RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 SLC27A6Q9Y2P4 619 aa21.72■■□□□ 1.07
R3HCC1-208ENST00000522012 FCF1Q9Y324 198 aaKnown RBP21.72■■□□□ 1.07
R3HCC1-208ENST00000522012 TTC24A2A3L6 582 aaPredicted RBP21.71■■□□□ 1.07
R3HCC1-208ENST00000522012 K7ERQ8 282 aa21.71■■□□□ 1.07
R3HCC1-208ENST00000522012 SMAPO00193 183 aa21.71■■□□□ 1.07
R3HCC1-208ENST00000522012 ARNTLO00327 626 aa21.71■■□□□ 1.07
R3HCC1-208ENST00000522012 MUSKO15146 869 aa21.71■■□□□ 1.07
R3HCC1-208ENST00000522012 TMEM63AO94886 807 aa21.71■■□□□ 1.07
R3HCC1-208ENST00000522012 H2AFXP16104 143 aaPredicted RBP21.71■■□□□ 1.07
R3HCC1-208ENST00000522012 MAGEA6P43360 314 aa21.71■■□□□ 1.07
R3HCC1-208ENST00000522012 SERPINH1P50454 418 aaKnown RBP21.71■■□□□ 1.07
R3HCC1-208ENST00000522012 ECT2LQ008S8 904 aa21.71■■□□□ 1.07
R3HCC1-208ENST00000522012 DSC2Q02487 901 aa21.71■■□□□ 1.07
R3HCC1-208ENST00000522012 KDSRQ06136 332 aa21.71■■□□□ 1.07
R3HCC1-208ENST00000522012 SULT2A1Q06520 285 aa21.71■■□□□ 1.07
R3HCC1-208ENST00000522012 SLC20A2Q08357 652 aa21.71■■□□□ 1.07
R3HCC1-208ENST00000522012 FBXO38Q6PIJ6 1188 aa21.71■■□□□ 1.07
R3HCC1-208ENST00000522012 WFIKKN2Q8TEU8 576 aa21.71■■□□□ 1.07
R3HCC1-208ENST00000522012 AENQ8WTP8 325 aaKnown RBP21.71■■□□□ 1.07
R3HCC1-208ENST00000522012 RPL10LQ96L21 214 aaKnown RBP21.71■■□□□ 1.07
R3HCC1-208ENST00000522012 SLC25A13Q9UJS0 675 aa21.71■■□□□ 1.07
R3HCC1-208ENST00000522012 FAM50BQ9Y247 325 aa21.71■■□□□ 1.07
R3HCC1-208ENST00000522012 EYSQ5T1H1 3165 aa21.71■■□□□ 1.07
R3HCC1-208ENST00000522012 GOLGA6CA6NDK9 693 aa21.7■■□□□ 1.07
R3HCC1-208ENST00000522012 GOLGA6BA6NDN3 693 aa21.7■■□□□ 1.07
R3HCC1-208ENST00000522012 ANXA9O76027 345 aa21.7■■□□□ 1.07
R3HCC1-208ENST00000522012 GOLGA6DP0CG33 693 aa21.7■■□□□ 1.07
R3HCC1-208ENST00000522012 TPSB2P20231 275 aa21.7■■□□□ 1.07
R3HCC1-208ENST00000522012 TFF2Q03403 129 aa21.7■■□□□ 1.07
R3HCC1-208ENST00000522012 NIPAL4Q0D2K0 466 aa21.7■■□□□ 1.07
R3HCC1-208ENST00000522012 SPARCL1Q14515 664 aa21.7■■□□□ 1.07
R3HCC1-208ENST00000522012 TPSAB1Q15661 275 aa21.7■■□□□ 1.07
R3HCC1-208ENST00000522012 PUS10Q3MIT2 529 aaKnown RBP21.7■■□□□ 1.07
R3HCC1-208ENST00000522012 TMEM215Q68D42 235 aa21.7■■□□□ 1.07
R3HCC1-208ENST00000522012 CCDC25Q86WR0 208 aa21.7■■□□□ 1.07
R3HCC1-208ENST00000522012 ZCCHC9Q8N567 271 aaKnown RBP21.7■■□□□ 1.07
R3HCC1-208ENST00000522012 TTC17Q96AE7 1141 aa21.7■■□□□ 1.07
R3HCC1-208ENST00000522012 OXNAD1Q96HP4 312 aaPredicted RBP21.7■■□□□ 1.07
R3HCC1-208ENST00000522012 GDAP1L1Q96MZ0 367 aa21.7■■□□□ 1.07
R3HCC1-208ENST00000522012 PPP1R2P1Q96PQ5 205 aa21.7■■□□□ 1.07
R3HCC1-208ENST00000522012 RBM15Q96T37 977 aaKnown RBP eCLIP21.7■■□□□ 1.07
R3HCC1-208ENST00000522012 SEMA3CQ99985 751 aa21.7■■□□□ 1.07
R3HCC1-208ENST00000522012 MLPHQ9BV36 600 aaPredicted RBP21.7■■□□□ 1.07
R3HCC1-208ENST00000522012 CIPCQ9C0C6 399 aa21.7■■□□□ 1.07
R3HCC1-208ENST00000522012 EIF2B3Q9NR50 452 aaKnown RBP21.7■■□□□ 1.07
R3HCC1-208ENST00000522012 GOLGA6AQ9NYA3 693 aa21.7■■□□□ 1.07
R3HCC1-208ENST00000522012 AAR2Q9Y312 384 aaKnown RBP21.7■■□□□ 1.07
R3HCC1-208ENST00000522012 NUP205Q92621 2012 aa21.7■■□□□ 1.07
R3HCC1-208ENST00000522012 SMAD6O43541 496 aaKnown RBP21.7■■□□□ 1.06
R3HCC1-208ENST00000522012 MT-CYBP00156 380 aaPredicted RBP21.7■■□□□ 1.06
R3HCC1-208ENST00000522012 OPRD1P41143 372 aa21.7■■□□□ 1.06
R3HCC1-208ENST00000522012 CD86P42081 329 aa21.7■■□□□ 1.06
R3HCC1-208ENST00000522012 STK19P49842 368 aaPredicted RBP21.7■■□□□ 1.06
R3HCC1-208ENST00000522012 GEMP55040 296 aa21.7■■□□□ 1.06
R3HCC1-208ENST00000522012 RHOAP61586 193 aa21.7■■□□□ 1.06
R3HCC1-208ENST00000522012 NAIF1Q69YI7 327 aaPredicted RBP21.7■■□□□ 1.06
R3HCC1-208ENST00000522012 EMBQ6PCB8 327 aa21.7■■□□□ 1.06
R3HCC1-208ENST00000522012 RNF135Q8IUD6 432 aa21.7■■□□□ 1.06
R3HCC1-208ENST00000522012 SLC44A3Q8N4M1 653 aa21.7■■□□□ 1.06
R3HCC1-208ENST00000522012 ANKRD7Q92527 254 aa21.7■■□□□ 1.06
R3HCC1-208ENST00000522012 NXPE3Q969Y0 559 aa21.7■■□□□ 1.06
R3HCC1-208ENST00000522012 IMP4Q96G21 291 aaKnown RBP21.7■■□□□ 1.06
R3HCC1-208ENST00000522012 EXOC2Q96KP1 924 aa21.7■■□□□ 1.06
R3HCC1-208ENST00000522012 MGME1Q9BQP7 344 aa21.7■■□□□ 1.06
R3HCC1-208ENST00000522012 CXorf51AA0A1B0GTR3 108 aa21.69■■□□□ 1.06
R3HCC1-208ENST00000522012 PSMD3O43242 534 aa21.69■■□□□ 1.06
R3HCC1-208ENST00000522012 GJB3O75712 270 aa21.69■■□□□ 1.06
R3HCC1-208ENST00000522012 HSPA9P38646 679 aaKnown RBP21.69■■□□□ 1.06
R3HCC1-208ENST00000522012 RGRP47804 291 aa21.69■■□□□ 1.06
R3HCC1-208ENST00000522012 SARNPP82979 210 aaKnown RBP21.69■■□□□ 1.06
R3HCC1-208ENST00000522012 CDK16Q00536 496 aa21.69■■□□□ 1.06
R3HCC1-208ENST00000522012 MESP2Q0VG99 397 aa21.69■■□□□ 1.06
R3HCC1-208ENST00000522012 METTL3Q86U44 580 aaKnown RBP21.69■■□□□ 1.06
R3HCC1-208ENST00000522012 PRPF39Q86UA1 669 aaKnown RBP21.69■■□□□ 1.06
R3HCC1-208ENST00000522012 ARRDC2Q8TBH0 407 aa21.69■■□□□ 1.06
R3HCC1-208ENST00000522012 CYB5D2Q8WUJ1 264 aa21.69■■□□□ 1.06
R3HCC1-208ENST00000522012 HNRNPLLQ8WVV9 542 aaKnown RBP21.69■■□□□ 1.06
R3HCC1-208ENST00000522012 SORCS1Q8WY21 1168 aa21.69■■□□□ 1.06
R3HCC1-208ENST00000522012 FOXP3Q9BZS1 431 aa21.69■■□□□ 1.06
R3HCC1-208ENST00000522012 PRDM6Q9NQX0 595 aa21.69■■□□□ 1.06
R3HCC1-208ENST00000522012 LHX3Q9UBR4 397 aa21.69■■□□□ 1.06
R3HCC1-208ENST00000522012 ERVW-1Q9UQF0 538 aa21.69■■□□□ 1.06
R3HCC1-208ENST00000522012 DOCK8Q8NF50 2099 aa21.68■■□□□ 1.06
R3HCC1-208ENST00000522012 ERI2A8K979 691 aaKnown RBP21.68■■□□□ 1.06
R3HCC1-208ENST00000522012 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.68■■□□□ 1.06
R3HCC1-208ENST00000522012 PMPCBO75439 489 aa21.68■■□□□ 1.06
R3HCC1-208ENST00000522012 AP2A1O95782 977 aa21.68■■□□□ 1.06
R3HCC1-208ENST00000522012 ATP5BP06576 529 aaKnown RBP21.68■■□□□ 1.06
R3HCC1-208ENST00000522012 ASGR2P07307 311 aa21.68■■□□□ 1.06
R3HCC1-208ENST00000522012 SRCP12931 536 aa21.68■■□□□ 1.06
R3HCC1-208ENST00000522012 IL9P15248 144 aa21.68■■□□□ 1.06
R3HCC1-208ENST00000522012 TNNT3P45378 269 aaPredicted RBP21.68■■□□□ 1.06
R3HCC1-208ENST00000522012 SOX9P48436 509 aa21.68■■□□□ 1.06
R3HCC1-208ENST00000522012 SCNN1BP51168 640 aa21.68■■□□□ 1.06
R3HCC1-208ENST00000522012 ARL4CP56559 192 aa21.68■■□□□ 1.06
R3HCC1-208ENST00000522012 ACCSLQ4AC99 568 aa21.68■■□□□ 1.06
R3HCC1-208ENST00000522012 PPP1R21Q6ZMI0 780 aa21.68■■□□□ 1.06
R3HCC1-208ENST00000522012 MCUQ8NE86 351 aa21.68■■□□□ 1.06
R3HCC1-208ENST00000522012 IPMKQ8NFU5 416 aa21.68■■□□□ 1.06
R3HCC1-208ENST00000522012 LRRC40Q9H9A6 602 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms