RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 SH3BP5O60239 455 aa13.08□□□□□ -0.32
TRAPPC4-205ENST00000525079 RNGTTO60942 597 aaKnown RBP13.08□□□□□ -0.32
TRAPPC4-205ENST00000525079 LRCH4O75427 683 aa13.08□□□□□ -0.32
TRAPPC4-205ENST00000525079 GJB3O75712 270 aa13.08□□□□□ -0.32
TRAPPC4-205ENST00000525079 WNT1P04628 370 aa13.08□□□□□ -0.32
TRAPPC4-205ENST00000525079 GRIA4P48058 902 aa13.08□□□□□ -0.32
TRAPPC4-205ENST00000525079 YBEYP58557 167 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC4-205ENST00000525079 RACK1P63244 317 aaKnown RBP13.08□□□□□ -0.32
TRAPPC4-205ENST00000525079 PPP6R3Q5H9R7 873 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC4-205ENST00000525079 PRAMEF14Q5SWL7 426 aa13.08□□□□□ -0.32
TRAPPC4-205ENST00000525079 ATXN7L2Q5T6C5 722 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC4-205ENST00000525079 SPECC1LQ69YQ0 1117 aa13.08□□□□□ -0.32
TRAPPC4-205ENST00000525079 ALKBH5Q6P6C2 394 aaKnown RBP13.08□□□□□ -0.32
TRAPPC4-205ENST00000525079 PIP4P1Q86T03 277 aa13.08□□□□□ -0.32
TRAPPC4-205ENST00000525079 PRPF39Q86UA1 669 aaKnown RBP13.08□□□□□ -0.32
TRAPPC4-205ENST00000525079 FNIP1Q8TF40 1166 aa13.08□□□□□ -0.32
TRAPPC4-205ENST00000525079 FAM131CQ96AQ9 280 aa13.08□□□□□ -0.32
TRAPPC4-205ENST00000525079 SERAC1Q96JX3 654 aa13.08□□□□□ -0.32
TRAPPC4-205ENST00000525079 NUP85Q9BW27 656 aa13.08□□□□□ -0.32
TRAPPC4-205ENST00000525079 SLC32A1Q9H598 525 aa13.08□□□□□ -0.32
TRAPPC4-205ENST00000525079 ZWILCHQ9H900 591 aa13.08□□□□□ -0.32
TRAPPC4-205ENST00000525079 FNDC3AQ9Y2H6 1198 aaKnown RBP13.08□□□□□ -0.32
TRAPPC4-205ENST00000525079 CHD5Q8TDI0 1954 aa13.08□□□□□ -0.32
TRAPPC4-205ENST00000525079 TMEM131Q92545 1883 aa13.08□□□□□ -0.32
TRAPPC4-205ENST00000525079 ASCC3Q8N3C0 2202 aaKnown RBP13.07□□□□□ -0.32
TRAPPC4-205ENST00000525079 C10orf142B7Z368 130 aa13.07□□□□□ -0.32
TRAPPC4-205ENST00000525079 KRIT1O00522 736 aa13.07□□□□□ -0.32
TRAPPC4-205ENST00000525079 FGF10O15520 208 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC4-205ENST00000525079 CER1O95813 267 aa13.07□□□□□ -0.32
TRAPPC4-205ENST00000525079 CYP1A2P05177 515 aa13.07□□□□□ -0.32
TRAPPC4-205ENST00000525079 CEACAM1P13688 526 aa13.07□□□□□ -0.32
TRAPPC4-205ENST00000525079 IL1R2P27930 398 aa13.07□□□□□ -0.32
TRAPPC4-205ENST00000525079 C21orf59P57076 290 aa13.07□□□□□ -0.32
TRAPPC4-205ENST00000525079 GEMIN4P57678 1058 aaKnown RBP13.07□□□□□ -0.32
TRAPPC4-205ENST00000525079 FAM193AP78312 1265 aa13.07□□□□□ -0.32
TRAPPC4-205ENST00000525079 SERINC3Q13530 473 aa13.07□□□□□ -0.32
TRAPPC4-205ENST00000525079 SMTNL2Q2TAL5 461 aa13.07□□□□□ -0.32
TRAPPC4-205ENST00000525079 TXNRD3NBQ6F5E7 133 aa13.07□□□□□ -0.32
TRAPPC4-205ENST00000525079 IL27RAQ6UWB1 636 aa13.07□□□□□ -0.32
TRAPPC4-205ENST00000525079 RFX8Q6ZV50 586 aa13.07□□□□□ -0.32
TRAPPC4-205ENST00000525079 ERN2Q76MJ5 926 aaKnown RBP13.07□□□□□ -0.32
TRAPPC4-205ENST00000525079 VSTM4Q8IW00 320 aa13.07□□□□□ -0.32
TRAPPC4-205ENST00000525079 UMODL1-AS1Q8N2C9 162 aa13.07□□□□□ -0.32
TRAPPC4-205ENST00000525079 HSPH1Q92598 858 aa13.07□□□□□ -0.32
TRAPPC4-205ENST00000525079 ISG20Q96AZ6 181 aaKnown RBP13.07□□□□□ -0.32
TRAPPC4-205ENST00000525079 MYOCQ99972 504 aa13.07□□□□□ -0.32
TRAPPC4-205ENST00000525079 SLC39A8Q9C0K1 460 aa13.07□□□□□ -0.32
TRAPPC4-205ENST00000525079 KDM4CQ9H3R0 1056 aa13.07□□□□□ -0.32
TRAPPC4-205ENST00000525079 TM7SF3Q9NS93 570 aa13.07□□□□□ -0.32
TRAPPC4-205ENST00000525079 ANAPC7Q9UJX3 599 aa13.07□□□□□ -0.32
TRAPPC4-205ENST00000525079 CA5BQ9Y2D0 317 aa13.07□□□□□ -0.32
TRAPPC4-205ENST00000525079 A0A1W2PQU0 124 aa13.06□□□□□ -0.32
TRAPPC4-205ENST00000525079 A0A1W2PR77 199 aa13.06□□□□□ -0.32
TRAPPC4-205ENST00000525079 UPK3BL1B0FP48 263 aa13.06□□□□□ -0.32
TRAPPC4-205ENST00000525079 UPK3BL2E5RIL1 263 aa13.06□□□□□ -0.32
TRAPPC4-205ENST00000525079 H0Y8X5 98 aa13.06□□□□□ -0.32
TRAPPC4-205ENST00000525079 J3KR12 359 aa13.06□□□□□ -0.32
TRAPPC4-205ENST00000525079 VILLO15195 856 aa13.06□□□□□ -0.32
TRAPPC4-205ENST00000525079 SLC31A1O15431 190 aa13.06□□□□□ -0.32
TRAPPC4-205ENST00000525079 LATO43561 262 aa13.06□□□□□ -0.32
TRAPPC4-205ENST00000525079 TMCC1O94876 653 aa13.06□□□□□ -0.32
TRAPPC4-205ENST00000525079 PCDH8O95206 1070 aa13.06□□□□□ -0.32
TRAPPC4-205ENST00000525079 GSRP00390 522 aa13.06□□□□□ -0.32
TRAPPC4-205ENST00000525079 ERCC2P18074 760 aa13.06□□□□□ -0.32
TRAPPC4-205ENST00000525079 CD38P28907 300 aa13.06□□□□□ -0.32
TRAPPC4-205ENST00000525079 HNRNPH3P31942 346 aaKnown RBP13.06□□□□□ -0.32
TRAPPC4-205ENST00000525079 CTSKP43235 329 aa13.06□□□□□ -0.32
TRAPPC4-205ENST00000525079 SSR1P43307 286 aaKnown RBP13.06□□□□□ -0.32
TRAPPC4-205ENST00000525079 PAPOLAP51003 745 aaKnown RBP13.06□□□□□ -0.32
TRAPPC4-205ENST00000525079 ADKP55263 362 aaKnown RBP13.06□□□□□ -0.32
TRAPPC4-205ENST00000525079 SNRPD1P62314 119 aaKnown RBP13.06□□□□□ -0.32
TRAPPC4-205ENST00000525079 IL9RQ01113 521 aa13.06□□□□□ -0.32
TRAPPC4-205ENST00000525079 SLC14A1Q13336 389 aa13.06□□□□□ -0.32
TRAPPC4-205ENST00000525079 CYTH1Q15438 398 aa13.06□□□□□ -0.32
TRAPPC4-205ENST00000525079 MYLK3Q32MK0 819 aa13.06□□□□□ -0.32
TRAPPC4-205ENST00000525079 PARP15Q460N3 678 aa13.06□□□□□ -0.32
TRAPPC4-205ENST00000525079 TRIM69Q86WT6 500 aa13.06□□□□□ -0.32
TRAPPC4-205ENST00000525079 OR2AP1Q8NGE2 309 aa13.06□□□□□ -0.32
TRAPPC4-205ENST00000525079 OR8K1Q8NGG5 319 aa13.06□□□□□ -0.32
TRAPPC4-205ENST00000525079 SETD7Q8WTS6 366 aaKnown RBP13.06□□□□□ -0.32
TRAPPC4-205ENST00000525079 PPP1R16AQ96I34 528 aa13.06□□□□□ -0.32
TRAPPC4-205ENST00000525079 PACSIN1Q9BY11 444 aa13.06□□□□□ -0.32
TRAPPC4-205ENST00000525079 HDAC8Q9BY41 377 aa13.06□□□□□ -0.32
TRAPPC4-205ENST00000525079 LRRC19Q9H756 370 aa13.06□□□□□ -0.32
TRAPPC4-205ENST00000525079 PREBQ9HCU5 417 aa13.06□□□□□ -0.32
TRAPPC4-205ENST00000525079 CWC15Q9P013 229 aaKnown RBP13.06□□□□□ -0.32
TRAPPC4-205ENST00000525079 NENFQ9UMX5 172 aa13.06□□□□□ -0.32
TRAPPC4-205ENST00000525079 MFHAS1Q9Y4C4 1052 aa13.06□□□□□ -0.32
TRAPPC4-205ENST00000525079 DOCK9Q9BZ29 2069 aa13.06□□□□□ -0.32
TRAPPC4-205ENST00000525079 ZSCAN5CA6NGD5 496 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC4-205ENST00000525079 DFFAO00273 331 aa13.05□□□□□ -0.32
TRAPPC4-205ENST00000525079 POP4O95707 220 aaKnown RBP13.05□□□□□ -0.32
TRAPPC4-205ENST00000525079 TOP3BO95985 862 aaKnown RBP13.05□□□□□ -0.32
TRAPPC4-205ENST00000525079 RARAP10276 462 aa13.05□□□□□ -0.32
TRAPPC4-205ENST00000525079 ADRB3P13945 408 aa13.05□□□□□ -0.32
TRAPPC4-205ENST00000525079 PRLRP16471 622 aa13.05□□□□□ -0.32
TRAPPC4-205ENST00000525079 AMPD1P23109 780 aa13.05□□□□□ -0.32
TRAPPC4-205ENST00000525079 ITGB7P26010 798 aa13.05□□□□□ -0.32
TRAPPC4-205ENST00000525079 HTR7P34969 479 aa13.05□□□□□ -0.32
TRAPPC4-205ENST00000525079 PCK1P35558 622 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms