RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 CEP97Q8IW35 865 aa20.67■□□□□ 0.9
SMIM3-201ENST00000526627 LSMEM2Q8N112 164 aa20.67■□□□□ 0.9
SMIM3-201ENST00000526627 FSTL5Q8N475 847 aaPredicted RBP20.67■□□□□ 0.9
SMIM3-201ENST00000526627 HASPINQ8TF76 798 aa20.67■□□□□ 0.9
SMIM3-201ENST00000526627 LENG8Q96PV6 779 aaPredicted RBP20.67■□□□□ 0.9
SMIM3-201ENST00000526627 RTKNQ9BST9 563 aa20.67■□□□□ 0.9
SMIM3-201ENST00000526627 FICDQ9BVA6 458 aa20.67■□□□□ 0.9
SMIM3-201ENST00000526627 FTHL17Q9BXU8 183 aa20.67■□□□□ 0.9
SMIM3-201ENST00000526627 SLC2A6Q9UGQ3 507 aa20.67■□□□□ 0.9
SMIM3-201ENST00000526627 MRPL42Q9Y6G3 142 aaKnown RBP20.67■□□□□ 0.9
SMIM3-201ENST00000526627 NYNRINQ9P2P1 1898 aaKnown RBP20.67■□□□□ 0.9
SMIM3-201ENST00000526627 GOLGA8QA0A0J9YX86 632 aa20.67■□□□□ 0.9
SMIM3-201ENST00000526627 GOLGA8OA6NCC3 632 aa20.67■□□□□ 0.9
SMIM3-201ENST00000526627 GOLGA8NF8WBI6 632 aa20.67■□□□□ 0.9
SMIM3-201ENST00000526627 MAP3K13O43283 966 aa20.67■□□□□ 0.9
SMIM3-201ENST00000526627 NEBLO76041 1014 aa20.67■□□□□ 0.9
SMIM3-201ENST00000526627 PIGNO95427 931 aa20.67■□□□□ 0.9
SMIM3-201ENST00000526627 RGS2P41220 211 aa20.67■□□□□ 0.9
SMIM3-201ENST00000526627 TBL3Q12788 808 aaKnown RBP20.67■□□□□ 0.9
SMIM3-201ENST00000526627 CTBP1Q13363 440 aa20.67■□□□□ 0.9
SMIM3-201ENST00000526627 SLC12A1Q13621 1099 aa20.67■□□□□ 0.9
SMIM3-201ENST00000526627 ZNF460Q14592 562 aa20.67■□□□□ 0.9
SMIM3-201ENST00000526627 MTG1Q9BT17 334 aaPredicted RBP20.67■□□□□ 0.9
SMIM3-201ENST00000526627 SFMBT1Q9UHJ3 866 aa20.67■□□□□ 0.9
SMIM3-201ENST00000526627 M0QZQ0 153 aa20.66■□□□□ 0.9
SMIM3-201ENST00000526627 MATN3O15232 486 aa20.66■□□□□ 0.9
SMIM3-201ENST00000526627 HDAC3O15379 428 aa20.66■□□□□ 0.9
SMIM3-201ENST00000526627 MSI1O43347 362 aaKnown RBP20.66■□□□□ 0.9
SMIM3-201ENST00000526627 VAPBO95292 243 aa20.66■□□□□ 0.9
SMIM3-201ENST00000526627 RPL14P50914 215 aaKnown RBP20.66■□□□□ 0.9
SMIM3-201ENST00000526627 DSG1Q02413 1049 aa20.66■□□□□ 0.9
SMIM3-201ENST00000526627 DLG1Q12959 904 aa20.66■□□□□ 0.9
SMIM3-201ENST00000526627 BRMS1LQ5PSV4 323 aa20.66■□□□□ 0.9
SMIM3-201ENST00000526627 LRRC8EQ6NSJ5 796 aa20.66■□□□□ 0.9
SMIM3-201ENST00000526627 DHDDSQ86SQ9 333 aa20.66■□□□□ 0.9
SMIM3-201ENST00000526627 SERINC5Q86VE9 423 aa20.66■□□□□ 0.9
SMIM3-201ENST00000526627 LCA5Q86VQ0 697 aa20.66■□□□□ 0.9
SMIM3-201ENST00000526627 METTL23Q86XA0 190 aa20.66■□□□□ 0.9
SMIM3-201ENST00000526627 FBXW8Q8N3Y1 598 aa20.66■□□□□ 0.9
SMIM3-201ENST00000526627 UPF1Q92900 1129 aaKnown RBP eCLIP20.66■□□□□ 0.99e-7■■■■■ 28.4
SMIM3-201ENST00000526627 CCDC124Q96CT7 223 aaKnown RBP20.66■□□□□ 0.9
SMIM3-201ENST00000526627 ZNF385DQ9H6B1 395 aa20.66■□□□□ 0.9
SMIM3-201ENST00000526627 ZDHHC2Q9UIJ5 367 aa20.66■□□□□ 0.9
SMIM3-201ENST00000526627 ARHGAP26Q9UNA1 814 aa20.66■□□□□ 0.9
SMIM3-201ENST00000526627 SSX2IPQ9Y2D8 614 aa20.66■□□□□ 0.9
SMIM3-201ENST00000526627 TCAF1Q9Y4C2 921 aa20.66■□□□□ 0.9
SMIM3-201ENST00000526627 DNAH12Q6ZR08 3092 aa20.66■□□□□ 0.9
SMIM3-201ENST00000526627 DLX3O60479 287 aa20.66■□□□□ 0.9
SMIM3-201ENST00000526627 DUSP11O75319 330 aaKnown RBP20.66■□□□□ 0.9
SMIM3-201ENST00000526627 ANXA9O76027 345 aa20.66■□□□□ 0.9
SMIM3-201ENST00000526627 DDHD2O94830 711 aa20.66■□□□□ 0.9
SMIM3-201ENST00000526627 HLA-DQB2P05538 268 aa20.66■□□□□ 0.9
SMIM3-201ENST00000526627 AKR1A1P14550 325 aa20.66■□□□□ 0.9
SMIM3-201ENST00000526627 PIK3R1P27986 724 aa20.66■□□□□ 0.9
SMIM3-201ENST00000526627 PRKAA2P54646 552 aa20.66■□□□□ 0.9
SMIM3-201ENST00000526627 NAGLUP54802 743 aa20.66■□□□□ 0.9
SMIM3-201ENST00000526627 MTTPP55157 894 aa20.66■□□□□ 0.9
SMIM3-201ENST00000526627 NSUN2Q08J23 767 aaKnown RBP eCLIP20.66■□□□□ 0.9
SMIM3-201ENST00000526627 LSM12Q3MHD2 195 aaKnown RBP20.66■□□□□ 0.9
SMIM3-201ENST00000526627 GNASQ5JWF2 1037 aa20.66■□□□□ 0.9
SMIM3-201ENST00000526627 TSTD2Q5T7W7 516 aa20.66■□□□□ 0.9
SMIM3-201ENST00000526627 CCDC117Q8IWD4 279 aaPredicted RBP20.66■□□□□ 0.9
SMIM3-201ENST00000526627 CASP10Q92851 521 aa20.66■□□□□ 0.9
SMIM3-201ENST00000526627 CNDP1Q96KN2 507 aa20.66■□□□□ 0.9
SMIM3-201ENST00000526627 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.66■□□□□ 0.9
SMIM3-201ENST00000526627 ZNF623O75123 536 aa20.65■□□□□ 0.9
SMIM3-201ENST00000526627 COL6A2P12110 1019 aa20.65■□□□□ 0.9
SMIM3-201ENST00000526627 TFEBP19484 476 aa20.65■□□□□ 0.9
SMIM3-201ENST00000526627 AFMIDQ63HM1 303 aa20.65■□□□□ 0.9
SMIM3-201ENST00000526627 SEL1L3Q68CR1 1132 aa20.65■□□□□ 0.9
SMIM3-201ENST00000526627 C17orf99Q6UX52 265 aa20.65■□□□□ 0.9
SMIM3-201ENST00000526627 SCD5Q86SK9 330 aa20.65■□□□□ 0.9
SMIM3-201ENST00000526627 SLC26A7Q8TE54 656 aa20.65■□□□□ 0.9
SMIM3-201ENST00000526627 JADE3Q92613 823 aa20.65■□□□□ 0.9
SMIM3-201ENST00000526627 IFT43Q96FT9 208 aa20.65■□□□□ 0.9
SMIM3-201ENST00000526627 SCYL1Q96KG9 808 aa20.65■□□□□ 0.9
SMIM3-201ENST00000526627 FCRL2Q96LA5 508 aaPredicted RBP20.65■□□□□ 0.9
SMIM3-201ENST00000526627 TREX1Q9NSU2 369 aa20.65■□□□□ 0.9
SMIM3-201ENST00000526627 ADAMTS6Q9UKP5 1117 aa20.65■□□□□ 0.9
SMIM3-201ENST00000526627 NEMP1O14524 444 aa20.65■□□□□ 0.9
SMIM3-201ENST00000526627 TNFRSF10BO14763 440 aa20.65■□□□□ 0.9
SMIM3-201ENST00000526627 GPR182O15218 404 aa20.65■□□□□ 0.9
SMIM3-201ENST00000526627 ITGB1P05556 798 aa20.65■□□□□ 0.9
SMIM3-201ENST00000526627 DNAJB1P25685 340 aa20.65■□□□□ 0.9
SMIM3-201ENST00000526627 EPHA3P29320 983 aa20.65■□□□□ 0.9
SMIM3-201ENST00000526627 SERPINB5P36952 375 aa20.65■□□□□ 0.9
SMIM3-201ENST00000526627 RAB10P61026 200 aa20.65■□□□□ 0.9
SMIM3-201ENST00000526627 TAF1CQ15572 869 aaPredicted RBP20.65■□□□□ 0.9
SMIM3-201ENST00000526627 GSTA3Q16772 222 aa20.65■□□□□ 0.9
SMIM3-201ENST00000526627 TCHHL1Q5QJ38 904 aaPredicted RBP20.65■□□□□ 0.9
SMIM3-201ENST00000526627 TMC7Q7Z402 723 aa20.65■□□□□ 0.9
SMIM3-201ENST00000526627 RSPH1Q8WYR4 309 aa20.65■□□□□ 0.9
SMIM3-201ENST00000526627 NXNL1Q96CM4 212 aa20.65■□□□□ 0.9
SMIM3-201ENST00000526627 PPP1R36Q96LQ0 422 aa20.65■□□□□ 0.9
SMIM3-201ENST00000526627 SMOC2Q9H3U7 446 aa20.65■□□□□ 0.9
SMIM3-201ENST00000526627 XPR1Q9UBH6 696 aa20.65■□□□□ 0.9
SMIM3-201ENST00000526627 FAM95CA0A1B0GW59 222 aa20.64■□□□□ 0.89
SMIM3-201ENST00000526627 MAGEA13PA6NCF6 341 aa20.64■□□□□ 0.89
SMIM3-201ENST00000526627 F8W810 466 aa20.64■□□□□ 0.89
SMIM3-201ENST00000526627 FGF10O15520 208 aaPredicted RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms