RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	RNF8	O76064	485 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	ALDH1A2	O94788	518 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	IL18RAP	O95256	599 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	TNNC2	P02585	160 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	PABPC4L	P0CB38	370 aa	Known RBP	7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	SMIM18	P0DKX4	95 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	VDR	P11473	427 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	HARS	P12081	509 aa	Known RBP	7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	HOXB8	P17481	243 aa	Predicted RBP	7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	CA8	P35219	290 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	GRIA2	P42262	883 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	MAGEA12	P43365	314 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	RAP1GAP	P47736	663 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	ATP5O	P48047	213 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	SMCP	P49901	116 aa	Predicted RBP	7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	CDH6	P55285	790 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	PDE1B	Q01064	536 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	INCA1	Q0VD86	236 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	POU4F2	Q12837	409 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	STX3	Q13277	289 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	DYNC1I2	Q13409	638 aa	Known RBP	7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	SEMA5A	Q13591	1074 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	BMPR2	Q13873	1038 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	TEAD4	Q15561	434 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	CNPY1	Q3B7I2	92 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	ZNF394	Q53GI3	561 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	RAB6C	Q53S08	254 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	SFT2D3	Q587I9	215 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	NOMO2	Q5JPE7	1267 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	EFHC1	Q5JVL4	640 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	LGSN	Q5TDP6	509 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	C6orf163	Q5TEZ5	329 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	TRMT10B	Q6PF06	316 aa	Known RBP	7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	MPZL3	Q6UWV2	235 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	ATG14	Q6ZNE5	492 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	RAPH1	Q70E73	1250 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	DHDDS	Q86SQ9	333 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	CCNJL	Q8IV13	435 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	NUDCD3	Q8IVD9	361 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	CDKL3	Q8IVW4	592 aa	Predicted RBP	7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	SLC39A11	Q8N1S5	342 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	TAB3	Q8N5C8	712 aa	Predicted RBP	7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	ACTRT2	Q8TDY3	377 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	HSPH1	Q92598	858 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	EDA	Q92838	391 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	LPP	Q93052	612 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	PGBD4	Q96DM1	585 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	TMEM169	Q96HH4	297 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	ANKRD36BP1	Q96IX9	119 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	ZFP42	Q96MM3	310 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	OLFM3	Q96PB7	478 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	QKI	Q96PU8	341 aa	Known RBP eCLIP	7.98	□□□□□ -1.13	7e-9	■■■■■ 36.4
SPIDR-223	ENST00000524033	SORT1	Q99523	831 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	EBNA1BP2	Q99848	306 aa	Known RBP	7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	GORASP1	Q9BQQ3	440 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	EBF4	Q9BQW3	602 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	ZNF670	Q9BS34	389 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	C2orf49	Q9BVC5	232 aa	Predicted RBP	7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	PHF7	Q9BWX1	381 aa	Predicted RBP	7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	SPATA16	Q9BXB7	569 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	TRIM4	Q9C037	500 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	GRIP2	Q9C0E4	1043 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	RAB6C	Q9H0N0	254 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	C2orf40	Q9H1Z8	148 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	S1PR5	Q9H228	398 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	FAM96A	Q9H5X1	160 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	SMYD3	Q9H7B4	428 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	NEUROD4	Q9HD90	331 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	DMAP1	Q9NPF5	467 aa	Predicted RBP	7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	FAM105A	Q9NUU6	356 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	PCMTD2	Q9NV79	361 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	MOCS1	Q9NZB8	636 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	ZC3H7B	Q9UGR2	993 aa	Known RBP	7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	HMGXB4	Q9UGU5	601 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	PCSK1N	Q9UHG2	260 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	HRH3	Q9Y5N1	445 aa		7.98	□□□□□ -1.13
SPIDR-223	ENST00000524033	MYO9B	Q13459	2157 aa		7.97	□□□□□ -1.13
SPIDR-223	ENST00000524033		H3BNX3	289 aa		7.97	□□□□□ -1.13
SPIDR-223	ENST00000524033	APOL1	O14791	398 aa		7.97	□□□□□ -1.13
SPIDR-223	ENST00000524033	MDM4	O15151	490 aa		7.97	□□□□□ -1.13
SPIDR-223	ENST00000524033	ITM2A	O43736	263 aa		7.97	□□□□□ -1.13
SPIDR-223	ENST00000524033	PLIN3	O60664	434 aa		7.97	□□□□□ -1.13
SPIDR-223	ENST00000524033	GLRA3	O75311	464 aa		7.97	□□□□□ -1.13
SPIDR-223	ENST00000524033	AVIL	O75366	819 aa		7.97	□□□□□ -1.13
SPIDR-223	ENST00000524033	GCAT	O75600	419 aa		7.97	□□□□□ -1.13
SPIDR-223	ENST00000524033	KLHL2	O95198	593 aa		7.97	□□□□□ -1.13
SPIDR-223	ENST00000524033	PROC	P04070	461 aa		7.97	□□□□□ -1.13
SPIDR-223	ENST00000524033	ALDH2	P05091	517 aa		7.97	□□□□□ -1.13
SPIDR-223	ENST00000524033	SERPINE1	P05121	402 aa		7.97	□□□□□ -1.13
SPIDR-223	ENST00000524033	UBTFL6	P0CB48	400 aa	Predicted RBP	7.97	□□□□□ -1.13
SPIDR-223	ENST00000524033	UQCRB	P14927	111 aa		7.97	□□□□□ -1.13
SPIDR-223	ENST00000524033	CD19	P15391	556 aa		7.97	□□□□□ -1.13
SPIDR-223	ENST00000524033	RHOQ	P17081	205 aa		7.97	□□□□□ -1.13
SPIDR-223	ENST00000524033	RBL1	P28749	1068 aa		7.97	□□□□□ -1.13
SPIDR-223	ENST00000524033	HOXA11	P31270	313 aa	Predicted RBP	7.97	□□□□□ -1.13
SPIDR-223	ENST00000524033	HARS2	P49590	506 aa	Known RBP	7.97	□□□□□ -1.13
SPIDR-223	ENST00000524033	AQP5	P55064	265 aa		7.97	□□□□□ -1.13
SPIDR-223	ENST00000524033	LSAMP	Q13449	338 aa		7.97	□□□□□ -1.13
SPIDR-223	ENST00000524033	BIRC2	Q13490	618 aa		7.97	□□□□□ -1.13
SPIDR-223	ENST00000524033	MTM1	Q13496	603 aa		7.97	□□□□□ -1.13

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