RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 RETSATQ6NUM9 610 aa13.29□□□□□ -0.28
CPNE3-205ENST00000522240 HIBCHQ6NVY1 386 aaPredicted RBP13.29□□□□□ -0.28
CPNE3-205ENST00000522240 ZDHHC24Q6UX98 284 aa13.29□□□□□ -0.28
CPNE3-205ENST00000522240 PID1Q7Z2X4 250 aa13.29□□□□□ -0.28
CPNE3-205ENST00000522240 APCDD1Q8J025 514 aa13.29□□□□□ -0.28
CPNE3-205ENST00000522240 CNTD1Q8N815 330 aa13.29□□□□□ -0.28
CPNE3-205ENST00000522240 CPT1BQ92523 772 aa13.29□□□□□ -0.28
CPNE3-205ENST00000522240 ART4Q93070 314 aa13.29□□□□□ -0.28
CPNE3-205ENST00000522240 EXOC4Q96A65 974 aa13.29□□□□□ -0.28
CPNE3-205ENST00000522240 FAM122AQ96E09 287 aa13.29□□□□□ -0.28
CPNE3-205ENST00000522240 ZNF419Q96HQ0 510 aaPredicted RBP13.29□□□□□ -0.28
CPNE3-205ENST00000522240 FCRL5Q96RD9 977 aa13.29□□□□□ -0.28
CPNE3-205ENST00000522240 MGME1Q9BQP7 344 aa13.29□□□□□ -0.28
CPNE3-205ENST00000522240 CEP41Q9BYV8 373 aa13.29□□□□□ -0.28
CPNE3-205ENST00000522240 FOXP3Q9BZS1 431 aa13.29□□□□□ -0.28
CPNE3-205ENST00000522240 PHACTR1Q9C0D0 580 aa13.29□□□□□ -0.28
CPNE3-205ENST00000522240 TRPV5Q9NQA5 729 aa13.29□□□□□ -0.28
CPNE3-205ENST00000522240 ZDHHC18Q9NUE0 388 aa13.29□□□□□ -0.28
CPNE3-205ENST00000522240 RBM22Q9NW64 420 aaKnown RBP eCLIP13.29□□□□□ -0.28
CPNE3-205ENST00000522240 GOLGA6AQ9NYA3 693 aa13.29□□□□□ -0.28
CPNE3-205ENST00000522240 RSPH14Q9UHP6 348 aa13.29□□□□□ -0.28
CPNE3-205ENST00000522240 INTS6Q9UL03 887 aaKnown RBP13.29□□□□□ -0.28
CPNE3-205ENST00000522240 TCF20Q9UGU0 1960 aaKnown RBP13.29□□□□□ -0.28
CPNE3-205ENST00000522240 MUC22E2RYF6 1773 aaPredicted RBP13.28□□□□□ -0.28
CPNE3-205ENST00000522240 ERI2A8K979 691 aaKnown RBP13.28□□□□□ -0.28
CPNE3-205ENST00000522240 TP73O15350 636 aa13.28□□□□□ -0.28
CPNE3-205ENST00000522240 ZBTB24O43167 697 aaPredicted RBP13.28□□□□□ -0.28
CPNE3-205ENST00000522240 SNAP91O60641 907 aa13.28□□□□□ -0.28
CPNE3-205ENST00000522240 TULP3O75386 442 aa13.28□□□□□ -0.28
CPNE3-205ENST00000522240 ERLIN1O75477 346 aa13.28□□□□□ -0.28
CPNE3-205ENST00000522240 METTL18O95568 372 aa13.28□□□□□ -0.28
CPNE3-205ENST00000522240 ASLP04424 464 aa13.28□□□□□ -0.28
CPNE3-205ENST00000522240 CISD3P0C7P0 127 aa13.28□□□□□ -0.28
CPNE3-205ENST00000522240 NFKB1P19838 968 aa13.28□□□□□ -0.28
CPNE3-205ENST00000522240 SERPINH1P50454 418 aaKnown RBP13.28□□□□□ -0.28
CPNE3-205ENST00000522240 SLC10A7Q0GE19 358 aa13.28□□□□□ -0.28
CPNE3-205ENST00000522240 EIF4HQ15056 248 aaKnown RBP13.28□□□□□ -0.28
CPNE3-205ENST00000522240 ITPRIPL2Q3MIP1 535 aa13.28□□□□□ -0.28
CPNE3-205ENST00000522240 PREPLQ4J6C6 727 aaPredicted RBP13.28□□□□□ -0.28
CPNE3-205ENST00000522240 GRAMD4Q6IC98 578 aa13.28□□□□□ -0.28
CPNE3-205ENST00000522240 PPP1R21Q6ZMI0 780 aa13.28□□□□□ -0.28
CPNE3-205ENST00000522240 CCNI2Q6ZMN8 369 aaPredicted RBP13.28□□□□□ -0.28
CPNE3-205ENST00000522240 C12orf40Q86WS4 652 aa13.28□□□□□ -0.28
CPNE3-205ENST00000522240 NAT8LQ8N9F0 302 aa13.28□□□□□ -0.28
CPNE3-205ENST00000522240 FBXO25Q8TCJ0 367 aa13.28□□□□□ -0.28
CPNE3-205ENST00000522240 USP33Q8TEY7 942 aa13.28□□□□□ -0.28
CPNE3-205ENST00000522240 IFT81Q8WYA0 676 aa13.28□□□□□ -0.28
CPNE3-205ENST00000522240 PRCCQ92733 491 aaPredicted RBP13.28□□□□□ -0.28
CPNE3-205ENST00000522240 AGAP3Q96P47 875 aa13.28□□□□□ -0.28
CPNE3-205ENST00000522240 PSKH2Q96QS6 385 aa13.28□□□□□ -0.28
CPNE3-205ENST00000522240 FMO2Q99518 471 aa13.28□□□□□ -0.28
CPNE3-205ENST00000522240 CINPQ9BW66 212 aaPredicted RBP13.28□□□□□ -0.28
CPNE3-205ENST00000522240 FRMD8Q9BZ67 464 aaPredicted RBP13.28□□□□□ -0.28
CPNE3-205ENST00000522240 POLR1EQ9GZS1 481 aaKnown RBP13.28□□□□□ -0.28
CPNE3-205ENST00000522240 BRD9Q9H8M2 597 aa13.28□□□□□ -0.28
CPNE3-205ENST00000522240 ETNK1Q9HBU6 452 aa13.28□□□□□ -0.28
CPNE3-205ENST00000522240 GLOD4Q9HC38 313 aa13.28□□□□□ -0.28
CPNE3-205ENST00000522240 NT5MQ9NPB1 228 aa13.28□□□□□ -0.28
CPNE3-205ENST00000522240 ARGLU1Q9NWB6 273 aaPredicted RBP13.28□□□□□ -0.28
CPNE3-205ENST00000522240 MTRF1LQ9UGC7 380 aaKnown RBP13.28□□□□□ -0.28
CPNE3-205ENST00000522240 ANAPC5Q9UJX4 755 aa13.28□□□□□ -0.28
CPNE3-205ENST00000522240 HS3ST2Q9Y278 367 aa13.28□□□□□ -0.28
CPNE3-205ENST00000522240 MYOFQ9NZM1 2061 aa13.28□□□□□ -0.28
CPNE3-205ENST00000522240 TICRRQ7Z2Z1 1910 aa13.27□□□□□ -0.28
CPNE3-205ENST00000522240 OTOL1A6NHN0 477 aaPredicted RBP13.27□□□□□ -0.29
CPNE3-205ENST00000522240 DYNC1I1O14576 645 aa13.27□□□□□ -0.29
CPNE3-205ENST00000522240 PSMD3O43242 534 aa13.27□□□□□ -0.29
CPNE3-205ENST00000522240 ANXA9O76027 345 aa13.27□□□□□ -0.29
CPNE3-205ENST00000522240 TMCC1O94876 653 aa13.27□□□□□ -0.29
CPNE3-205ENST00000522240 CD160O95971 181 aa13.27□□□□□ -0.29
CPNE3-205ENST00000522240 MYBL2P10244 700 aa13.27□□□□□ -0.29
CPNE3-205ENST00000522240 SP100P23497 879 aaPredicted RBP13.27□□□□□ -0.29
CPNE3-205ENST00000522240 GJA4P35212 333 aa13.27□□□□□ -0.29
CPNE3-205ENST00000522240 PRPSAP1Q14558 356 aa13.27□□□□□ -0.29
CPNE3-205ENST00000522240 TRADDQ15628 312 aa13.27□□□□□ -0.29
CPNE3-205ENST00000522240 KCTD19Q17RG1 926 aaPredicted RBP13.27□□□□□ -0.29
CPNE3-205ENST00000522240 RALGPS1Q5JS13 557 aa13.27□□□□□ -0.29
CPNE3-205ENST00000522240 PTCRAQ6ISU1 281 aaPredicted RBP13.27□□□□□ -0.29
CPNE3-205ENST00000522240 EMBQ6PCB8 327 aa13.27□□□□□ -0.29
CPNE3-205ENST00000522240 CEP128Q6ZU80 1094 aa13.27□□□□□ -0.29
CPNE3-205ENST00000522240 ADIPOR2Q86V24 386 aa13.27□□□□□ -0.29
CPNE3-205ENST00000522240 PHTF2Q8N3S3 785 aa13.27□□□□□ -0.29
CPNE3-205ENST00000522240 DNASE1L2Q92874 299 aa13.27□□□□□ -0.29
CPNE3-205ENST00000522240 TTC17Q96AE7 1141 aa13.27□□□□□ -0.29
CPNE3-205ENST00000522240 NECAB3Q96P71 396 aaPredicted RBP13.27□□□□□ -0.29
CPNE3-205ENST00000522240 GORASP1Q9BQQ3 440 aa13.27□□□□□ -0.29
CPNE3-205ENST00000522240 RPP25Q9BUL9 199 aaKnown RBP13.27□□□□□ -0.29
CPNE3-205ENST00000522240 TSPYL1Q9H0U9 437 aa13.27□□□□□ -0.29
CPNE3-205ENST00000522240 SLC25A51Q9H1U9 297 aa13.27□□□□□ -0.29
CPNE3-205ENST00000522240 NEUROG2Q9H2A3 272 aa13.27□□□□□ -0.29
CPNE3-205ENST00000522240 DEC1Q9P2X7 70 aa13.27□□□□□ -0.29
CPNE3-205ENST00000522240 SLC25A13Q9UJS0 675 aa13.27□□□□□ -0.29
CPNE3-205ENST00000522240 NFU1Q9UMS0 254 aa13.27□□□□□ -0.29
CPNE3-205ENST00000522240 AAR2Q9Y312 384 aaKnown RBP13.27□□□□□ -0.29
CPNE3-205ENST00000522240 MUC6Q6W4X9 2439 aa13.27□□□□□ -0.29
CPNE3-205ENST00000522240 E7EVH7 732 aa13.26□□□□□ -0.29
CPNE3-205ENST00000522240 TMEM63AO94886 807 aa13.26□□□□□ -0.29
CPNE3-205ENST00000522240 AP2A1O95782 977 aa13.26□□□□□ -0.29
CPNE3-205ENST00000522240 H2AFXP16104 143 aaPredicted RBP13.26□□□□□ -0.29
CPNE3-205ENST00000522240 CES1P23141 567 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms