RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 KCNK3O14649 394 aa16.91■□□□□ 0.3
SMCO4-204ENST00000527149 AXIN1O15169 862 aa16.91■□□□□ 0.3
SMCO4-204ENST00000527149 ALDH1A2O94788 518 aa16.91■□□□□ 0.3
SMCO4-204ENST00000527149 ATP1A1P05023 1023 aaKnown RBP16.91■□□□□ 0.3
SMCO4-204ENST00000527149 CCNCP24863 283 aa16.91■□□□□ 0.3
SMCO4-204ENST00000527149 CCNHP51946 323 aaPredicted RBP16.91■□□□□ 0.3
SMCO4-204ENST00000527149 ZNF33AQ06730 810 aa16.91■□□□□ 0.3
SMCO4-204ENST00000527149 LBRQ14739 615 aaKnown RBP16.91■□□□□ 0.3
SMCO4-204ENST00000527149 PDK1Q15118 436 aa16.91■□□□□ 0.3
SMCO4-204ENST00000527149 ATXN7L2Q5T6C5 722 aaPredicted RBP16.91■□□□□ 0.3
SMCO4-204ENST00000527149 ZNF776Q68DI1 518 aaPredicted RBP16.91■□□□□ 0.3
SMCO4-204ENST00000527149 HEATR6Q6AI08 1181 aaKnown RBP16.91■□□□□ 0.3
SMCO4-204ENST00000527149 PGBD5Q8N414 524 aa16.91■□□□□ 0.3
SMCO4-204ENST00000527149 TSEN2Q8NCE0 465 aaKnown RBP16.91■□□□□ 0.3
SMCO4-204ENST00000527149 OR2AP1Q8NGE2 309 aa16.91■□□□□ 0.3
SMCO4-204ENST00000527149 ACTL9Q8TC94 416 aa16.91■□□□□ 0.3
SMCO4-204ENST00000527149 OR8D1Q8WZ84 308 aa16.91■□□□□ 0.3
SMCO4-204ENST00000527149 HAUS1Q96CS2 278 aa16.91■□□□□ 0.3
SMCO4-204ENST00000527149 EXOC2Q96KP1 924 aa16.91■□□□□ 0.3
SMCO4-204ENST00000527149 WDR24Q96S15 920 aa16.91■□□□□ 0.3
SMCO4-204ENST00000527149 PRRX2Q99811 253 aa16.91■□□□□ 0.3
SMCO4-204ENST00000527149 TPSD1Q9BZJ3 242 aa16.91■□□□□ 0.3
SMCO4-204ENST00000527149 USP36Q9P275 1121 aaKnown RBP16.91■□□□□ 0.3
SMCO4-204ENST00000527149 SARDHQ9UL12 918 aa16.91■□□□□ 0.3
SMCO4-204ENST00000527149 PPM1HQ9ULR3 514 aa16.91■□□□□ 0.3
SMCO4-204ENST00000527149 ABCA7Q8IZY2 2146 aa16.91■□□□□ 0.3
SMCO4-204ENST00000527149 OTOGLQ3ZCN5 2332 aa16.91■□□□□ 0.3
SMCO4-204ENST00000527149 MATN3O15232 486 aa16.9■□□□□ 0.3
SMCO4-204ENST00000527149 GJB3O75712 270 aa16.9■□□□□ 0.3
SMCO4-204ENST00000527149 CR2P20023 1033 aa16.9■□□□□ 0.3
SMCO4-204ENST00000527149 METAP1P53582 386 aa16.9■□□□□ 0.3
SMCO4-204ENST00000527149 RHOAP61586 193 aa16.9■□□□□ 0.3
SMCO4-204ENST00000527149 IFI35P80217 286 aaPredicted RBP16.9■□□□□ 0.3
SMCO4-204ENST00000527149 OTUD4Q01804 1114 aaKnown RBP16.9■□□□□ 0.3
SMCO4-204ENST00000527149 HNRNPDQ14103 355 aaKnown RBP16.9■□□□□ 0.3
SMCO4-204ENST00000527149 MAP7D1Q3KQU3 841 aa16.9■□□□□ 0.3
SMCO4-204ENST00000527149 HS1BP3Q53T59 392 aa16.9■□□□□ 0.3
SMCO4-204ENST00000527149 CARD16Q5EG05 197 aa16.9■□□□□ 0.3
SMCO4-204ENST00000527149 LONP2Q86WA8 852 aa16.9■□□□□ 0.3
SMCO4-204ENST00000527149 MMAAQ8IVH4 418 aaKnown RBP16.9■□□□□ 0.3
SMCO4-204ENST00000527149 CCDC13Q8IYE1 715 aa16.9■□□□□ 0.3
SMCO4-204ENST00000527149 FAM131CQ96AQ9 280 aa16.9■□□□□ 0.3
SMCO4-204ENST00000527149 SIPA1Q96FS4 1042 aa16.9■□□□□ 0.3
SMCO4-204ENST00000527149 NSMCE3Q96MG7 304 aa16.9■□□□□ 0.3
SMCO4-204ENST00000527149 QKIQ96PU8 341 aaKnown RBP eCLIP16.9■□□□□ 0.3
SMCO4-204ENST00000527149 MGME1Q9BQP7 344 aa16.9■□□□□ 0.3
SMCO4-204ENST00000527149 KCNH6Q9H252 994 aa16.9■□□□□ 0.3
SMCO4-204ENST00000527149 ZSCAN32Q9NX65 697 aa16.9■□□□□ 0.3
SMCO4-204ENST00000527149 SEPT3Q9UH03 358 aa16.9■□□□□ 0.3
SMCO4-204ENST00000527149 R3HDM2Q9Y2K5 976 aaKnown RBP16.9■□□□□ 0.3
SMCO4-204ENST00000527149 GON4LQ3T8J9 2241 aa16.9■□□□□ 0.3
SMCO4-204ENST00000527149 H0Y858 1186 aa16.89■□□□□ 0.29
SMCO4-204ENST00000527149 PPP1R12AO14974 1030 aaPredicted RBP16.89■□□□□ 0.29
SMCO4-204ENST00000527149 BNIP3LO60238 219 aa16.89■□□□□ 0.29
SMCO4-204ENST00000527149 LILRB5O75023 590 aa16.89■□□□□ 0.29
SMCO4-204ENST00000527149 TJP3O95049 919 aa16.89■□□□□ 0.29
SMCO4-204ENST00000527149 IGSF6O95976 241 aa16.89■□□□□ 0.29
SMCO4-204ENST00000527149 IGLV3-19P01714 112 aa16.89■□□□□ 0.29
SMCO4-204ENST00000527149 GKP32189 559 aa16.89■□□□□ 0.29
SMCO4-204ENST00000527149 CHRNA3P32297 505 aa16.89■□□□□ 0.29
SMCO4-204ENST00000527149 CETN2P41208 172 aa16.89■□□□□ 0.29
SMCO4-204ENST00000527149 PSMD8P48556 350 aa16.89■□□□□ 0.29
SMCO4-204ENST00000527149 SNRPD1P62314 119 aaKnown RBP16.89■□□□□ 0.29
SMCO4-204ENST00000527149 ZBTB16Q05516 673 aa16.89■□□□□ 0.29
SMCO4-204ENST00000527149 ZBTB17Q13105 803 aa16.89■□□□□ 0.29
SMCO4-204ENST00000527149 SIX1Q15475 284 aaPredicted RBP16.89■□□□□ 0.29
SMCO4-204ENST00000527149 CST6Q15828 149 aa16.89■□□□□ 0.29
SMCO4-204ENST00000527149 SEL1L2Q5TEA6 688 aa16.89■□□□□ 0.29
SMCO4-204ENST00000527149 ALG1LQ6GMV1 187 aa16.89■□□□□ 0.29
SMCO4-204ENST00000527149 TIGD7Q6NT04 549 aaPredicted RBP16.89■□□□□ 0.29
SMCO4-204ENST00000527149 KIAA1324Q6UXG2 1013 aaKnown RBP16.89■□□□□ 0.29
SMCO4-204ENST00000527149 B4GALNT4Q76KP1 1039 aa16.89■□□□□ 0.29
SMCO4-204ENST00000527149 SLC13A5Q86YT5 568 aaPredicted RBP16.89■□□□□ 0.29
SMCO4-204ENST00000527149 AADATQ8N5Z0 425 aa16.89■□□□□ 0.29
SMCO4-204ENST00000527149 OR6K2Q8NGY2 324 aa16.89■□□□□ 0.29
SMCO4-204ENST00000527149 P3H4Q92791 437 aa16.89■□□□□ 0.29
SMCO4-204ENST00000527149 CCDC114Q96M63 670 aa16.89■□□□□ 0.29
SMCO4-204ENST00000527149 GDAP1L1Q96MZ0 367 aa16.89■□□□□ 0.29
SMCO4-204ENST00000527149 IL12RB2Q99665 862 aa16.89■□□□□ 0.29
SMCO4-204ENST00000527149 CINPQ9BW66 212 aaPredicted RBP16.89■□□□□ 0.29
SMCO4-204ENST00000527149 BRD8Q9H0E9 1235 aa16.89■□□□□ 0.29
SMCO4-204ENST00000527149 PABPC3Q9H361 631 aaKnown RBP16.89■□□□□ 0.29
SMCO4-204ENST00000527149 BCCIPQ9P287 314 aaKnown RBP eCLIP16.89■□□□□ 0.29
SMCO4-204ENST00000527149 SERGEFQ9UGK8 458 aa16.89■□□□□ 0.29
SMCO4-204ENST00000527149 PCDHGA2Q9Y5H1 932 aa16.89■□□□□ 0.29
SMCO4-204ENST00000527149 KCNK1O00180 336 aa16.88■□□□□ 0.29
SMCO4-204ENST00000527149 MID1O15344 667 aa16.88■□□□□ 0.29
SMCO4-204ENST00000527149 INSIG1O15503 277 aa16.88■□□□□ 0.29
SMCO4-204ENST00000527149 CXCR5P32302 372 aa16.88■□□□□ 0.29
SMCO4-204ENST00000527149 DRD3P35462 400 aa16.88■□□□□ 0.29
SMCO4-204ENST00000527149 P2RY2P41231 377 aa16.88■□□□□ 0.29
SMCO4-204ENST00000527149 MMP13P45452 471 aa16.88■□□□□ 0.29
SMCO4-204ENST00000527149 CSNK1DP48730 415 aa16.88■□□□□ 0.29
SMCO4-204ENST00000527149 NRLP54845 237 aa16.88■□□□□ 0.29
SMCO4-204ENST00000527149 XRCC4Q13426 336 aa16.88■□□□□ 0.29
SMCO4-204ENST00000527149 ZNF235Q14590 738 aa16.88■□□□□ 0.29
SMCO4-204ENST00000527149 MYLK3Q32MK0 819 aa16.88■□□□□ 0.29
SMCO4-204ENST00000527149 FAM182AQ5T1J6 154 aa16.88■□□□□ 0.29
SMCO4-204ENST00000527149 BZW1Q7L1Q6 419 aaKnown RBP16.88■□□□□ 0.29
SMCO4-204ENST00000527149 DSG4Q86SJ6 1040 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms