RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 PRAMEF4O60810 478 aa7.45□□□□□ -1.22
NEDD8-203ENST00000524927 LY86O95711 162 aa7.45□□□□□ -1.22
NEDD8-203ENST00000524927 LDOC1O95751 146 aaPredicted RBP7.45□□□□□ -1.22
NEDD8-203ENST00000524927 CLDN1O95832 211 aa7.45□□□□□ -1.22
NEDD8-203ENST00000524927 CYP1A1P04798 512 aaPredicted RBP7.45□□□□□ -1.22
NEDD8-203ENST00000524927 PRKCBP05771 671 aa7.45□□□□□ -1.22
NEDD8-203ENST00000524927 RNF224P0DH78 156 aa7.45□□□□□ -1.22
NEDD8-203ENST00000524927 ZNF28P17035 718 aa7.45□□□□□ -1.22
NEDD8-203ENST00000524927 TOP3AQ13472 1001 aaPredicted RBP7.45□□□□□ -1.22
NEDD8-203ENST00000524927 MAP9Q49MG5 647 aa7.45□□□□□ -1.22
NEDD8-203ENST00000524927 KLHDC10Q6PID8 442 aa7.45□□□□□ -1.22
NEDD8-203ENST00000524927 B3GNT9Q6UX72 402 aa7.45□□□□□ -1.22
NEDD8-203ENST00000524927 IL17RCQ8NAC3 791 aa7.45□□□□□ -1.22
NEDD8-203ENST00000524927 GPR156Q8NFN8 814 aa7.45□□□□□ -1.22
NEDD8-203ENST00000524927 HDAC10Q969S8 669 aa7.45□□□□□ -1.22
NEDD8-203ENST00000524927 KIF1BPQ96EK5 621 aa7.45□□□□□ -1.22
NEDD8-203ENST00000524927 CCDC51Q96ER9 411 aa7.45□□□□□ -1.22
NEDD8-203ENST00000524927 MVB12AQ96EY5 273 aa7.45□□□□□ -1.22
NEDD8-203ENST00000524927 CNDP2Q96KP4 475 aaKnown RBP7.45□□□□□ -1.22
NEDD8-203ENST00000524927 TAAR9Q96RI9 348 aa7.45□□□□□ -1.22
NEDD8-203ENST00000524927 MXRA8Q9BRK3 442 aa7.45□□□□□ -1.22
NEDD8-203ENST00000524927 TASP1Q9H6P5 420 aa7.45□□□□□ -1.22
NEDD8-203ENST00000524927 NTMQ9P121 344 aa7.45□□□□□ -1.22
NEDD8-203ENST00000524927 KCTD3Q9Y597 815 aa7.45□□□□□ -1.22
NEDD8-203ENST00000524927 MEI4A8MW99 385 aa7.44□□□□□ -1.22
NEDD8-203ENST00000524927 KLHL18O94889 574 aa7.44□□□□□ -1.22
NEDD8-203ENST00000524927 KLF8O95600 359 aaPredicted RBP7.44□□□□□ -1.22
NEDD8-203ENST00000524927 ADRA1BP35368 520 aa7.44□□□□□ -1.22
NEDD8-203ENST00000524927 ETV4P43268 484 aa7.44□□□□□ -1.22
NEDD8-203ENST00000524927 NT5C2P49902 561 aa7.44□□□□□ -1.22
NEDD8-203ENST00000524927 SESN2P58004 480 aaPredicted RBP7.44□□□□□ -1.22
NEDD8-203ENST00000524927 DNAJC3Q13217 504 aa7.44□□□□□ -1.22
NEDD8-203ENST00000524927 PLD1Q13393 1074 aa7.44□□□□□ -1.22
NEDD8-203ENST00000524927 DRP2Q13474 957 aa7.44□□□□□ -1.22
NEDD8-203ENST00000524927 GRM3Q14832 879 aa7.44□□□□□ -1.22
NEDD8-203ENST00000524927 TBR1Q16650 682 aa7.44□□□□□ -1.22
NEDD8-203ENST00000524927 ZSCAN23Q3MJ62 389 aa7.44□□□□□ -1.22
NEDD8-203ENST00000524927 TRMT1LQ7Z2T5 733 aaKnown RBP7.44□□□□□ -1.22
NEDD8-203ENST00000524927 PPP1R14CQ8TAE6 165 aa7.44□□□□□ -1.22
NEDD8-203ENST00000524927 IGSF8Q969P0 613 aa7.44□□□□□ -1.22
NEDD8-203ENST00000524927 GFM2Q969S9 779 aaKnown RBP7.44□□□□□ -1.22
NEDD8-203ENST00000524927 PIGSQ96S52 555 aa7.44□□□□□ -1.22
NEDD8-203ENST00000524927 TMEM168Q9H0V1 697 aa7.44□□□□□ -1.22
NEDD8-203ENST00000524927 RIOX1Q9H6W3 641 aa7.44□□□□□ -1.22
NEDD8-203ENST00000524927 KIF9Q9HAQ2 790 aa7.44□□□□□ -1.22
NEDD8-203ENST00000524927 AGO4Q9HCK5 861 aaKnown RBP7.44□□□□□ -1.22
NEDD8-203ENST00000524927 NRBP2Q9NSY0 501 aa7.44□□□□□ -1.22
NEDD8-203ENST00000524927 CACNG4Q9UBN1 327 aa7.44□□□□□ -1.22
NEDD8-203ENST00000524927 AFF4Q9UHB7 1163 aaKnown RBP7.44□□□□□ -1.22
NEDD8-203ENST00000524927 SCOCQ9UIL1 159 aa7.44□□□□□ -1.22
NEDD8-203ENST00000524927 PHTF1Q9UMS5 762 aa7.44□□□□□ -1.22
NEDD8-203ENST00000524927 PCDHB1Q9Y5F3 818 aa7.44□□□□□ -1.22
NEDD8-203ENST00000524927 A0A1B0GVT2 93 aa7.43□□□□□ -1.22
NEDD8-203ENST00000524927 A0A1W2PR48 441 aa7.43□□□□□ -1.22
NEDD8-203ENST00000524927 CASTOR2A6NHX0 329 aa7.43□□□□□ -1.22
NEDD8-203ENST00000524927 TMEM189-UBE2V1I3L0A0 370 aa7.43□□□□□ -1.22
NEDD8-203ENST00000524927 HNRNPRO43390 633 aaKnown RBP7.43□□□□□ -1.22
NEDD8-203ENST00000524927 TRAPPC3O43617 180 aa7.43□□□□□ -1.22
NEDD8-203ENST00000524927 DFNA5O60443 496 aa7.43□□□□□ -1.22
NEDD8-203ENST00000524927 MT-CO3P00414 261 aa7.43□□□□□ -1.22
NEDD8-203ENST00000524927 LTA4HP09960 611 aaKnown RBP7.43□□□□□ -1.22
NEDD8-203ENST00000524927 PRF1P14222 555 aa7.43□□□□□ -1.22
NEDD8-203ENST00000524927 GABRG2P18507 467 aa7.43□□□□□ -1.22
NEDD8-203ENST00000524927 CTSSP25774 331 aa7.43□□□□□ -1.22
NEDD8-203ENST00000524927 TKTP29401 623 aaKnown RBP7.43□□□□□ -1.22
NEDD8-203ENST00000524927 ADSLP30566 484 aaPredicted RBP7.43□□□□□ -1.22
NEDD8-203ENST00000524927 MEF2AQ02078 507 aaPredicted RBP7.43□□□□□ -1.22
NEDD8-203ENST00000524927 ST3GAL1Q11201 340 aa7.43□□□□□ -1.22
NEDD8-203ENST00000524927 MORC3Q14149 939 aa7.43□□□□□ -1.22
NEDD8-203ENST00000524927 GBX1Q14549 363 aa7.43□□□□□ -1.22
NEDD8-203ENST00000524927 KIF19Q2TAC6 998 aa7.43□□□□□ -1.22
NEDD8-203ENST00000524927 PGS1Q32NB8 556 aa7.43□□□□□ -1.22
NEDD8-203ENST00000524927 C3orf36Q3SXR2 165 aa7.43□□□□□ -1.22
NEDD8-203ENST00000524927 CAPRIN2Q6IMN6 1127 aaKnown RBP7.43□□□□□ -1.22
NEDD8-203ENST00000524927 KDM7AQ6ZMT4 941 aa7.43□□□□□ -1.22
NEDD8-203ENST00000524927 TIPARPQ7Z3E1 657 aaKnown RBP7.43□□□□□ -1.22
NEDD8-203ENST00000524927 RHPN2Q8IUC4 686 aa7.43□□□□□ -1.22
NEDD8-203ENST00000524927 CADM4Q8NFZ8 388 aa7.43□□□□□ -1.22
NEDD8-203ENST00000524927 C1GALT1C1Q96EU7 318 aa7.43□□□□□ -1.22
NEDD8-203ENST00000524927 ACO2Q99798 780 aaKnown RBP7.43□□□□□ -1.22
NEDD8-203ENST00000524927 C7orf25Q9BPX7 421 aa7.43□□□□□ -1.22
NEDD8-203ENST00000524927 SPATA25Q9BR10 227 aa7.43□□□□□ -1.22
NEDD8-203ENST00000524927 EIF2AQ9BY44 585 aaKnown RBP7.43□□□□□ -1.22
NEDD8-203ENST00000524927 ARNT2Q9HBZ2 717 aa7.43□□□□□ -1.22
NEDD8-203ENST00000524927 ECHDC1Q9NTX5 307 aa7.43□□□□□ -1.22
NEDD8-203ENST00000524927 VWA7Q9Y334 891 aa7.43□□□□□ -1.22
NEDD8-203ENST00000524927 HES2Q9Y543 173 aa7.43□□□□□ -1.22
NEDD8-203ENST00000524927 MYH9P35579 1960 aaKnown RBP7.42□□□□□ -1.22
NEDD8-203ENST00000524927 IGKV6-21A0A0C4DH24 114 aa7.42□□□□□ -1.22
NEDD8-203ENST00000524927 ANTXRLA6NF34 631 aa7.42□□□□□ -1.22
NEDD8-203ENST00000524927 FAM171A2A8MVW0 826 aa7.42□□□□□ -1.22
NEDD8-203ENST00000524927 DDX39AO00148 427 aaKnown RBP7.42□□□□□ -1.22
NEDD8-203ENST00000524927 TMEM127O75204 238 aa7.42□□□□□ -1.22
NEDD8-203ENST00000524927 GAAP10253 952 aa7.42□□□□□ -1.22
NEDD8-203ENST00000524927 WASP42768 502 aa7.42□□□□□ -1.22
NEDD8-203ENST00000524927 DUSP3P51452 185 aaPredicted RBP7.42□□□□□ -1.22
NEDD8-203ENST00000524927 AFF3P51826 1226 aaKnown RBP7.42□□□□□ -1.22
NEDD8-203ENST00000524927 RRADP55042 308 aa7.42□□□□□ -1.22
NEDD8-203ENST00000524927 E2F1Q01094 437 aa7.42□□□□□ -1.22
NEDD8-203ENST00000524927 PPP3CAQ08209 521 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms