa16.97■□□□□ 0.31
CAPRIN1-207ENST00000529307 CRADDP78560 199 aa16.97■□□□□ 0.31
CAPRIN1-207ENST00000529307 CDK16Q00536 496 aa16.97■□□□□ 0.31
CAPRIN1-207ENST00000529307 RAB33AQ14088 237 aa16.97■□□□□ 0.31
CAPRIN1-207ENST00000529307 LRRC8BQ6P9F7 803 aa16.97■□□□□ 0.31
CAPRIN1-207ENST00000529307 UNC5AQ6ZN44 842 aa16.97■□□□□ 0.31
CAPRIN1-207ENST00000529307 TFAP2DQ7Z6R9 452 aa16.97■□□□□ 0.31
CAPRIN1-207ENST00000529307 ATP6V0D2Q8N8Y2 350 aa16.97■□□□□ 0.31
CAPRIN1-207ENST00000529307 USP33Q8TEY7 942 aa16.97■□□□□ 0.31
CAPRIN1-207ENST00000529307 TEKT5Q96M29 485 aa16.97■□□□□ 0.31
CAPRIN1-207ENST00000529307 CEP295NLQ96MC4 621 aa16.97■□□□□ 0.31
CAPRIN1-207ENST00000529307 ZNF512Q96ME7 567 aaPredicted RBP16.97■□□□□ 0.31
CAPRIN1-207ENST00000529307 EBNA1BP2Q99848 306 aaKnown RBP16.97■□□□□ 0.31
CAPRIN1-207ENST00000529307 DDX50Q9BQ39 737 aaKnown RBP16.97■□□□□ 0.31
CAPRIN1-207ENST00000529307 GBA3Q9H227 469 aa16.97■□□□□ 0.31
CAPRIN1-207ENST00000529307 STX18Q9P2W9 335 aaKnown RBP16.97■□□□□ 0.31
CAPRIN1-207ENST00000529307 LNPEPQ9UIQ6 1025 aa16.97■□□□□ 0.31
CAPRIN1-207ENST00000529307 IGLV3-10A0A075B6K4 115 aa16.96■□□□□ 0.31
CAPRIN1-207ENST00000529307 MTSS1O43312 755 aa16.96■□□□□ 0.31
CAPRIN1-207ENST00000529307 URODP06132 367 aa16.96■□□□□ 0.31
CAPRIN1-207ENST00000529307 CCNCP24863 283 aa16.96■□□□□ 0.31
CAPRIN1-207ENST00000529307 UBE2Q1Q7Z7E8 422 aa16.96■□□□□ 0.31
CAPRIN1-207ENST00000529307 TRABD2AQ86V40 505 aa16.96■□□□□ 0.31
CAPRIN1-207ENST00000529307 ST13P4Q8IZP2 240 aaPredicted RBP16.96■□□□□ 0.31
CAPRIN1-207ENST00000529307 ATPAF2Q8N5M1 289 aa16.96■□□□□ 0.31
CAPRIN1-207ENST00000529307 LZTR1Q8N653 840 aa16.96■□□□□ 0.31
CAPRIN1-207ENST00000529307 DCAKDQ8WVC6 231 aa16.96■□□□□ 0.31
CAPRIN1-207ENST00000529307 LRRC39Q96DD0 335 aa16.96■□□□□ 0.31
CAPRIN1-207ENST00000529307 TUBGCP5Q96RT8 1024 aa16.96■□□□□ 0.31
CAPRIN1-207ENST00000529307 PITPNM3Q9BZ71 974 aa16.96■□□□□ 0.31
CAPRIN1-207ENST00000529307 CXXC1Q9P0U4 656 aaPredicted RBP16.96■□□□□ 0.31
CAPRIN1-207ENST00000529307 PSMC3IPQ9P2W1 217 aaPredicted RBP16.96■□□□□ 0.31
CAPRIN1-207ENST00000529307 FETUBQ9UGM5 382 aa16.96■□□□□ 0.31
CAPRIN1-207ENST00000529307 TMEM98Q9Y2Y6 226 aa16.96■□□□□ 0.31
CAPRIN1-207ENST00000529307 MAD1L1Q9Y6D9 718 aa16.96■□□□□ 0.31
CAPRIN1-207ENST00000529307 ZBBXA8MT70 800 aa16.96■□□□□ 0.31
CAPRIN1-207ENST00000529307 RASA4BC9J798 803 aa16.96■□□□□ 0.31
CAPRIN1-207ENST00000529307 RASA4O43374 803 aa16.96■□□□□ 0.31
CAPRIN1-207ENST00000529307 LILRB3O75022 631 aa16.96■□□□□ 0.31
CAPRIN1-207ENST00000529307 USP12O75317 370 aa16.96■□□□□ 0.31
CAPRIN1-207ENST00000529307 MLNP12872 115 aa16.96■□□□□ 0.31
CAPRIN1-207ENST00000529307 STX2P32856 288 aa16.96■□□□□ 0.31
CAPRIN1-207ENST00000529307 CD97P48960 835 aa16.96■□□□□ 0.31
CAPRIN1-207ENST00000529307 RING1Q06587 406 aa16.96■□□□□ 0.31
CAPRIN1-207ENST00000529307 RASA2Q15283 850 aa16.96■□□□□ 0.31
CAPRIN1-207ENST00000529307 KLHL38Q2WGJ6 581 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms