RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 CDK9P50750 372 aaKnown RBP7.32□□□□□ -1.24
CTNND1-216ENST00000527467 HTRA3P83110 453 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 MYBPC1Q00872 1141 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 PRKAA1Q13131 559 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 IL18Q14116 193 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 GTF2IRD2BQ6EKJ0 949 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 CYP2R1Q6VVX0 501 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 OTOP1Q7RTM1 612 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 GTF2IRD2Q86UP8 949 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 TDRPQ86YL5 185 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 FAM126BQ8IXS8 530 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 ZZZ3Q8IYH5 903 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 METTL6Q8TCB7 284 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 TMEM237Q96Q45 408 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 MED15Q96RN5 788 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 FAM49AQ9H0Q0 323 aaPredicted RBP7.32□□□□□ -1.24
CTNND1-216ENST00000527467 RNPEPL1Q9HAU8 725 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 MKLN1Q9UL63 735 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 MRPS17Q9Y2R5 130 aaKnown RBP7.32□□□□□ -1.24
CTNND1-216ENST00000527467 PTCH2Q9Y6C5 1203 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 PRAMEF33A0A0G2JMD5 474 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 KANTRA0A1W2PQU2 76 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 KCNK1O00180 336 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 MAGEB3O15480 346 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 TRAPPC3O43617 180 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 PRAMEF10O60809 474 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 TADA2AO75478 443 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 HIST1H2ABP04908 130 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 ARFIP1P53367 373 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 HLA-DQA1Q5Y7H0 255 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 CWF19L1Q69YN2 538 aaKnown RBP7.32□□□□□ -1.24
CTNND1-216ENST00000527467 TWF2Q6IBS0 349 aaKnown RBP7.32□□□□□ -1.24
CTNND1-216ENST00000527467 DENND5BQ6ZUT9 1274 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 HIST3H2AQ7L7L0 130 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 STARD8Q92502 1023 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 HIST1H2ACQ93077 130 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 GMCL1Q96IK5 515 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 KLHL5Q96PQ7 755 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 PIGSQ96S52 555 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 SEMA6AQ9H2E6 1030 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 TOR3AQ9H497 397 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 CYP3A43Q9HB55 503 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 PIH1D3Q9NQM4 214 aaKnown RBP7.32□□□□□ -1.24
CTNND1-216ENST00000527467 SAR1AQ9NR31 198 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 TMEM265A0A087WTH1 108 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 CCDC154A6NI56 674 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 BTBD19C9JJ37 291 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 FCHO1O14526 889 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 MID1O15344 667 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 CSN2P05814 226 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 PAX3P23760 479 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 PRCPP42785 496 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 RAB15P59190 212 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 NAA20P61599 178 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 STXBP1P61764 594 aaKnown RBP7.32□□□□□ -1.24
CTNND1-216ENST00000527467 ATP2C1P98194 919 aaPredicted RBP7.32□□□□□ -1.24
CTNND1-216ENST00000527467 MCL1Q07820 350 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 DPYDQ12882 1025 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 MTAPQ13126 283 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 FASTKQ14296 549 aaKnown RBP7.32□□□□□ -1.24
CTNND1-216ENST00000527467 KYAT1Q16773 422 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 KRT24Q2M2I5 525 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 INTS11Q5TA45 600 aaKnown RBP7.32□□□□□ -1.24
CTNND1-216ENST00000527467 HAGHLQ6PII5 290 aaPredicted RBP7.32□□□□□ -1.24
CTNND1-216ENST00000527467 DHX40Q8IX18 779 aaKnown RBP7.32□□□□□ -1.24
CTNND1-216ENST00000527467 OFCC1Q8IZS5 231 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 PDPRQ8NCN5 879 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 NEDD1Q8NHV4 660 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 STOML3Q8TAV4 291 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 DNAJA4Q8WW22 397 aaPredicted RBP7.32□□□□□ -1.24
CTNND1-216ENST00000527467 AIFM3Q96NN9 605 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 PLEKHF1Q96S99 279 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 NAT9Q9BTE0 207 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 MKNK1Q9BUB5 465 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 SLC25A23Q9BV35 468 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 ZNF471Q9BX82 626 aaPredicted RBP7.32□□□□□ -1.24
CTNND1-216ENST00000527467 DCLK3Q9C098 648 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 TMBIM4Q9HC24 238 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 GRHL1Q9NZI5 618 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 EIF3KQ9UBQ5 218 aaKnown RBP7.32□□□□□ -1.24
CTNND1-216ENST00000527467 CYTH4Q9UIA0 394 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 LNPEPQ9UIQ6 1025 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 IRGMA1A4Y4 181 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 C2orf81A6NN90 581 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 C2orf74A8MZ97 194 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 RGS14O43566 566 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 VPS4BO75351 444 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 NUDT14O95848 222 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 CD2P06729 351 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 PCNAP12004 261 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 CPB1P15086 417 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 ZNF12P17014 697 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 ZNF14P17017 642 aaPredicted RBP7.32□□□□□ -1.24
CTNND1-216ENST00000527467 TM4SF4P48230 202 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 CACNB2Q08289 660 aaPredicted RBP7.32□□□□□ -1.24
CTNND1-216ENST00000527467 ABRQ12979 859 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 NRF1Q16656 503 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 CA9Q16790 459 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 GARNL3Q5VVW2 1013 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 PLA2G4FQ68DD2 849 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms