RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 YBEYP58557 167 aaPredicted RBP18.18■□□□□ 0.5
CLK4-211ENST00000522556 BNC1Q01954 994 aa18.18■□□□□ 0.5
CLK4-211ENST00000522556 DUOXA1Q1HG43 343 aa18.18■□□□□ 0.5
CLK4-211ENST00000522556 PARP15Q460N3 678 aa18.18■□□□□ 0.5
CLK4-211ENST00000522556 CARD16Q5EG05 197 aa18.18■□□□□ 0.5
CLK4-211ENST00000522556 PIP5KL1Q5T9C9 394 aa18.18■□□□□ 0.5
CLK4-211ENST00000522556 PSTKQ8IV42 348 aaKnown RBP18.18■□□□□ 0.5
CLK4-211ENST00000522556 NETO1Q8TDF5 533 aa18.18■□□□□ 0.5
CLK4-211ENST00000522556 CEP44Q9C0F1 390 aa18.18■□□□□ 0.5
CLK4-211ENST00000522556 ZDHHC6Q9H6R6 413 aa18.18■□□□□ 0.5
CLK4-211ENST00000522556 LHX3Q9UBR4 397 aa18.18■□□□□ 0.5
CLK4-211ENST00000522556 IL36AQ9UHA7 158 aa18.18■□□□□ 0.5
CLK4-211ENST00000522556 HYOU1Q9Y4L1 999 aa18.18■□□□□ 0.5
CLK4-211ENST00000522556 C4orf47A7E2U8 309 aa18.17■□□□□ 0.5
CLK4-211ENST00000522556 PRR5-ARHGAP8B1AHC4 643 aa18.17■□□□□ 0.5
CLK4-211ENST00000522556 EIF3CLB5ME19 914 aaKnown RBP18.17■□□□□ 0.5
CLK4-211ENST00000522556 C1QTNF3-AMACRE9PGA6 284 aa18.17■□□□□ 0.5
CLK4-211ENST00000522556 H3BRJ5 948 aa18.17■□□□□ 0.5
CLK4-211ENST00000522556 DFFAO00273 331 aa18.17■□□□□ 0.5
CLK4-211ENST00000522556 IL4RP24394 825 aa18.17■□□□□ 0.5
CLK4-211ENST00000522556 ARHGAP8P85298 464 aa18.17■□□□□ 0.5
CLK4-211ENST00000522556 SLC20A2Q08357 652 aa18.17■□□□□ 0.5
CLK4-211ENST00000522556 MESDQ14696 234 aa18.17■□□□□ 0.5
CLK4-211ENST00000522556 CYTH1Q15438 398 aa18.17■□□□□ 0.5
CLK4-211ENST00000522556 BOLA3Q53S33 107 aa18.17■□□□□ 0.5
CLK4-211ENST00000522556 WDR45BQ5MNZ6 344 aa18.17■□□□□ 0.5
CLK4-211ENST00000522556 SYCP2LQ5T4T6 812 aa18.17■□□□□ 0.5
CLK4-211ENST00000522556 DSG4Q86SJ6 1040 aa18.17■□□□□ 0.5
CLK4-211ENST00000522556 TEKT4Q8WW24 435 aa18.17■□□□□ 0.5
CLK4-211ENST00000522556 EIF3CQ99613 913 aaKnown RBP18.17■□□□□ 0.5
CLK4-211ENST00000522556 GOLPH3Q9H4A6 298 aa18.17■□□□□ 0.5
CLK4-211ENST00000522556 HPCAL4Q9UM19 191 aa18.17■□□□□ 0.5
CLK4-211ENST00000522556 DNAH14Q0VDD8 3507 aa18.17■□□□□ 0.5
CLK4-211ENST00000522556 ANKRD36A6QL64 1941 aa18.17■□□□□ 0.5
CLK4-211ENST00000522556 CACNA1EQ15878 2313 aa18.16■□□□□ 0.5
CLK4-211ENST00000522556 SLC30A4O14863 429 aa18.16■□□□□ 0.5
CLK4-211ENST00000522556 INSIG1O15503 277 aa18.16■□□□□ 0.5
CLK4-211ENST00000522556 PLRG1O43660 514 aaKnown RBP18.16■□□□□ 0.5
CLK4-211ENST00000522556 PRAMEF11O60813 436 aa18.16■□□□□ 0.5
CLK4-211ENST00000522556 GJB3O75712 270 aa18.16■□□□□ 0.5
CLK4-211ENST00000522556 SERPINF2P08697 491 aa18.16■□□□□ 0.5
CLK4-211ENST00000522556 HOXD12P35452 270 aa18.16■□□□□ 0.5
CLK4-211ENST00000522556 RGRP47804 291 aa18.16■□□□□ 0.5
CLK4-211ENST00000522556 HCAR3P49019 387 aa18.16■□□□□ 0.5
CLK4-211ENST00000522556 NDST2P52849 883 aa18.16■□□□□ 0.5
CLK4-211ENST00000522556 CDH6P55285 790 aa18.16■□□□□ 0.5
CLK4-211ENST00000522556 RYBPQ8N488 228 aaPredicted RBP18.16■□□□□ 0.5
CLK4-211ENST00000522556 TMIEQ8NEW7 156 aa18.16■□□□□ 0.5
CLK4-211ENST00000522556 OR2T34Q8NGX1 318 aa18.16■□□□□ 0.5
CLK4-211ENST00000522556 RFFLQ8WZ73 363 aa18.16■□□□□ 0.5
CLK4-211ENST00000522556 SLC6A18Q96N87 628 aa18.16■□□□□ 0.5
CLK4-211ENST00000522556 NCAPGQ9BPX3 1015 aa18.16■□□□□ 0.5
CLK4-211ENST00000522556 HEPHQ9BQS7 1158 aa18.16■□□□□ 0.5
CLK4-211ENST00000522556 GTPBP2Q9BX10 602 aaKnown RBP18.16■□□□□ 0.5
CLK4-211ENST00000522556 NUSAP1Q9BXS6 441 aaKnown RBP18.16■□□□□ 0.5
CLK4-211ENST00000522556 PCED1AQ9H1Q7 454 aa18.16■□□□□ 0.5
CLK4-211ENST00000522556 HECAQ9UBI9 543 aaPredicted RBP18.16■□□□□ 0.5
CLK4-211ENST00000522556 SLC6A14Q9UN76 642 aa18.16■□□□□ 0.5
CLK4-211ENST00000522556 RCCD1A6NED2 376 aa18.15■□□□□ 0.5
CLK4-211ENST00000522556 KRIT1O00522 736 aa18.15■□□□□ 0.5
CLK4-211ENST00000522556 BCAT2O15382 392 aaPredicted RBP18.15■□□□□ 0.5
CLK4-211ENST00000522556 MAP3K6O95382 1288 aa18.15■□□□□ 0.5
CLK4-211ENST00000522556 PRNPP04156 253 aa18.15■□□□□ 0.5
CLK4-211ENST00000522556 FECHP22830 423 aa18.15■□□□□ 0.5
CLK4-211ENST00000522556 MAT2AP31153 395 aaKnown RBP18.15■□□□□ 0.5
CLK4-211ENST00000522556 ARL4AP40617 200 aa18.15■□□□□ 0.5
CLK4-211ENST00000522556 RECQLP46063 649 aaPredicted RBP18.15■□□□□ 0.5
CLK4-211ENST00000522556 GRIK2Q13002 908 aa18.15■□□□□ 0.5
CLK4-211ENST00000522556 DPYSL3Q14195 570 aa18.15■□□□□ 0.5
CLK4-211ENST00000522556 KRT81Q14533 505 aa18.15■□□□□ 0.5
CLK4-211ENST00000522556 LRRC73Q5JTD7 316 aa18.15■□□□□ 0.5
CLK4-211ENST00000522556 FAM46CQ5VWP2 391 aa18.15■□□□□ 0.5
CLK4-211ENST00000522556 RAD9BQ6WBX8 426 aa18.15■□□□□ 0.5
CLK4-211ENST00000522556 PARS2Q7L3T8 475 aaKnown RBP18.15■□□□□ 0.5
CLK4-211ENST00000522556 SPC24Q8NBT2 197 aa18.15■□□□□ 0.5
CLK4-211ENST00000522556 OR2AP1Q8NGE2 309 aa18.15■□□□□ 0.5
CLK4-211ENST00000522556 FAM71BQ8TC56 605 aa18.15■□□□□ 0.5
CLK4-211ENST00000522556 ISG20Q96AZ6 181 aaKnown RBP18.15■□□□□ 0.5
CLK4-211ENST00000522556 CCDC114Q96M63 670 aa18.15■□□□□ 0.5
CLK4-211ENST00000522556 TM9SF3Q9HD45 589 aa18.15■□□□□ 0.5
CLK4-211ENST00000522556 UBA2Q9UBT2 640 aaPredicted RBP18.15■□□□□ 0.5
CLK4-211ENST00000522556 GGT7Q9UJ14 662 aa18.15■□□□□ 0.5
CLK4-211ENST00000522556 REXO2Q9Y3B8 237 aaKnown RBP18.15■□□□□ 0.5
CLK4-211ENST00000522556 ASCC3Q8N3C0 2202 aaKnown RBP18.15■□□□□ 0.5
CLK4-211ENST00000522556 A0A1B0GTW7 788 aa18.14■□□□□ 0.49
CLK4-211ENST00000522556 A0A1B0GVT2 93 aa18.14■□□□□ 0.49
CLK4-211ENST00000522556 ARHGAP42A6NI28 874 aa18.14■□□□□ 0.49
CLK4-211ENST00000522556 MUSKO15146 869 aa18.14■□□□□ 0.49
CLK4-211ENST00000522556 SPINT1O43278 529 aa18.14■□□□□ 0.49
CLK4-211ENST00000522556 MFSD11O43934 449 aa18.14■□□□□ 0.49
CLK4-211ENST00000522556 MTA2O94776 668 aa18.14■□□□□ 0.49
CLK4-211ENST00000522556 LCA5LO95447 670 aa18.14■□□□□ 0.49
CLK4-211ENST00000522556 GSRP00390 522 aa18.14■□□□□ 0.49
CLK4-211ENST00000522556 UGT2B4P06133 528 aa18.14■□□□□ 0.49
CLK4-211ENST00000522556 MAN1A1P33908 653 aa18.14■□□□□ 0.49
CLK4-211ENST00000522556 ABL2P42684 1182 aa18.14■□□□□ 0.49
CLK4-211ENST00000522556 CSNK1EP49674 416 aaKnown RBP18.14■□□□□ 0.49
CLK4-211ENST00000522556 LIMK1P53667 647 aa18.14■□□□□ 0.49
CLK4-211ENST00000522556 GEMIN4P57678 1058 aaKnown RBP18.14■□□□□ 0.49
CLK4-211ENST00000522556 RHOAP61586 193 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms