RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 MRPL44Q9H9J2 332 aaKnown RBP3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 UCK1Q9HA47 277 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 MOV10Q9HCE1 1003 aaKnown RBP3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 PALMDQ9NP74 551 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 PPANQ9NQ55 473 aaKnown RBP3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 NMRK1Q9NWW6 199 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 UVRAGQ9P2Y5 699 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 ZNF70Q9UC06 446 aaPredicted RBP3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 NKX1-2Q9UD57 310 aaPredicted RBP3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 PCDHA12Q9UN75 941 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 TDRKHQ9Y2W6 561 aaKnown RBP3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 SPEF1Q9Y4P9 236 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 MYH1P12882 1939 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 MYH2Q9UKX2 1941 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 ABCC6O95255 1503 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 CASKIN1Q8WXD9 1431 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 MAP3K15Q6ZN16 1313 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 PCDH11XQ9BZA7 1347 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 FAM237AA0A1B0GTK4 181 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 A0A1W2PR48 441 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 ZSCAN5BA6NJL1 495 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 ZNF233A6NK53 670 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 A8MUI8 341 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 TRIM77I1YAP6 450 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 SLC9A3R1O14745 358 aaPredicted RBP3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 POLR1CO15160 346 aaPredicted RBP3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 KCNAB3O43448 404 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 AP1G1O43747 822 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 SCO2O43819 266 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 TLR2O60603 784 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 JRKO75564 520 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 TCEA3O75764 348 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 APBB3O95704 486 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 OAS1P00973 400 aaKnown RBP3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 SNRPAP09012 282 aaKnown RBP3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 TRIM27P14373 513 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 MYL6BP14649 208 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 HOXB6P17509 224 aaKnown RBP3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 POU3F3P20264 500 aaPredicted RBP3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 IFNAR2P48551 515 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 HSPA13P48723 471 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 RGS19P49795 217 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 ARHGDIBP52566 201 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 VAV2P52735 878 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 PROK1P58294 105 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 GNG2P59768 71 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 RPP38P78345 283 aaKnown RBP3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 KDSRQ06136 332 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 PTK2BQ14289 1009 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 KCNJ8Q15842 424 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 PKN2Q16513 984 aaKnown RBP3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 BMT2Q1RMZ1 405 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 FUT11Q495W5 492 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 TMEM63BQ5T3F8 832 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 ERMARDQ5T6L9 678 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 SLX4IPQ5VYV7 408 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 RWDD4Q6NW29 188 aaKnown RBP3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 C1orf228Q6PIY5 440 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 DCDC5Q6ZRR9 648 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 TMTC3Q6ZXV5 915 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 USP50Q70EL3 339 aaPredicted RBP3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 USP43Q70EL4 1123 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 MAEAQ7L5Y9 396 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 CATSPER4Q7RTX7 472 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 PEX26Q7Z412 305 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 KCTD20Q7Z5Y7 419 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 GPR141Q7Z602 305 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 TICAM1Q8IUC6 712 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 NELFCDQ8IXH7 590 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 ZZZ3Q8IYH5 903 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 ALLCQ8N6M5 410 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 EIF1ADQ8N9N8 165 aaKnown RBP3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 TC2NQ8N9U0 490 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 TERB1Q8NA31 727 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 PCYOX1LQ8NBM8 494 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 PJA1Q8NG27 643 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 CDC26Q8NHZ8 85 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 LRRC8CQ8TDW0 803 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 NOC3LQ8WTT2 800 aaKnown RBP3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 CHPT1Q8WUD6 406 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 NELFBQ8WX92 580 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 HSPH1Q92598 858 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 INPP5DQ92835 1189 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 CCDC51Q96ER9 411 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 C11orf24Q96F05 449 aaPredicted RBP3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 CDCA5Q96FF9 252 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 ARL5BQ96KC2 179 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 CFAP57Q96MR6 1250 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 COG8Q96MW5 612 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 OPALINQ96PE5 141 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 ZNF317Q96PQ6 595 aaPredicted RBP3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 NUDCD1Q96RS6 583 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 PLEKHF1Q96S99 279 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 COQ7Q99807 217 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 PSD2Q9BQI7 771 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 LRMDAQ9H2I8 198 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 ADNPQ9H2P0 1102 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 DPH5Q9H2P9 285 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 HAUS4Q9H6D7 363 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 SP140LQ9H930 580 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms