RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 LZTS3O60299 673 aaPredicted RBP16.44■□□□□ 0.22
PTPRU-210ENST00000527027 ENDOD1O94919 500 aa16.44■□□□□ 0.22
PTPRU-210ENST00000527027 F9P00740 461 aa16.44■□□□□ 0.22
PTPRU-210ENST00000527027 NME1P15531 152 aaKnown RBP16.44■□□□□ 0.22
PTPRU-210ENST00000527027 KRT9P35527 623 aa16.44■□□□□ 0.22
PTPRU-210ENST00000527027 RNASE9P60153 205 aaKnown RBP16.44■□□□□ 0.22
PTPRU-210ENST00000527027 SLC20A2Q08357 652 aa16.44■□□□□ 0.22
PTPRU-210ENST00000527027 MAPK8IP2Q13387 824 aaPredicted RBP16.44■□□□□ 0.22
PTPRU-210ENST00000527027 ISXQ2M1V0 245 aa16.44■□□□□ 0.22
PTPRU-210ENST00000527027 PTPN20Q4JDL3 420 aa16.44■□□□□ 0.22
PTPRU-210ENST00000527027 ACBD5Q5T8D3 534 aaPredicted RBP16.44■□□□□ 0.22
PTPRU-210ENST00000527027 KIAA1161Q6NSJ0 714 aa16.44■□□□□ 0.22
PTPRU-210ENST00000527027 ZCCHC8Q6NZY4 707 aaKnown RBP16.44■□□□□ 0.22
PTPRU-210ENST00000527027 KYAT3Q6YP21 454 aaKnown RBP16.44■□□□□ 0.22
PTPRU-210ENST00000527027 GBP6Q6ZN66 633 aa16.44■□□□□ 0.22
PTPRU-210ENST00000527027 ZDHHC17Q8IUH5 632 aa16.44■□□□□ 0.22
PTPRU-210ENST00000527027 ZNF548Q8NEK5 533 aaPredicted RBP16.44■□□□□ 0.22
PTPRU-210ENST00000527027 NT5C3BQ969T7 300 aa16.44■□□□□ 0.22
PTPRU-210ENST00000527027 GRAMD1AQ96CP6 724 aa16.44■□□□□ 0.22
PTPRU-210ENST00000527027 TMEM51Q9NW97 253 aa16.44■□□□□ 0.22
PTPRU-210ENST00000527027 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.44■□□□□ 0.22
PTPRU-210ENST00000527027 NCKIPSDQ9NZQ3 722 aa16.44■□□□□ 0.22
PTPRU-210ENST00000527027 MPP6Q9NZW5 540 aa16.44■□□□□ 0.22
PTPRU-210ENST00000527027 PAXBP1Q9Y5B6 917 aa16.44■□□□□ 0.22
PTPRU-210ENST00000527027 FADS3Q9Y5Q0 445 aa16.44■□□□□ 0.22
PTPRU-210ENST00000527027 SNX10Q9Y5X0 201 aa16.44■□□□□ 0.22
PTPRU-210ENST00000527027 WASF2Q9Y6W5 498 aa16.44■□□□□ 0.22
PTPRU-210ENST00000527027 IGLV3-10A0A075B6K4 115 aa16.43■□□□□ 0.22
PTPRU-210ENST00000527027 H3BM21 787 aa16.43■□□□□ 0.22
PTPRU-210ENST00000527027 RIOK3O14730 519 aaKnown RBP16.43■□□□□ 0.22
PTPRU-210ENST00000527027 ZNF821O75541 412 aaPredicted RBP16.43■□□□□ 0.22
PTPRU-210ENST00000527027 ADRB3P13945 408 aa16.43■□□□□ 0.22
PTPRU-210ENST00000527027 TFE3P19532 575 aaPredicted RBP16.43■□□□□ 0.22
PTPRU-210ENST00000527027 TGM2P21980 687 aa16.43■□□□□ 0.22
PTPRU-210ENST00000527027 OR1E1P30953 314 aa16.43■□□□□ 0.22
PTPRU-210ENST00000527027 L1CAMP32004 1257 aa16.43■□□□□ 0.22
PTPRU-210ENST00000527027 RABIFP47224 123 aa16.43■□□□□ 0.22
PTPRU-210ENST00000527027 APBA1Q02410 837 aa16.43■□□□□ 0.22
PTPRU-210ENST00000527027 DEUP1Q05D60 604 aa16.43■□□□□ 0.22
PTPRU-210ENST00000527027 FGL2Q14314 439 aa16.43■□□□□ 0.22
PTPRU-210ENST00000527027 RETSATQ6NUM9 610 aa16.43■□□□□ 0.22
PTPRU-210ENST00000527027 IGF2-ASQ6U949 168 aa16.43■□□□□ 0.22
PTPRU-210ENST00000527027 ZNF783Q6ZMS7 281 aa16.43■□□□□ 0.22
PTPRU-210ENST00000527027 TFAP2DQ7Z6R9 452 aa16.43■□□□□ 0.22
PTPRU-210ENST00000527027 PARGQ86W56 976 aa16.43■□□□□ 0.22
PTPRU-210ENST00000527027 OR7D4Q8NG98 312 aa16.43■□□□□ 0.22
PTPRU-210ENST00000527027 SNRNP27Q8WVK2 155 aaKnown RBP16.43■□□□□ 0.22
PTPRU-210ENST00000527027 PGAP3Q96FM1 320 aaPredicted RBP16.43■□□□□ 0.22
PTPRU-210ENST00000527027 VCPIP1Q96JH7 1222 aa16.43■□□□□ 0.22
PTPRU-210ENST00000527027 LENG8Q96PV6 779 aaPredicted RBP16.43■□□□□ 0.22
PTPRU-210ENST00000527027 HEPHQ9BQS7 1158 aa16.43■□□□□ 0.22
PTPRU-210ENST00000527027 SPON2Q9BUD6 331 aa16.43■□□□□ 0.22
PTPRU-210ENST00000527027 CEP44Q9C0F1 390 aa16.43■□□□□ 0.22
PTPRU-210ENST00000527027 IPO11Q9UI26 975 aaKnown RBP16.43■□□□□ 0.22
PTPRU-210ENST00000527027 SALL4Q9UJQ4 1053 aa16.43■□□□□ 0.22
PTPRU-210ENST00000527027 STAP1Q9ULZ2 295 aa16.43■□□□□ 0.22
PTPRU-210ENST00000527027 SSUH2Q9Y2M2 353 aa16.43■□□□□ 0.22
PTPRU-210ENST00000527027 ILVBLA1L0T0 632 aa16.42■□□□□ 0.22
PTPRU-210ENST00000527027 CPED1A4D0V7 1026 aa16.42■□□□□ 0.22
PTPRU-210ENST00000527027 RAD51BO15315 384 aa16.42■□□□□ 0.22
PTPRU-210ENST00000527027 AQP9O43315 295 aa16.42■□□□□ 0.22
PTPRU-210ENST00000527027 AP1G1O43747 822 aa16.42■□□□□ 0.22
PTPRU-210ENST00000527027 ITGB7P26010 798 aa16.42■□□□□ 0.22
PTPRU-210ENST00000527027 RBMS1P29558 406 aaKnown RBP16.42■□□□□ 0.22
PTPRU-210ENST00000527027 SULT1E1P49888 294 aa16.42■□□□□ 0.22
PTPRU-210ENST00000527027 VAC14Q08AM6 782 aa16.42■□□□□ 0.22
PTPRU-210ENST00000527027 SGCGQ13326 291 aa16.42■□□□□ 0.22
PTPRU-210ENST00000527027 CDKN3Q16667 212 aa16.42■□□□□ 0.22
PTPRU-210ENST00000527027 EXOC3L4Q17RC7 722 aa16.42■□□□□ 0.22
PTPRU-210ENST00000527027 CARD16Q5EG05 197 aa16.42■□□□□ 0.22
PTPRU-210ENST00000527027 ZSCAN30Q86W11 494 aa16.42■□□□□ 0.22
PTPRU-210ENST00000527027 CREBRFQ8IUR6 639 aa16.42■□□□□ 0.22
PTPRU-210ENST00000527027 PCDH20Q8N6Y1 951 aaKnown RBP16.42■□□□□ 0.22
PTPRU-210ENST00000527027 TPCN2Q8NHX9 752 aa16.42■□□□□ 0.22
PTPRU-210ENST00000527027 SLC46A1Q96NT5 459 aa16.42■□□□□ 0.22
PTPRU-210ENST00000527027 C1QTNF2Q9BXJ5 285 aa16.42■□□□□ 0.22
PTPRU-210ENST00000527027 KLF15Q9UIH9 416 aa16.42■□□□□ 0.22
PTPRU-210ENST00000527027 SATB2Q9UPW6 733 aa16.42■□□□□ 0.22
PTPRU-210ENST00000527027 TDRD6O60522 2096 aaKnown RBP16.42■□□□□ 0.22
PTPRU-210ENST00000527027 PIEZO2Q9H5I5 2752 aa16.41■□□□□ 0.22
PTPRU-210ENST00000527027 EME2A4GXA9 379 aaPredicted RBP16.41■□□□□ 0.22
PTPRU-210ENST00000527027 FPGTO14772 594 aa16.41■□□□□ 0.22
PTPRU-210ENST00000527027 TPP1O14773 563 aa16.41■□□□□ 0.22
PTPRU-210ENST00000527027 SRGAP2O75044 1071 aa16.41■□□□□ 0.22
PTPRU-210ENST00000527027 ZMPSTE24O75844 475 aa16.41■□□□□ 0.22
PTPRU-210ENST00000527027 JUNDP17535 347 aa16.41■□□□□ 0.22
PTPRU-210ENST00000527027 PON1P27169 355 aa16.41■□□□□ 0.22
PTPRU-210ENST00000527027 CLCN1P35523 988 aa16.41■□□□□ 0.22
PTPRU-210ENST00000527027 SERPINH1P50454 418 aaKnown RBP16.41■□□□□ 0.22
PTPRU-210ENST00000527027 DNA2P51530 1060 aa16.41■□□□□ 0.22
PTPRU-210ENST00000527027 PDE1CQ14123 709 aaPredicted RBP16.41■□□□□ 0.22
PTPRU-210ENST00000527027 SLC25A52Q3SY17 297 aa16.41■□□□□ 0.22
PTPRU-210ENST00000527027 C3orf38Q5JPI3 329 aa16.41■□□□□ 0.22
PTPRU-210ENST00000527027 ARTNQ5T4W7 220 aa16.41■□□□□ 0.22
PTPRU-210ENST00000527027 GUSBP11Q6P575 273 aa16.41■□□□□ 0.22
PTPRU-210ENST00000527027 EFL1Q7Z2Z2 1120 aaKnown RBP16.41■□□□□ 0.22
PTPRU-210ENST00000527027 SLC47A2Q86VL8 602 aa16.41■□□□□ 0.22
PTPRU-210ENST00000527027 ATXN7L3BQ96GX2 97 aa16.41■□□□□ 0.22
PTPRU-210ENST00000527027 TBCBQ99426 244 aa16.41■□□□□ 0.22
PTPRU-210ENST00000527027 KLF6Q99612 283 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms