RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 MAN1A1P33908 653 aa21.27■■□□□ 1
TRAPPC9-215ENST00000524162 GRIA4P48058 902 aa21.27■■□□□ 1
TRAPPC9-215ENST00000524162 SNRPD1P62314 119 aaKnown RBP21.27■■□□□ 1
TRAPPC9-215ENST00000524162 SLC25A11Q02978 314 aaKnown RBP21.27■■□□□ 1
TRAPPC9-215ENST00000524162 NCEH1Q6PIU2 408 aa21.27■■□□□ 1
TRAPPC9-215ENST00000524162 IL27RAQ6UWB1 636 aa21.27■■□□□ 1
TRAPPC9-215ENST00000524162 ZSCAN30Q86W11 494 aa21.27■■□□□ 1
TRAPPC9-215ENST00000524162 TRIM69Q86WT6 500 aa21.27■■□□□ 1
TRAPPC9-215ENST00000524162 OR2AP1Q8NGE2 309 aa21.27■■□□□ 1
TRAPPC9-215ENST00000524162 HMCESQ96FZ2 354 aa21.27■■□□□ 1
TRAPPC9-215ENST00000524162 CHP1Q99653 195 aa21.27■■□□□ 1
TRAPPC9-215ENST00000524162 KLC2Q9H0B6 622 aa21.27■■□□□ 1
TRAPPC9-215ENST00000524162 DNAAF2Q9NVR5 837 aaKnown RBP21.27■■□□□ 1
TRAPPC9-215ENST00000524162 GPATCH2LQ9NWQ4 482 aa21.27■■□□□ 1
TRAPPC9-215ENST00000524162 CWC15Q9P013 229 aaKnown RBP21.27■■□□□ 1
TRAPPC9-215ENST00000524162 MFHAS1Q9Y4C4 1052 aa21.27■■□□□ 1
TRAPPC9-215ENST00000524162 WASF2Q9Y6W5 498 aa21.27■■□□□ 1
TRAPPC9-215ENST00000524162 ARHGAP42A6NI28 874 aa21.26■□□□□ 0.99
TRAPPC9-215ENST00000524162 DAPK3O43293 454 aa21.26■□□□□ 0.99
TRAPPC9-215ENST00000524162 PROSCO94903 275 aa21.26■□□□□ 0.99
TRAPPC9-215ENST00000524162 RARAP10276 462 aa21.26■□□□□ 0.99
TRAPPC9-215ENST00000524162 ERCC2P18074 760 aa21.26■□□□□ 0.99
TRAPPC9-215ENST00000524162 ITGB7P26010 798 aa21.26■□□□□ 0.99
TRAPPC9-215ENST00000524162 MAOBP27338 520 aa21.26■□□□□ 0.99
TRAPPC9-215ENST00000524162 ARL4AP40617 200 aa21.26■□□□□ 0.99
TRAPPC9-215ENST00000524162 CCNHP51946 323 aaPredicted RBP21.26■□□□□ 0.99
TRAPPC9-215ENST00000524162 RACK1P63244 317 aaKnown RBP21.26■□□□□ 0.99
TRAPPC9-215ENST00000524162 CNTN1Q12860 1018 aa21.26■□□□□ 0.99
TRAPPC9-215ENST00000524162 SLC14A1Q13336 389 aa21.26■□□□□ 0.99
TRAPPC9-215ENST00000524162 HADHQ16836 314 aaKnown RBP21.26■□□□□ 0.99
TRAPPC9-215ENST00000524162 PPP6R3Q5H9R7 873 aaPredicted RBP21.26■□□□□ 0.99
TRAPPC9-215ENST00000524162 PIP5KL1Q5T9C9 394 aa21.26■□□□□ 0.99
TRAPPC9-215ENST00000524162 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.26■□□□□ 0.99
TRAPPC9-215ENST00000524162 POLNQ7Z5Q5 900 aa21.26■□□□□ 0.99
TRAPPC9-215ENST00000524162 RHOT2Q8IXI1 618 aa21.26■□□□□ 0.99
TRAPPC9-215ENST00000524162 ZCCHC9Q8N567 271 aaKnown RBP21.26■□□□□ 0.99
TRAPPC9-215ENST00000524162 TC2NQ8N9U0 490 aa21.26■□□□□ 0.99
TRAPPC9-215ENST00000524162 OR14C36Q8NHC7 312 aa21.26■□□□□ 0.99
TRAPPC9-215ENST00000524162 OSBPL1AQ9BXW6 950 aa21.26■□□□□ 0.99
TRAPPC9-215ENST00000524162 RBSNQ9H1K0 784 aa21.26■□□□□ 0.99
TRAPPC9-215ENST00000524162 CTTNBP2NLQ9P2B4 639 aa21.26■□□□□ 0.99
TRAPPC9-215ENST00000524162 DMTF1Q9Y222 760 aa21.26■□□□□ 0.99
TRAPPC9-215ENST00000524162 TP53BP1Q12888 1972 aaPredicted RBP21.26■□□□□ 0.99
TRAPPC9-215ENST00000524162 C4orf47A7E2U8 309 aa21.25■□□□□ 0.99
TRAPPC9-215ENST00000524162 BUB1O43683 1085 aa21.25■□□□□ 0.99
TRAPPC9-215ENST00000524162 PRAMEF11O60813 436 aa21.25■□□□□ 0.99
TRAPPC9-215ENST00000524162 POP4O95707 220 aaKnown RBP21.25■□□□□ 0.99
TRAPPC9-215ENST00000524162 ZNF883P0CG24 379 aa21.25■□□□□ 0.99
TRAPPC9-215ENST00000524162 ARHGAP25P42331 645 aa21.25■□□□□ 0.99
TRAPPC9-215ENST00000524162 ATXN3P54252 364 aaPredicted RBP21.25■□□□□ 0.99
TRAPPC9-215ENST00000524162 TEAD4Q15561 434 aa21.25■□□□□ 0.99
TRAPPC9-215ENST00000524162 CHST14Q8NCH0 376 aa21.25■□□□□ 0.99
TRAPPC9-215ENST00000524162 TSC1Q92574 1164 aa21.25■□□□□ 0.99
TRAPPC9-215ENST00000524162 ANP32EQ9BTT0 268 aa21.25■□□□□ 0.99
TRAPPC9-215ENST00000524162 TNKS2Q9H2K2 1166 aa21.25■□□□□ 0.99
TRAPPC9-215ENST00000524162 PDFQ9HBH1 243 aa21.25■□□□□ 0.99
TRAPPC9-215ENST00000524162 DYRK4Q9NR20 520 aa21.25■□□□□ 0.99
TRAPPC9-215ENST00000524162 HECAQ9UBI9 543 aaPredicted RBP21.25■□□□□ 0.99
TRAPPC9-215ENST00000524162 FCF1Q9Y324 198 aaKnown RBP21.25■□□□□ 0.99
TRAPPC9-215ENST00000524162 KPNA3O00505 521 aaPredicted RBP21.24■□□□□ 0.99
TRAPPC9-215ENST00000524162 BNIP3LO60238 219 aa21.24■□□□□ 0.99
TRAPPC9-215ENST00000524162 LEFTY1O75610 366 aa21.24■□□□□ 0.99
TRAPPC9-215ENST00000524162 GJB3O75712 270 aa21.24■□□□□ 0.99
TRAPPC9-215ENST00000524162 TMCC1O94876 653 aa21.24■□□□□ 0.99
TRAPPC9-215ENST00000524162 FSBPO95073 299 aa21.24■□□□□ 0.99
TRAPPC9-215ENST00000524162 LCA5LO95447 670 aa21.24■□□□□ 0.99
TRAPPC9-215ENST00000524162 CSRP1P21291 193 aaKnown RBP21.24■□□□□ 0.99
TRAPPC9-215ENST00000524162 ZNF75DP51815 510 aa21.24■□□□□ 0.99
TRAPPC9-215ENST00000524162 METAP1P53582 386 aa21.24■□□□□ 0.99
TRAPPC9-215ENST00000524162 RFTN1Q14699 578 aaPredicted RBP21.24■□□□□ 0.99
TRAPPC9-215ENST00000524162 GRM3Q14832 879 aa21.24■□□□□ 0.99
TRAPPC9-215ENST00000524162 ARSIQ5FYB1 569 aa21.24■□□□□ 0.99
TRAPPC9-215ENST00000524162 TMCO4Q5TGY1 634 aa21.24■□□□□ 0.99
TRAPPC9-215ENST00000524162 ERN2Q76MJ5 926 aaKnown RBP21.24■□□□□ 0.99
TRAPPC9-215ENST00000524162 ARHGAP12Q8IWW6 846 aa21.24■□□□□ 0.99
TRAPPC9-215ENST00000524162 RAB7BQ96AH8 199 aa21.24■□□□□ 0.99
TRAPPC9-215ENST00000524162 GDAP1L1Q96MZ0 367 aa21.24■□□□□ 0.99
TRAPPC9-215ENST00000524162 PACSIN1Q9BY11 444 aa21.24■□□□□ 0.99
TRAPPC9-215ENST00000524162 CPEB1Q9BZB8 566 aaKnown RBP21.24■□□□□ 0.99
TRAPPC9-215ENST00000524162 MIR1-1HGQ9H1L0 117 aa21.24■□□□□ 0.99
TRAPPC9-215ENST00000524162 TM9SF3Q9HD45 589 aa21.24■□□□□ 0.99
TRAPPC9-215ENST00000524162 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.24■□□□□ 0.99
TRAPPC9-215ENST00000524162 TBC1D3DA0A087WVF3 549 aa21.23■□□□□ 0.99
TRAPPC9-215ENST00000524162 TBC1D3IA0A087WXS9 549 aa21.23■□□□□ 0.99
TRAPPC9-215ENST00000524162 TBC1D3EA0A087X179 549 aa21.23■□□□□ 0.99
TRAPPC9-215ENST00000524162 TBC1D3KA0A087X1G2 549 aa21.23■□□□□ 0.99
TRAPPC9-215ENST00000524162 TBC1D3FA6NER0 549 aaPredicted RBP21.23■□□□□ 0.99
TRAPPC9-215ENST00000524162 TBC1D3LB9A6J9 549 aa21.23■□□□□ 0.99
TRAPPC9-215ENST00000524162 AP1G1O43747 822 aa21.23■□□□□ 0.99
TRAPPC9-215ENST00000524162 RNGTTO60942 597 aaKnown RBP21.23■□□□□ 0.99
TRAPPC9-215ENST00000524162 KRT7P08729 469 aa21.23■□□□□ 0.99
TRAPPC9-215ENST00000524162 TBC1D3HP0C7X1 549 aa21.23■□□□□ 0.99
TRAPPC9-215ENST00000524162 TCF4P15884 667 aa21.23■□□□□ 0.99
TRAPPC9-215ENST00000524162 TAS2R38P59533 333 aa21.23■□□□□ 0.99
TRAPPC9-215ENST00000524162 RAD51Q06609 339 aa21.23■□□□□ 0.99
TRAPPC9-215ENST00000524162 GRIK2Q13002 908 aa21.23■□□□□ 0.99
TRAPPC9-215ENST00000524162 MYLK3Q32MK0 819 aa21.23■□□□□ 0.99
TRAPPC9-215ENST00000524162 KCNT1Q5JUK3 1230 aa21.23■□□□□ 0.99
TRAPPC9-215ENST00000524162 TBC1D3GQ6DHY5 549 aa21.23■□□□□ 0.99
TRAPPC9-215ENST00000524162 TBC1D3CQ6IPX1 549 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms