RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 FAXCQ5TGI0 409 aa16.09■□□□□ 0.17
TSPAN4-213ENST00000524895 C22orf39Q6P5X5 142 aa16.09■□□□□ 0.17
TSPAN4-213ENST00000524895 RNF135Q8IUD6 432 aa16.09■□□□□ 0.17
TSPAN4-213ENST00000524895 SFTPA1Q8IWL2 248 aa16.09■□□□□ 0.17
TSPAN4-213ENST00000524895 PGBD5Q8N414 524 aa16.09■□□□□ 0.17
TSPAN4-213ENST00000524895 TSEN2Q8NCE0 465 aaKnown RBP16.09■□□□□ 0.17
TSPAN4-213ENST00000524895 SNF8Q96H20 258 aa16.09■□□□□ 0.17
TSPAN4-213ENST00000524895 EXOC2Q96KP1 924 aa16.09■□□□□ 0.17
TSPAN4-213ENST00000524895 MRGPRX3Q96LB0 322 aa16.09■□□□□ 0.17
TSPAN4-213ENST00000524895 MGME1Q9BQP7 344 aa16.09■□□□□ 0.17
TSPAN4-213ENST00000524895 CEP44Q9C0F1 390 aa16.09■□□□□ 0.17
TSPAN4-213ENST00000524895 FBRSL1Q9HCM7 1045 aaKnown RBP16.09■□□□□ 0.17
TSPAN4-213ENST00000524895 RAB6BQ9NRW1 208 aa16.09■□□□□ 0.17
TSPAN4-213ENST00000524895 LHX3Q9UBR4 397 aa16.09■□□□□ 0.17
TSPAN4-213ENST00000524895 DMGDHQ9UI17 866 aaKnown RBP16.09■□□□□ 0.17
TSPAN4-213ENST00000524895 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.08■□□□□ 0.16
TSPAN4-213ENST00000524895 E7EVH7 732 aa16.08■□□□□ 0.16
TSPAN4-213ENST00000524895 MUSKO15146 869 aa16.08■□□□□ 0.16
TSPAN4-213ENST00000524895 METTL18O95568 372 aa16.08■□□□□ 0.16
TSPAN4-213ENST00000524895 DRD1P21728 446 aa16.08■□□□□ 0.16
TSPAN4-213ENST00000524895 CD68P34810 354 aaPredicted RBP16.08■□□□□ 0.16
TSPAN4-213ENST00000524895 FDFT1P37268 417 aa16.08■□□□□ 0.16
TSPAN4-213ENST00000524895 VASPP50552 380 aaPredicted RBP16.08■□□□□ 0.16
TSPAN4-213ENST00000524895 DLG2Q15700 870 aa16.08■□□□□ 0.16
TSPAN4-213ENST00000524895 ERCC6LQ2NKX8 1250 aa16.08■□□□□ 0.16
TSPAN4-213ENST00000524895 TMEM196Q5HYL7 178 aa16.08■□□□□ 0.16
TSPAN4-213ENST00000524895 IZUMO3Q5VZ72 239 aa16.08■□□□□ 0.16
TSPAN4-213ENST00000524895 DUPD1Q68J44 220 aa16.08■□□□□ 0.16
TSPAN4-213ENST00000524895 PCDH20Q8N6Y1 951 aaKnown RBP16.08■□□□□ 0.16
TSPAN4-213ENST00000524895 FAM3CQ92520 227 aa16.08■□□□□ 0.16
TSPAN4-213ENST00000524895 PPP1R2P1Q96PQ5 205 aa16.08■□□□□ 0.16
TSPAN4-213ENST00000524895 HINFPQ9BQA5 517 aa16.08■□□□□ 0.16
TSPAN4-213ENST00000524895 TM6SF2Q9BZW4 377 aa16.08■□□□□ 0.16
TSPAN4-213ENST00000524895 SLC25A51Q9H1U9 297 aa16.08■□□□□ 0.16
TSPAN4-213ENST00000524895 EPB41L5Q9HCM4 733 aa16.08■□□□□ 0.16
TSPAN4-213ENST00000524895 ARHGEF3Q9NR81 526 aa16.08■□□□□ 0.16
TSPAN4-213ENST00000524895 SLCO3A1Q9UIG8 710 aa16.08■□□□□ 0.16
TSPAN4-213ENST00000524895 FBXL21Q9UKT6 434 aa16.08■□□□□ 0.16
TSPAN4-213ENST00000524895 CA14Q9ULX7 337 aa16.08■□□□□ 0.16
TSPAN4-213ENST00000524895 SNX24Q9Y343 169 aa16.08■□□□□ 0.16
TSPAN4-213ENST00000524895 MUC22E2RYF6 1773 aaPredicted RBP16.08■□□□□ 0.16
TSPAN4-213ENST00000524895 ESYT3A0FGR9 886 aa16.07■□□□□ 0.16
TSPAN4-213ENST00000524895 TARSL2A2RTX5 802 aaKnown RBP16.07■□□□□ 0.16
TSPAN4-213ENST00000524895 GOLGA6CA6NDK9 693 aa16.07■□□□□ 0.16
TSPAN4-213ENST00000524895 GOLGA6BA6NDN3 693 aa16.07■□□□□ 0.16
TSPAN4-213ENST00000524895 MAN2B1O00754 1011 aa16.07■□□□□ 0.16
TSPAN4-213ENST00000524895 DNALI1O14645 258 aaPredicted RBP16.07■□□□□ 0.16
TSPAN4-213ENST00000524895 NDC80O14777 642 aa16.07■□□□□ 0.16
TSPAN4-213ENST00000524895 ATP9BO43861 1147 aa16.07■□□□□ 0.16
TSPAN4-213ENST00000524895 IGSF6O95976 241 aa16.07■□□□□ 0.16
TSPAN4-213ENST00000524895 GOLGA6DP0CG33 693 aa16.07■□□□□ 0.16
TSPAN4-213ENST00000524895 RPL21P46778 160 aaKnown RBP16.07■□□□□ 0.16
TSPAN4-213ENST00000524895 LMAN1P49257 510 aa16.07■□□□□ 0.16
TSPAN4-213ENST00000524895 SEC13P55735 322 aa16.07■□□□□ 0.16
TSPAN4-213ENST00000524895 DSC2Q02487 901 aa16.07■□□□□ 0.16
TSPAN4-213ENST00000524895 CALCOCO2Q13137 446 aa16.07■□□□□ 0.16
TSPAN4-213ENST00000524895 ZNF234Q14588 700 aa16.07■□□□□ 0.16
TSPAN4-213ENST00000524895 ATXN7L2Q5T6C5 722 aaPredicted RBP16.07■□□□□ 0.16
TSPAN4-213ENST00000524895 FSTL4Q6MZW2 842 aa16.07■□□□□ 0.16
TSPAN4-213ENST00000524895 SERPINA13PQ6UXR4 307 aa16.07■□□□□ 0.16
TSPAN4-213ENST00000524895 IFT20Q8IY31 132 aa16.07■□□□□ 0.16
TSPAN4-213ENST00000524895 UBALD2Q8IYN6 164 aa16.07■□□□□ 0.16
TSPAN4-213ENST00000524895 GJD3Q8N144 294 aa16.07■□□□□ 0.16
TSPAN4-213ENST00000524895 RYBPQ8N488 228 aaPredicted RBP16.07■□□□□ 0.16
TSPAN4-213ENST00000524895 KDM1BQ8NB78 822 aa16.07■□□□□ 0.16
TSPAN4-213ENST00000524895 BBOF1Q8ND07 529 aa16.07■□□□□ 0.16
TSPAN4-213ENST00000524895 ISG20Q96AZ6 181 aaKnown RBP16.07■□□□□ 0.16
TSPAN4-213ENST00000524895 GDAP1L1Q96MZ0 367 aa16.07■□□□□ 0.16
TSPAN4-213ENST00000524895 FCRL5Q96RD9 977 aa16.07■□□□□ 0.16
TSPAN4-213ENST00000524895 SEMA3CQ99985 751 aa16.07■□□□□ 0.16
TSPAN4-213ENST00000524895 TNKS2Q9H2K2 1166 aa16.07■□□□□ 0.16
TSPAN4-213ENST00000524895 ETNK1Q9HBU6 452 aa16.07■□□□□ 0.16
TSPAN4-213ENST00000524895 SCUBE2Q9NQ36 999 aa16.07■□□□□ 0.16
TSPAN4-213ENST00000524895 GOLGA6AQ9NYA3 693 aa16.07■□□□□ 0.16
TSPAN4-213ENST00000524895 TPX2Q9ULW0 747 aaKnown RBP16.07■□□□□ 0.16
TSPAN4-213ENST00000524895 STARD13Q9Y3M8 1113 aa16.07■□□□□ 0.16
TSPAN4-213ENST00000524895 COL6A3P12111 3177 aa16.07■□□□□ 0.16
TSPAN4-213ENST00000524895 TTC34A8MYJ7 566 aa16.06■□□□□ 0.16
TSPAN4-213ENST00000524895 K7EQS6 105 aa16.06■□□□□ 0.16
TSPAN4-213ENST00000524895 BNIP3LO60238 219 aa16.06■□□□□ 0.16
TSPAN4-213ENST00000524895 ANXA9O76027 345 aa16.06■□□□□ 0.16
TSPAN4-213ENST00000524895 SEC31AO94979 1220 aaKnown RBP16.06■□□□□ 0.16
TSPAN4-213ENST00000524895 GSRP00390 522 aa16.06■□□□□ 0.16
TSPAN4-213ENST00000524895 EGFP01133 1207 aa16.06■□□□□ 0.16
TSPAN4-213ENST00000524895 CES1P23141 567 aa16.06■□□□□ 0.16
TSPAN4-213ENST00000524895 CD86P42081 329 aa16.06■□□□□ 0.16
TSPAN4-213ENST00000524895 RECQLP46063 649 aaPredicted RBP16.06■□□□□ 0.16
TSPAN4-213ENST00000524895 RGRP47804 291 aa16.06■□□□□ 0.16
TSPAN4-213ENST00000524895 SCNN1BP51168 640 aa16.06■□□□□ 0.16
TSPAN4-213ENST00000524895 SNRPD1P62314 119 aaKnown RBP16.06■□□□□ 0.16
TSPAN4-213ENST00000524895 PRKCQQ04759 706 aa16.06■□□□□ 0.16
TSPAN4-213ENST00000524895 NSUN2Q08J23 767 aaKnown RBP eCLIP16.06■□□□□ 0.16
TSPAN4-213ENST00000524895 SEMA5AQ13591 1074 aa16.06■□□□□ 0.16
TSPAN4-213ENST00000524895 DGKKQ5KSL6 1271 aa16.06■□□□□ 0.16
TSPAN4-213ENST00000524895 EGFLAMQ63HQ2 1017 aa16.06■□□□□ 0.16
TSPAN4-213ENST00000524895 ALG1LQ6GMV1 187 aa16.06■□□□□ 0.16
TSPAN4-213ENST00000524895 ZNF852Q6ZMS4 543 aa16.06■□□□□ 0.16
TSPAN4-213ENST00000524895 Q6ZVU0 165 aa16.06■□□□□ 0.16
TSPAN4-213ENST00000524895 PCGF5Q86SE9 256 aa16.06■□□□□ 0.16
TSPAN4-213ENST00000524895 ZNF513Q8N8E2 541 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms