RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 ARNT2Q9HBZ2 717 aa18.74■□□□□ 0.59
TRAPPC9-210ENST00000521667 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.74■□□□□ 0.59
TRAPPC9-210ENST00000521667 GKN1Q9NS71 199 aa18.74■□□□□ 0.59
TRAPPC9-210ENST00000521667 IARS2Q9NSE4 1012 aaKnown RBP18.74■□□□□ 0.59
TRAPPC9-210ENST00000521667 ABCF3Q9NUQ8 709 aa18.74■□□□□ 0.59
TRAPPC9-210ENST00000521667 INSL5Q9Y5Q6 135 aa18.74■□□□□ 0.59
TRAPPC9-210ENST00000521667 CCDC78A2IDD5 438 aa18.73■□□□□ 0.59
TRAPPC9-210ENST00000521667 C2orf78A6NCI8 922 aa18.73■□□□□ 0.59
TRAPPC9-210ENST00000521667 GLRA3O75311 464 aa18.73■□□□□ 0.59
TRAPPC9-210ENST00000521667 KLKB1P03952 638 aa18.73■□□□□ 0.59
TRAPPC9-210ENST00000521667 MMP2P08253 660 aa18.73■□□□□ 0.59
TRAPPC9-210ENST00000521667 BGNP21810 368 aa18.73■□□□□ 0.59
TRAPPC9-210ENST00000521667 LIG3P49916 1009 aa18.73■□□□□ 0.59
TRAPPC9-210ENST00000521667 EPHB3P54753 998 aa18.73■□□□□ 0.59
TRAPPC9-210ENST00000521667 CSE1LP55060 971 aaKnown RBP18.73■□□□□ 0.59
TRAPPC9-210ENST00000521667 DSC2Q02487 901 aa18.73■□□□□ 0.59
TRAPPC9-210ENST00000521667 SPRED3Q2MJR0 410 aa18.73■□□□□ 0.59
TRAPPC9-210ENST00000521667 TMCO4Q5TGY1 634 aa18.73■□□□□ 0.59
TRAPPC9-210ENST00000521667 KYAT3Q6YP21 454 aaKnown RBP18.73■□□□□ 0.59
TRAPPC9-210ENST00000521667 ATP2A3Q93084 1043 aa18.73■□□□□ 0.59
TRAPPC9-210ENST00000521667 ISL2Q96A47 359 aa18.73■□□□□ 0.59
TRAPPC9-210ENST00000521667 PRICKLE1Q96MT3 831 aaPredicted RBP18.73■□□□□ 0.59
TRAPPC9-210ENST00000521667 KLF16Q9BXK1 252 aaPredicted RBP18.73■□□□□ 0.59
TRAPPC9-210ENST00000521667 MAGEH1Q9H213 219 aa18.73■□□□□ 0.59
TRAPPC9-210ENST00000521667 ATP13A1Q9HD20 1204 aa18.73■□□□□ 0.59
TRAPPC9-210ENST00000521667 NSMCE4AQ9NXX6 385 aa18.73■□□□□ 0.59
TRAPPC9-210ENST00000521667 UXTQ9UBK9 157 aaPredicted RBP18.73■□□□□ 0.59
TRAPPC9-210ENST00000521667 MAFFQ9ULX9 164 aa18.73■□□□□ 0.59
TRAPPC9-210ENST00000521667 KLF11O14901 512 aa18.73■□□□□ 0.59
TRAPPC9-210ENST00000521667 TYK2P29597 1187 aa18.73■□□□□ 0.59
TRAPPC9-210ENST00000521667 ETFBP38117 255 aa18.73■□□□□ 0.59
TRAPPC9-210ENST00000521667 CHRNA4P43681 627 aa18.73■□□□□ 0.59
TRAPPC9-210ENST00000521667 FYB2Q5VWT5 728 aa18.73■□□□□ 0.59
TRAPPC9-210ENST00000521667 ARMC3Q5W041 872 aa18.73■□□□□ 0.59
TRAPPC9-210ENST00000521667 OTOP2Q7RTS6 562 aa18.73■□□□□ 0.59
TRAPPC9-210ENST00000521667 UBE2Q1Q7Z7E8 422 aa18.73■□□□□ 0.59
TRAPPC9-210ENST00000521667 TRIM42Q8IWZ5 723 aa18.73■□□□□ 0.59
TRAPPC9-210ENST00000521667 GPR65Q8IYL9 337 aa18.73■□□□□ 0.59
TRAPPC9-210ENST00000521667 PGBD5Q8N414 524 aa18.73■□□□□ 0.59
TRAPPC9-210ENST00000521667 DCLK2Q8N568 766 aa18.73■□□□□ 0.59
TRAPPC9-210ENST00000521667 TSSK1BQ9BXA7 367 aa18.73■□□□□ 0.59
TRAPPC9-210ENST00000521667 PDFQ9HBH1 243 aa18.73■□□□□ 0.59
TRAPPC9-210ENST00000521667 DCDC2Q9UHG0 476 aa18.73■□□□□ 0.59
TRAPPC9-210ENST00000521667 ALPK3Q96L96 1907 aa18.72■□□□□ 0.59
TRAPPC9-210ENST00000521667 H3BNC9 293 aa18.72■□□□□ 0.59
TRAPPC9-210ENST00000521667 TEX28O15482 410 aa18.72■□□□□ 0.59
TRAPPC9-210ENST00000521667 TIMM44O43615 452 aa18.72■□□□□ 0.59
TRAPPC9-210ENST00000521667 FSBPO95073 299 aa18.72■□□□□ 0.59
TRAPPC9-210ENST00000521667 TOP3BO95985 862 aaKnown RBP18.72■□□□□ 0.59
TRAPPC9-210ENST00000521667 MAGEA9P43362 315 aa18.72■□□□□ 0.59
TRAPPC9-210ENST00000521667 MAGEA12P43365 314 aa18.72■□□□□ 0.59
TRAPPC9-210ENST00000521667 SERPINB8P50452 374 aa18.72■□□□□ 0.59
TRAPPC9-210ENST00000521667 RPS24P62847 133 aaKnown RBP18.72■□□□□ 0.59
TRAPPC9-210ENST00000521667 GNA12Q03113 381 aa18.72■□□□□ 0.59
TRAPPC9-210ENST00000521667 FSTL4Q6MZW2 842 aa18.72■□□□□ 0.59
TRAPPC9-210ENST00000521667 C10orf67Q8IYJ2 551 aa18.72■□□□□ 0.59
TRAPPC9-210ENST00000521667 ARRDC2Q8TBH0 407 aa18.72■□□□□ 0.59
TRAPPC9-210ENST00000521667 TADA1Q96BN2 335 aa18.72■□□□□ 0.59
TRAPPC9-210ENST00000521667 THOC1Q96FV9 657 aaKnown RBP18.72■□□□□ 0.59
TRAPPC9-210ENST00000521667 RMDN2Q96LZ7 410 aa18.72■□□□□ 0.59
TRAPPC9-210ENST00000521667 ZNF599Q96NL3 588 aa18.72■□□□□ 0.59
TRAPPC9-210ENST00000521667 MCMBPQ9BTE3 642 aa18.72■□□□□ 0.59
TRAPPC9-210ENST00000521667 SNX15Q9NRS6 342 aa18.72■□□□□ 0.59
TRAPPC9-210ENST00000521667 HAUS2Q9NVX0 235 aa18.72■□□□□ 0.59
TRAPPC9-210ENST00000521667 PCDHB12Q9Y5F1 795 aa18.72■□□□□ 0.59
TRAPPC9-210ENST00000521667 A0A0D9SEW6 157 aa18.71■□□□□ 0.59
TRAPPC9-210ENST00000521667 GOLGA8TH3BQL2 631 aa18.71■□□□□ 0.59
TRAPPC9-210ENST00000521667 CLDN11O75508 207 aa18.71■□□□□ 0.59
TRAPPC9-210ENST00000521667 IRF1P10914 325 aa18.71■□□□□ 0.59
TRAPPC9-210ENST00000521667 CREMQ03060 361 aa18.71■□□□□ 0.59
TRAPPC9-210ENST00000521667 ACTN3Q08043 901 aaPredicted RBP18.71■□□□□ 0.59
TRAPPC9-210ENST00000521667 ESRP1Q6NXG1 681 aaKnown RBP18.71■□□□□ 0.59
TRAPPC9-210ENST00000521667 SLC25A41Q8N5S1 370 aa18.71■□□□□ 0.59
TRAPPC9-210ENST00000521667 ATXN7L3BQ96GX2 97 aa18.71■□□□□ 0.59
TRAPPC9-210ENST00000521667 MECRQ9BV79 373 aa18.71■□□□□ 0.59
TRAPPC9-210ENST00000521667 PRKD2Q9BZL6 878 aa18.71■□□□□ 0.59
TRAPPC9-210ENST00000521667 POLR1EQ9GZS1 481 aaKnown RBP18.71■□□□□ 0.59
TRAPPC9-210ENST00000521667 SIRPGQ9P1W8 387 aa18.71■□□□□ 0.59
TRAPPC9-210ENST00000521667 STK39Q9UEW8 545 aa18.71■□□□□ 0.59
TRAPPC9-210ENST00000521667 GGT7Q9UJ14 662 aa18.71■□□□□ 0.59
TRAPPC9-210ENST00000521667 AGO1Q9UL18 857 aaKnown RBP18.71■□□□□ 0.59
TRAPPC9-210ENST00000521667 BIRC5O15392 142 aa18.71■□□□□ 0.59
TRAPPC9-210ENST00000521667 LILRB3O75022 631 aa18.71■□□□□ 0.59
TRAPPC9-210ENST00000521667 IL1BP01584 269 aa18.71■□□□□ 0.59
TRAPPC9-210ENST00000521667 TROVE2P10155 538 aaKnown RBP eCLIP18.71■□□□□ 0.59
TRAPPC9-210ENST00000521667 ZNF235Q14590 738 aa18.71■□□□□ 0.59
TRAPPC9-210ENST00000521667 IHHQ14623 411 aa18.71■□□□□ 0.59
TRAPPC9-210ENST00000521667 INSCQ1MX18 579 aa18.71■□□□□ 0.59
TRAPPC9-210ENST00000521667 ADGRF1Q5T601 910 aa18.71■□□□□ 0.59
TRAPPC9-210ENST00000521667 TMEM150AQ86TG1 271 aa18.71■□□□□ 0.59
TRAPPC9-210ENST00000521667 RXFP1Q9HBX9 757 aa18.71■□□□□ 0.59
TRAPPC9-210ENST00000521667 IL23AQ9NPF7 189 aa18.71■□□□□ 0.59
TRAPPC9-210ENST00000521667 TREX1Q9NSU2 369 aa18.71■□□□□ 0.59
TRAPPC9-210ENST00000521667 MTO1Q9Y2Z2 717 aaKnown RBP18.71■□□□□ 0.59
TRAPPC9-210ENST00000521667 USH1CQ9Y6N9 552 aa18.71■□□□□ 0.59
TRAPPC9-210ENST00000521667 FGF18O76093 207 aa18.7■□□□□ 0.58
TRAPPC9-210ENST00000521667 VAPBO95292 243 aa18.7■□□□□ 0.58
TRAPPC9-210ENST00000521667 BPGMP07738 259 aa18.7■□□□□ 0.58
TRAPPC9-210ENST00000521667 F7P08709 466 aaPredicted RBP18.7■□□□□ 0.58
TRAPPC9-210ENST00000521667 PAMP19021 973 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms